BLASTX nr result

ID: Scutellaria24_contig00021258 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00021258
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522527.1| ATP-dependent RNA helicase, putative [Ricinu...    79   4e-13
ref|XP_002320997.1| predicted protein [Populus trichocarpa] gi|2...    75   4e-12
ref|XP_004148780.1| PREDICTED: probable ATP-dependent RNA helica...    75   6e-12
gb|ADN23834.1| RSH1 [Ipomoea nil]                                      75   6e-12
ref|XP_002276679.2| PREDICTED: probable ATP-dependent RNA helica...    74   9e-12

>ref|XP_002522527.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223538218|gb|EEF39827.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 696

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 38/54 (70%), Positives = 45/54 (83%)
 Frame = +2

Query: 71  RLGQDAEE*GPSKEPAILSVKGRGFNVDIFYVEEPVSDYILAAVSTVLSIHDED 232
           R G +A+E GP KEPAILSV+GRGFNV I YVEE V+DY+ A VSTVLSIHD++
Sbjct: 220 RRGLEADELGPRKEPAILSVEGRGFNVQILYVEEAVADYVRATVSTVLSIHDQE 273


>ref|XP_002320997.1| predicted protein [Populus trichocarpa] gi|222861770|gb|EEE99312.1|
           predicted protein [Populus trichocarpa]
          Length = 892

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 36/43 (83%), Positives = 38/43 (88%)
 Frame = +2

Query: 227 EDLKPSISYLSPKALELVRKALNLIF*AHDGQKRRSGEPFIIH 355
           EDLKP++SYLSPK LELV KAL L F AHDGQKRRSGEPFIIH
Sbjct: 134 EDLKPTVSYLSPKELELVHKALKLAFEAHDGQKRRSGEPFIIH 176


>ref|XP_004148780.1| PREDICTED: probable ATP-dependent RNA helicase DHX35-like [Cucumis
           sativus] gi|449515633|ref|XP_004164853.1| PREDICTED:
           probable ATP-dependent RNA helicase DHX35-like [Cucumis
           sativus]
          Length = 696

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 36/54 (66%), Positives = 44/54 (81%)
 Frame = +2

Query: 71  RLGQDAEE*GPSKEPAILSVKGRGFNVDIFYVEEPVSDYILAAVSTVLSIHDED 232
           R G + E   P  EPAILSV+GRGFNV IFY+EEPVSDY+ +AVSTVLSIH+++
Sbjct: 220 RRGLEGETLEPKVEPAILSVEGRGFNVQIFYLEEPVSDYVQSAVSTVLSIHEQE 273


>gb|ADN23834.1| RSH1 [Ipomoea nil]
          Length = 885

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 36/43 (83%), Positives = 39/43 (90%)
 Frame = +2

Query: 227 EDLKPSISYLSPKALELVRKALNLIF*AHDGQKRRSGEPFIIH 355
           EDL+P+ISYLSPK LELV+ ALNL F AHDGQKRRSGEPFIIH
Sbjct: 132 EDLQPTISYLSPKELELVQNALNLAFEAHDGQKRRSGEPFIIH 174


>ref|XP_002276679.2| PREDICTED: probable ATP-dependent RNA helicase DHX35 [Vitis
           vinifera]
          Length = 695

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 35/54 (64%), Positives = 44/54 (81%)
 Frame = +2

Query: 71  RLGQDAEE*GPSKEPAILSVKGRGFNVDIFYVEEPVSDYILAAVSTVLSIHDED 232
           R G + EE GP  +PAILSV+GRGFNV I ++EEPV DY+ AAVSTVLSIH+++
Sbjct: 219 RRGLEGEESGPRTDPAILSVEGRGFNVQIHHIEEPVPDYLQAAVSTVLSIHEQE 272


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