BLASTX nr result

ID: Scutellaria24_contig00021298 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00021298
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141609.1| PREDICTED: pentatricopeptide repeat-containi...    96   4e-18
ref|XP_002264078.2| PREDICTED: pentatricopeptide repeat-containi...    85   7e-15
ref|XP_002338705.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_002529628.1| pentatricopeptide repeat-containing protein,...    76   3e-12
ref|XP_003549152.1| PREDICTED: pentatricopeptide repeat-containi...    75   4e-12

>ref|XP_004141609.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g33350-like [Cucumis sativus]
           gi|449510706|ref|XP_004163739.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g33350-like [Cucumis sativus]
          Length = 563

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 45/97 (46%), Positives = 64/97 (65%)
 Frame = +1

Query: 1   DKFSSPNXXXXXXXXXXXXSVPDHESAVLLYRDMVRENRSKPNHFMFPLILKSWPEVVRS 180
           D  +SPN            S PD ++A LLYR+MVR    +PN+F++P +L+S P+V+ S
Sbjct: 100 DNLTSPNVFLYTAMITAYASYPDPKAAFLLYRNMVRRGAIRPNNFIYPHVLRSCPDVLGS 159

Query: 181 YGVEFVQAQIVKSGYGGYPVVQTAILDAYSRYGVGIG 291
              + V  Q++KSG+GGYPVVQTAI+D+YSR+   IG
Sbjct: 160 NATKMVHTQVLKSGFGGYPVVQTAIVDSYSRFSSDIG 196


>ref|XP_002264078.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g33350-like [Vitis vinifera]
          Length = 573

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 43/92 (46%), Positives = 55/92 (59%)
 Frame = +1

Query: 1   DKFSSPNXXXXXXXXXXXXSVPDHESAVLLYRDMVRENRSKPNHFMFPLILKSWPEVVRS 180
           D   SPN            S  DH SA+LLYR+MVR  R  PNHF++P +LKS  +VV  
Sbjct: 112 DHVESPNVYLYTAMITAYASHSDHTSALLLYRNMVRRRRPWPNHFIYPHVLKSCTQVVGP 171

Query: 181 YGVEFVQAQIVKSGYGGYPVVQTAILDAYSRY 276
                V  Q+++SG+  YPVVQTA+LDAY R+
Sbjct: 172 GSARMVHCQVLRSGFEQYPVVQTALLDAYLRF 203


>ref|XP_002338705.1| predicted protein [Populus trichocarpa] gi|222873268|gb|EEF10399.1|
           predicted protein [Populus trichocarpa]
          Length = 263

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 40/78 (51%), Positives = 54/78 (69%)
 Frame = +1

Query: 58  SVPDHESAVLLYRDMVRENRSKPNHFMFPLILKSWPEVVRSYGVEFVQAQIVKSGYGGYP 237
           S+ DH+S+  L+R M+R    KPNHF+FP +LK + +V +     FV AQI K G+G YP
Sbjct: 7   SIQDHQSSFDLFRFMLRRGHPKPNHFLFPHVLK-YCQVTK-----FVHAQIEKLGFGQYP 60

Query: 238 VVQTAILDAYSRYGVGIG 291
           VVQTA++D+YSR G  IG
Sbjct: 61  VVQTALIDSYSRSGYDIG 78


>ref|XP_002529628.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530913|gb|EEF32773.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 400

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 44/94 (46%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
 Frame = +1

Query: 13  SPNXXXXXXXXXXXXSVPDHE-SAVLLYRDMVRENRSKPNHFMFPLILKSWPEVVRSYGV 189
           SPN            S PDH  SA  LYRDMVR    KPNHF+FP +LKS          
Sbjct: 70  SPNIYLFTALVTAYASNPDHHLSAFELYRDMVRRAHPKPNHFIFPHVLKS------CQNT 123

Query: 190 EFVQAQIVKSGYGGYPVVQTAILDAYSRYGVGIG 291
           + V +QI K G+  YPVVQTA++D+YSR+   IG
Sbjct: 124 KVVHSQIAKLGFSQYPVVQTALVDSYSRFMSDIG 157


>ref|XP_003549152.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g33350-like [Glycine max]
          Length = 522

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 38/74 (51%), Positives = 51/74 (68%)
 Frame = +1

Query: 70  HESAVLLYRDMVRENRSKPNHFMFPLILKSWPEVVRSYGVEFVQAQIVKSGYGGYPVVQT 249
           H SA+ L+R M+R    +PNHF+FP  LK+ PE   S   E + AQIVKSG+  YPVVQT
Sbjct: 87  HPSALSLFRHMLRSQPPRPNHFIFPHALKTCPE---SCAAESLHAQIVKSGFHEYPVVQT 143

Query: 250 AILDAYSRYGVGIG 291
           A++D+YS+   G+G
Sbjct: 144 ALVDSYSKVSGGLG 157


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