BLASTX nr result

ID: Scutellaria24_contig00021327 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00021327
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADW77290.1| CLE36 protein [Glycine max]                             57   2e-06
ref|XP_002298051.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06
ref|XP_002301618.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>gb|ADW77290.1| CLE36 protein [Glycine max]
          Length = 87

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 34/78 (43%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
 Frame = +3

Query: 96  LLIMLIFLSITQLSKC----RDFPRKSTIHEGSSSRFQSEFSWYHPVQSPMKSRNEEDES 263
           LLI++I L I QLS C    R   ++    E SSS  QS  SW+   ++      EE   
Sbjct: 10  LLILIITLMIGQLSSCCKAGRWMSKEIKQKENSSSSQQSSISWHFYTKTQQVPSTEEVHP 69

Query: 264 IFRVSNRKTPGGPNPLHN 317
           I+ VS R  PGGPNPLHN
Sbjct: 70  IYGVSLRDVPGGPNPLHN 87


>ref|XP_002298051.1| predicted protein [Populus trichocarpa] gi|222845309|gb|EEE82856.1|
           predicted protein [Populus trichocarpa]
          Length = 86

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
 Frame = +3

Query: 66  MRIHSSKPHLLLIMLIFLSITQLSKCR--DFPRKSTIHEGSSSRFQSEFSWYHPVQSPMK 239
           MRI + +   L +M+I L+I+QLS CR      +   ++   +   ++FSW+   ++P  
Sbjct: 1   MRIPNPRRSFLFLMII-LAISQLSSCRYLHINIRDQTNQTVETDVSTQFSWHFTAKAPEG 59

Query: 240 SRNEE-DESIFRVSNRKTPGGPNPLHN 317
           S  +E D+ ++  S R  PGGPNPLHN
Sbjct: 60  SNKDEIDDPVYGASYRTVPGGPNPLHN 86


>ref|XP_002301618.1| predicted protein [Populus trichocarpa]
           gi|224103377|ref|XP_002334059.1| predicted protein
           [Populus trichocarpa] gi|222839755|gb|EEE78078.1|
           predicted protein [Populus trichocarpa]
           gi|222843344|gb|EEE80891.1| predicted protein [Populus
           trichocarpa]
          Length = 87

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
 Frame = +3

Query: 102 IMLIFLSITQLSKCRDFPRKSTIHEGSS--SRFQSEFSWYHPVQSPMKSRNEEDESIFRV 275
           +++I L + QLS C     +++   G +  +   S FSW        +S  +E ++I+RV
Sbjct: 14  VLMIMLVVNQLSSCHFIHSRTSEEPGKTVETDLSSHFSWKFKEMVRERSSKDESDTIYRV 73

Query: 276 SNRKTPGGPNPLHN 317
           S RK P GPNPLHN
Sbjct: 74  SRRKIPAGPNPLHN 87


Top