BLASTX nr result

ID: Scutellaria24_contig00021440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00021440
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004167135.1| PREDICTED: RING-H2 finger protein ATL13-like...    57   2e-06
ref|XP_004149896.1| PREDICTED: RING-H2 finger protein ATL13-like...    56   3e-06

>ref|XP_004167135.1| PREDICTED: RING-H2 finger protein ATL13-like [Cucumis sativus]
          Length = 466

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 36/89 (40%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
 Frame = +3

Query: 21  VSSHLGSIYSEDNDDFGL----GYEDEMG-VKENEISREKVVSIKLGKYRRXXXXXXXXX 185
           +S+H   I S  N   G     G+E     + + E S   VV++KLGKY+          
Sbjct: 208 ISNHTNQI-SGSNSQMGFVGDGGFEGGSSEITKLEDSNATVVTVKLGKYKNVDAGESGSS 266

Query: 186 XXXXXXARRCFSMGSFAYVMDDNSSLKVA 272
                 +RRCFSMGSF YVMD+NSS+KVA
Sbjct: 267 ENKNVDSRRCFSMGSFEYVMDENSSVKVA 295


>ref|XP_004149896.1| PREDICTED: RING-H2 finger protein ATL13-like [Cucumis sativus]
          Length = 466

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 35/89 (39%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
 Frame = +3

Query: 21  VSSHLGSIYSEDNDDFGL----GYEDEMG-VKENEISREKVVSIKLGKYRRXXXXXXXXX 185
           +++H   I S  N   G     G+E     + + E S   VV++KLGKY+          
Sbjct: 208 ITNHTNQI-SGSNSQMGFVGDGGFEGGSSEITKLEDSNATVVTVKLGKYKNVDAGESGSS 266

Query: 186 XXXXXXARRCFSMGSFAYVMDDNSSLKVA 272
                 +RRCFSMGSF YVMD+NSS+KVA
Sbjct: 267 ENKNVDSRRCFSMGSFEYVMDENSSVKVA 295


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