BLASTX nr result

ID: Scutellaria24_contig00021117 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00021117
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264570.1| PREDICTED: large subunit GTPase 1 homolog [V...    64   2e-08
ref|XP_002889691.1| GTP-binding family protein [Arabidopsis lyra...    59   5e-07
ref|NP_172317.1| P-loop containing nucleoside triphosphate hydro...    57   1e-06

>ref|XP_002264570.1| PREDICTED: large subunit GTPase 1 homolog [Vitis vinifera]
          Length = 597

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 34/70 (48%), Positives = 42/70 (60%)
 Frame = -3

Query: 258 HALNDLNSFDIDNGLASARTSVKKTSNXXXXXXXXXXXXXXRTWRVKGGSESDGMPVVKV 79
           H LNDL++FD+ NGLAS +  V+KT                R+WRVK   E DGMPV +V
Sbjct: 526 HVLNDLDAFDMANGLASKKAPVQKTPKAPHKQHKKPQRKKDRSWRVK-NDEDDGMPVARV 584

Query: 78  FQKPVSRGSL 49
           FQKPV+ G L
Sbjct: 585 FQKPVNTGPL 594


>ref|XP_002889691.1| GTP-binding family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297335533|gb|EFH65950.1| GTP-binding family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 583

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/69 (43%), Positives = 39/69 (56%)
 Frame = -3

Query: 252 LNDLNSFDIDNGLASARTSVKKTSNXXXXXXXXXXXXXXRTWRVKGGSESDGMPVVKVFQ 73
           L+DL+SFD+ NGL S++    K                 RTWRV+   + DGMP+VKVFQ
Sbjct: 513 LDDLSSFDLANGLKSSKKVTAKKQTASHKQHKKPQRKKDRTWRVQNTEDGDGMPMVKVFQ 572

Query: 72  KPVSRGSLT 46
           KP + G LT
Sbjct: 573 KPANTGPLT 581


>ref|NP_172317.1| P-loop containing nucleoside triphosphate hydrolase-like protein
           [Arabidopsis thaliana]
           gi|6664306|gb|AAF22888.1|AC006932_5 T27G7.9 [Arabidopsis
           thaliana] gi|66792666|gb|AAY56435.1| At1g08410
           [Arabidopsis thaliana] gi|133778880|gb|ABO38780.1|
           At1g08410 [Arabidopsis thaliana]
           gi|332190165|gb|AEE28286.1| P-loop containing nucleoside
           triphosphate hydrolase-like protein [Arabidopsis
           thaliana]
          Length = 589

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 30/69 (43%), Positives = 38/69 (55%)
 Frame = -3

Query: 252 LNDLNSFDIDNGLASARTSVKKTSNXXXXXXXXXXXXXXRTWRVKGGSESDGMPVVKVFQ 73
           L+DL+SFD+ NGL S++    K                 RTWRV+   + DGMP VKVFQ
Sbjct: 519 LDDLSSFDLANGLKSSKKVTAKKQTASHKQHKKPQRKKDRTWRVQNTEDGDGMPSVKVFQ 578

Query: 72  KPVSRGSLT 46
           KP + G LT
Sbjct: 579 KPANTGPLT 587


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