BLASTX nr result

ID: Scutellaria24_contig00021106 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00021106
         (602 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306959.1| predicted protein [Populus trichocarpa] gi|2...   131   8e-29
ref|XP_002305536.1| predicted protein [Populus trichocarpa] gi|2...   131   8e-29
ref|XP_003555206.1| PREDICTED: hippocampus abundant transcript 1...   130   2e-28
ref|XP_003535759.1| PREDICTED: hippocampus abundant transcript 1...   130   2e-28
ref|XP_002521243.1| tetracycline transporter, putative [Ricinus ...   129   5e-28

>ref|XP_002306959.1| predicted protein [Populus trichocarpa] gi|222856408|gb|EEE93955.1|
           predicted protein [Populus trichocarpa]
          Length = 447

 Score =  131 bits (330), Expect = 8e-29
 Identities = 67/127 (52%), Positives = 87/127 (68%), Gaps = 3/127 (2%)
 Frame = +2

Query: 14  LIFVLMQMFLDSIAWATWVPYASASTGVFLFLTSPNLRSIISKQVGPNEQGLAQGSILSI 193
           L F  + +FL SIAW  WVPY +A   V +  + P +RSI+SKQVG  EQG AQG I  I
Sbjct: 319 LFFTCVHVFLYSIAWTFWVPYVAAMFSVLIVFSQPCMRSIVSKQVGSCEQGKAQGCISGI 378

Query: 194 TAFANVISPLIYSPLSALVLAEDAPFHFQGFSILCVGLAWLVGFFLSILI---PILSRNK 364
           ++FANVISPL++SPL+AL L+E APFHF GFSI+CVG A ++ F  S++I   P ++  K
Sbjct: 379 SSFANVISPLLFSPLTALFLSERAPFHFPGFSIMCVGFASMIAFIQSLMIRIAPPIANEK 438

Query: 365 SRNDNIV 385
             N N V
Sbjct: 439 VCNSNYV 445


>ref|XP_002305536.1| predicted protein [Populus trichocarpa] gi|222848500|gb|EEE86047.1|
           predicted protein [Populus trichocarpa]
          Length = 402

 Score =  131 bits (330), Expect = 8e-29
 Identities = 66/115 (57%), Positives = 81/115 (70%), Gaps = 4/115 (3%)
 Frame = +2

Query: 41  LDSIAWATWVPYASASTGVFLFLTSPNLRSIISKQVGPNEQGLAQGSILSITAFANVISP 220
           L S+AW+ WVPYA+    VF+    P LRSI SKQVGP EQG AQG I  I +FAN+ISP
Sbjct: 287 LYSVAWSNWVPYATTIFAVFIVCVPPCLRSIASKQVGPTEQGKAQGCISGIISFANIISP 346

Query: 221 LIYSPLSALVLAEDAPFHFQGFSILCVGLAWLVGFFLSILI----PILSRNKSRN 373
           LI+SPL+AL L+EDAPFHF GFSILC+G   ++ FF S+L+    P+ S   S N
Sbjct: 347 LIFSPLTALFLSEDAPFHFPGFSILCIGFVTMIAFFQSVLMRGPPPVSSHKISCN 401


>ref|XP_003555206.1| PREDICTED: hippocampus abundant transcript 1 protein-like [Glycine
           max]
          Length = 443

 Score =  130 bits (326), Expect = 2e-28
 Identities = 60/110 (54%), Positives = 83/110 (75%)
 Frame = +2

Query: 14  LIFVLMQMFLDSIAWATWVPYASASTGVFLFLTSPNLRSIISKQVGPNEQGLAQGSILSI 193
           L+   + +F+ SIAW  WVPYA A   VF     P+L SI SKQVGP EQG+ QG + +I
Sbjct: 313 LLISCINVFVYSIAWTAWVPYALAGCSVFAVFVRPSLCSIASKQVGPTEQGMVQGCLSAI 372

Query: 194 TAFANVISPLIYSPLSALVLAEDAPFHFQGFSILCVGLAWLVGFFLSILI 343
           ++FAN+I+PLI+SPL+AL L+E+APF+F GFS++C+GLA +V FF S++I
Sbjct: 373 SSFANIIAPLIFSPLTALFLSEEAPFYFPGFSLMCLGLALMVAFFQSLII 422


>ref|XP_003535759.1| PREDICTED: hippocampus abundant transcript 1 protein-like [Glycine
           max]
          Length = 443

 Score =  130 bits (326), Expect = 2e-28
 Identities = 60/110 (54%), Positives = 83/110 (75%)
 Frame = +2

Query: 14  LIFVLMQMFLDSIAWATWVPYASASTGVFLFLTSPNLRSIISKQVGPNEQGLAQGSILSI 193
           L+   + +F+ SIAW  WVPYA A   VF     P+L SI SKQVGP EQG+ QG + +I
Sbjct: 313 LLISCINVFVYSIAWTAWVPYALAGCSVFAVFVRPSLCSIASKQVGPTEQGMVQGCLSAI 372

Query: 194 TAFANVISPLIYSPLSALVLAEDAPFHFQGFSILCVGLAWLVGFFLSILI 343
           ++FAN+I+PLI+SPL+AL L+E+APF+F GFS++C+GLA +V FF S++I
Sbjct: 373 SSFANIIAPLIFSPLTALFLSEEAPFYFPGFSLMCLGLALMVAFFQSLMI 422


>ref|XP_002521243.1| tetracycline transporter, putative [Ricinus communis]
           gi|223539511|gb|EEF41099.1| tetracycline transporter,
           putative [Ricinus communis]
          Length = 410

 Score =  129 bits (323), Expect = 5e-28
 Identities = 62/112 (55%), Positives = 84/112 (75%)
 Frame = +2

Query: 14  LIFVLMQMFLDSIAWATWVPYASASTGVFLFLTSPNLRSIISKQVGPNEQGLAQGSILSI 193
           L    + M L SI+W+ WVPYA+ +  VF+   +P+LRSI+SKQVGP+EQG AQG I SI
Sbjct: 239 LFMGFVTMLLYSISWSFWVPYATTALTVFVVFVTPSLRSIVSKQVGPDEQGKAQGCISSI 298

Query: 194 TAFANVISPLIYSPLSALVLAEDAPFHFQGFSILCVGLAWLVGFFLSILIPI 349
           ++FAN+ISPLI+SPL+AL L+E+APFHF GFS+LC+G A +  + +   I I
Sbjct: 299 SSFANIISPLIFSPLTALFLSEEAPFHFPGFSMLCIGFALVKVYLVFTCISI 350


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