BLASTX nr result

ID: Scutellaria24_contig00021376 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00021376
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527682.1| 3-5 exonuclease, putative [Ricinus communis]...   139   3e-31
emb|CBI32833.3| unnamed protein product [Vitis vinifera]              131   6e-29
emb|CAN60287.1| hypothetical protein VITISV_011782 [Vitis vinifera]   131   6e-29
dbj|BAK05990.1| predicted protein [Hordeum vulgare subsp. vulgare]    129   2e-28
ref|XP_002278250.1| PREDICTED: Werner Syndrome-like exonuclease ...   129   3e-28

>ref|XP_002527682.1| 3-5 exonuclease, putative [Ricinus communis]
           gi|223532913|gb|EEF34681.1| 3-5 exonuclease, putative
           [Ricinus communis]
          Length = 211

 Score =  139 bits (349), Expect = 3e-31
 Identities = 70/135 (51%), Positives = 93/135 (68%)
 Frame = -1

Query: 409 QNPAATLQLCIGRCCLIYQLIHSPYFPLQLIQFLSYSDHKFVGIEVKSDLHKLQQDHRIG 230
           +NP ATLQLCIG  CLIYQLIHSP  P  L  FL  S + F G+ ++SD+ KL +D+ + 
Sbjct: 72  ENPVATLQLCIGSRCLIYQLIHSPRIPQSLFDFLKNSSYVFAGVGIESDVEKLVEDYGLS 131

Query: 229 YNAKTVDLRRLAVDAYKMKDLKHAGLKSLARMVLGKEMVKPKWVTRSAWDDRRLTADQVH 50
                ++LRR+A ++  +K+LK+AGLK L + VLGKE+ KPK VT S WD   L+ DQV 
Sbjct: 132 VG-NVMELRRVAAESLGVKELKNAGLKELVKQVLGKEIQKPKRVTMSRWDSMWLSHDQVQ 190

Query: 49  YACIDAYVSFCGKIG 5
           YAC+DA+V  C +IG
Sbjct: 191 YACLDAFV--CSEIG 203


>emb|CBI32833.3| unnamed protein product [Vitis vinifera]
          Length = 208

 Score =  131 bits (329), Expect = 6e-29
 Identities = 65/129 (50%), Positives = 87/129 (67%)
 Frame = -1

Query: 406 NPAATLQLCIGRCCLIYQLIHSPYFPLQLIQFLSYSDHKFVGIEVKSDLHKLQQDHRIGY 227
           NP A LQLC+GR CLI+QL+++P  P  LI FL  +D+ FVG+ +++D  KL  DH +  
Sbjct: 70  NPVAILQLCVGRRCLIFQLLYAPEIPTSLIDFLGDTDYTFVGVGIQADSQKLLNDHNLRV 129

Query: 226 NAKTVDLRRLAVDAYKMKDLKHAGLKSLARMVLGKEMVKPKWVTRSAWDDRRLTADQVHY 47
               VDL  LA      ++L++AG+K LAR VLG+E+ KPK V RS WD   L+  QVHY
Sbjct: 130 G-NVVDLAVLAARVLNTRELRNAGIKRLAREVLGREVEKPKHVARSRWDTDWLSDAQVHY 188

Query: 46  ACIDAYVSF 20
           AC+DA+VSF
Sbjct: 189 ACVDAFVSF 197


>emb|CAN60287.1| hypothetical protein VITISV_011782 [Vitis vinifera]
          Length = 208

 Score =  131 bits (329), Expect = 6e-29
 Identities = 65/129 (50%), Positives = 87/129 (67%)
 Frame = -1

Query: 406 NPAATLQLCIGRCCLIYQLIHSPYFPLQLIQFLSYSDHKFVGIEVKSDLHKLQQDHRIGY 227
           NP A LQLC+GR CLI+QL+++P  P  LI FL  +D+ FVG+ +++D  KL  DH +  
Sbjct: 70  NPVAILQLCVGRRCLIFQLLYAPEIPTSLIDFLGDTDYTFVGVGIQADSQKLLNDHNLRV 129

Query: 226 NAKTVDLRRLAVDAYKMKDLKHAGLKSLARMVLGKEMVKPKWVTRSAWDDRRLTADQVHY 47
               VDL  LA      ++L++AG+K LAR VLG+E+ KPK V RS WD   L+  QVHY
Sbjct: 130 G-NVVDLAVLAARVLNTRELRNAGIKRLAREVLGREVEKPKHVARSRWDTDWLSDAQVHY 188

Query: 46  ACIDAYVSF 20
           AC+DA+VSF
Sbjct: 189 ACVDAFVSF 197


>dbj|BAK05990.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 212

 Score =  129 bits (325), Expect = 2e-28
 Identities = 64/130 (49%), Positives = 89/130 (68%)
 Frame = -1

Query: 409 QNPAATLQLCIGRCCLIYQLIHSPYFPLQLIQFLSYSDHKFVGIEVKSDLHKLQQDHRIG 230
           QNP A LQLC+GR CLI+QL+H+ + PL L +FL+  D +FVG+ V++D+ +L  DH + 
Sbjct: 62  QNPVALLQLCVGRRCLIFQLLHADFIPLALRRFLADPDFRFVGVGVQNDVDRLNDDHGLE 121

Query: 229 YNAKTVDLRRLAVDAYKMKDLKHAGLKSLARMVLGKEMVKPKWVTRSAWDDRRLTADQVH 50
             A  VDLR LA D  +   L+ AGLK +A +V+G  + KP+ VT   WD  RL+ +Q+ 
Sbjct: 122 V-ANVVDLRSLAADEMRRPWLRQAGLKDVAGVVMGANLHKPRRVTMGPWDACRLSQEQIQ 180

Query: 49  YACIDAYVSF 20
           YACIDA+VSF
Sbjct: 181 YACIDAFVSF 190


>ref|XP_002278250.1| PREDICTED: Werner Syndrome-like exonuclease [Vitis vinifera]
          Length = 213

 Score =  129 bits (323), Expect = 3e-28
 Identities = 65/129 (50%), Positives = 85/129 (65%)
 Frame = -1

Query: 409 QNPAATLQLCIGRCCLIYQLIHSPYFPLQLIQFLSYSDHKFVGIEVKSDLHKLQQDHRIG 230
           +NP ATLQLC+GR CLI+QL+H+P  P  L  FL    + FVG+ +  DL KL  DH +G
Sbjct: 74  ENPVATLQLCVGRSCLIFQLLHAPAIPASLNAFLRNPGYTFVGVGIDDDLEKLVGDHGLG 133

Query: 229 YNAKTVDLRRLAVDAYKMKDLKHAGLKSLARMVLGKEMVKPKWVTRSAWDDRRLTADQVH 50
             +  VDLR LA       +L++AGLK L   VLGKE+ KP+ VT S WD+  L+ DQV 
Sbjct: 134 V-SNAVDLRGLAAHELNKMELRNAGLKRLGLEVLGKEVQKPRRVTLSRWDNFYLSTDQVQ 192

Query: 49  YACIDAYVS 23
           YAC+DA++S
Sbjct: 193 YACVDAFLS 201


Top