BLASTX nr result

ID: Scutellaria24_contig00021345 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00021345
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28838.3| unnamed protein product [Vitis vinifera]               89   5e-16
ref|XP_002270622.1| PREDICTED: condensin complex subunit 2-like ...    89   5e-16
ref|XP_002529335.1| Condensin complex subunit, putative [Ricinus...    76   2e-12
ref|XP_004151942.1| PREDICTED: LOW QUALITY PROTEIN: condensin co...    71   8e-11
ref|NP_180818.2| condensin complex subunit 2 [Arabidopsis thalia...    66   3e-09

>emb|CBI28838.3| unnamed protein product [Vitis vinifera]
          Length = 669

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 49/114 (42%), Positives = 67/114 (58%), Gaps = 4/114 (3%)
 Frame = -1

Query: 330 KSEICPSLRDLVDQFGTDDQRRSESYSSGLVNE----SHDVDADVDGDTLGDSGTWDFDH 163
           K EI P+LR++VD+F  ++QR  +++SS   +E    S   +A+ D D   +  TW FDH
Sbjct: 288 KDEISPTLRNIVDRFDENNQRPLDTFSSAHKSEEQVNSVYNEAESDVDAFENCNTWTFDH 347

Query: 162 DDQASVVDEGIHDQDTIFPCHQEVPDLADEQLNLHDPDEDDRFEEVDSYLFSSL 1
           DD+ SVVDE  +  D +FP H E          + +PD DDRFE VD YLF SL
Sbjct: 348 DDRTSVVDEDSYGADPVFPVHHE----ESGPFTVVEPDMDDRFERVDDYLFLSL 397


>ref|XP_002270622.1| PREDICTED: condensin complex subunit 2-like [Vitis vinifera]
          Length = 674

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 49/114 (42%), Positives = 67/114 (58%), Gaps = 4/114 (3%)
 Frame = -1

Query: 330 KSEICPSLRDLVDQFGTDDQRRSESYSSGLVNE----SHDVDADVDGDTLGDSGTWDFDH 163
           K EI P+LR++VD+F  ++QR  +++SS   +E    S   +A+ D D   +  TW FDH
Sbjct: 288 KDEISPTLRNIVDRFDENNQRPLDTFSSAHKSEEQVNSVYNEAESDVDAFENCNTWTFDH 347

Query: 162 DDQASVVDEGIHDQDTIFPCHQEVPDLADEQLNLHDPDEDDRFEEVDSYLFSSL 1
           DD+ SVVDE  +  D +FP H E          + +PD DDRFE VD YLF SL
Sbjct: 348 DDRTSVVDEDSYGADPVFPVHHE----ESGPFTVVEPDMDDRFERVDDYLFLSL 397


>ref|XP_002529335.1| Condensin complex subunit, putative [Ricinus communis]
           gi|223531206|gb|EEF33052.1| Condensin complex subunit,
           putative [Ricinus communis]
          Length = 584

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 45/117 (38%), Positives = 72/117 (61%), Gaps = 8/117 (6%)
 Frame = -1

Query: 327 SEICPSLRDLVDQFGTDDQRRSESY-----SSGLVN--ESHDVDADVDGDTLGDSGTWDF 169
           +EI P+L+ +V+QF  D++R  +++     SS +++  ES++ + D DG+      TW  
Sbjct: 267 AEISPTLKIIVNQFDEDNKRPLDTFPSLQKSSQVLDKDESYNEEVDFDGNAFESGETWTC 326

Query: 168 DHDDQASVVDEGIHDQDTIFP-CHQEVPDLADEQLNLHDPDEDDRFEEVDSYLFSSL 1
           +HD+Q SVVD+  +  DT FP  H+E     +E  + + PD DDRF++VDSYL  SL
Sbjct: 327 EHDEQTSVVDDEPNGADTSFPSIHEE-----NELFSFNGPDMDDRFDKVDSYLSFSL 378


>ref|XP_004151942.1| PREDICTED: LOW QUALITY PROTEIN: condensin complex subunit 2-like
           [Cucumis sativus] gi|449490353|ref|XP_004158580.1|
           PREDICTED: LOW QUALITY PROTEIN: condensin complex
           subunit 2-like [Cucumis sativus]
          Length = 667

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 44/115 (38%), Positives = 61/115 (53%), Gaps = 5/115 (4%)
 Frame = -1

Query: 330 KSEICPSLRDLVDQFGTDDQRRSESYSSG-----LVNESHDVDADVDGDTLGDSGTWDFD 166
           K EI P+LR++V+ F  D+ R S+  SSG      V+  +DVD    GD   + GT ++D
Sbjct: 287 KDEISPTLRNIVNLFDEDNIRPSDYCSSGPKAAEQVHMDYDVDDRFHGDDFENFGTENYD 346

Query: 165 HDDQASVVDEGIHDQDTIFPCHQEVPDLADEQLNLHDPDEDDRFEEVDSYLFSSL 1
           +DDQ S+VD+G    D  F  + E           HDPD ++R   VD YL S L
Sbjct: 347 NDDQTSMVDDGPGGGDADFSTYNE----ESVSTTYHDPDVEERLGNVDEYLISCL 397


>ref|NP_180818.2| condensin complex subunit 2 [Arabidopsis thaliana]
           gi|75217252|sp|Q564K3.1|CND2_ARATH RecName:
           Full=Condensin complex subunit 2; AltName:
           Full=Chromosome-associated protein H; Short=AtCAP-H;
           AltName: Full=Non-SMC condensin I complex subunit H;
           AltName: Full=Protein EMBRYO DEFECTIVE 2795
           gi|62533251|dbj|BAD95575.1| chromosome associate protein
           subunit H [Arabidopsis thaliana]
           gi|330253609|gb|AEC08703.1| condensin complex subunit 2
           [Arabidopsis thaliana]
          Length = 671

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 45/119 (37%), Positives = 65/119 (54%), Gaps = 9/119 (7%)
 Frame = -1

Query: 330 KSEICPSLRDLVDQFGTDDQRRSESYSSG-LVNESHDVDADVDGDTLGDSGTWD-----F 169
           K EI PSLR +++QF  ++QR S+++S G    ES D+    D     D   ++     F
Sbjct: 284 KDEIVPSLRAIINQFDEENQRPSDTFSCGQQTTESFDISHGNDASYADDDEGYENFGTSF 343

Query: 168 DHDDQASVVDE--GIHDQDTIFP-CHQEVPDLADEQLNLHDPDEDDRFEEVDSYLFSSL 1
           D++ Q+  VDE  G ++ + I+   H+EV     E  +L D D DDR E VD YLF SL
Sbjct: 344 DYEGQSGDVDENFGPNEAEPIYSNFHEEV-----EPASLQDMDSDDRLENVDDYLFLSL 397


Top