BLASTX nr result

ID: Scutellaria24_contig00021045 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00021045
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT67045.1| DNA mismatch repair protein [Petunia x hybrida]        135   3e-30
ref|XP_002311781.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28
emb|CBI36942.3| unnamed protein product [Vitis vinifera]              129   3e-28
ref|XP_002275930.1| PREDICTED: DNA mismatch repair protein Msh6-...   129   3e-28
emb|CAN78918.1| hypothetical protein VITISV_032225 [Vitis vinifera]   129   3e-28

>gb|AAT67045.1| DNA mismatch repair protein [Petunia x hybrida]
          Length = 1303

 Score =  135 bits (340), Expect = 3e-30
 Identities = 64/85 (75%), Positives = 74/85 (87%)
 Frame = -1

Query: 320 QTETPEQLELRRREKGSKDKVVRREICAVVTKGTLTEGEMLSTNPDPSYMIAVTESCQVS 141
           QTETPEQLE+RRREKGSKDKVVRRE+CAVVTKGTLTEGEML+ NPD SY++AVTES Q +
Sbjct: 421 QTETPEQLEIRRREKGSKDKVVRREVCAVVTKGTLTEGEMLAANPDASYLMAVTESFQTA 480

Query: 140 TNEEGVHVFGICAVDAATSKIILGQ 66
             ++G H +G+C VD  TSKIILGQ
Sbjct: 481 AYQQGKHTYGVCMVDITTSKIILGQ 505


>ref|XP_002311781.1| predicted protein [Populus trichocarpa] gi|222851601|gb|EEE89148.1|
           predicted protein [Populus trichocarpa]
          Length = 931

 Score =  130 bits (327), Expect = 1e-28
 Identities = 63/87 (72%), Positives = 74/87 (85%)
 Frame = -1

Query: 320 QTETPEQLELRRREKGSKDKVVRREICAVVTKGTLTEGEMLSTNPDPSYMIAVTESCQVS 141
           QTETPEQLELRR+EKGSKDKVV+REICAV+TKGTLTEGE+LS NPD SY++A+TES Q  
Sbjct: 208 QTETPEQLELRRKEKGSKDKVVKREICAVITKGTLTEGELLSANPDASYLMALTESRQSL 267

Query: 140 TNEEGVHVFGICAVDAATSKIILGQVG 60
            N+    +FG+CAVD  TS+IILGQ G
Sbjct: 268 ANQGLERIFGVCAVDVTTSRIILGQFG 294


>emb|CBI36942.3| unnamed protein product [Vitis vinifera]
          Length = 1237

 Score =  129 bits (324), Expect = 3e-28
 Identities = 65/85 (76%), Positives = 71/85 (83%)
 Frame = -1

Query: 320 QTETPEQLELRRREKGSKDKVVRREICAVVTKGTLTEGEMLSTNPDPSYMIAVTESCQVS 141
           QTETPEQLELRR+EKGSKDKVV+REICAVVTKGTLTEGEMLS NPD SY++AVTESCQ  
Sbjct: 383 QTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEMLSANPDASYLMAVTESCQFE 442

Query: 140 TNEEGVHVFGICAVDAATSKIILGQ 66
                   FG+C VD ATS+IILGQ
Sbjct: 443 ERS-----FGVCVVDVATSRIILGQ 462


>ref|XP_002275930.1| PREDICTED: DNA mismatch repair protein Msh6-1-like [Vitis vinifera]
          Length = 1297

 Score =  129 bits (324), Expect = 3e-28
 Identities = 65/85 (76%), Positives = 71/85 (83%)
 Frame = -1

Query: 320 QTETPEQLELRRREKGSKDKVVRREICAVVTKGTLTEGEMLSTNPDPSYMIAVTESCQVS 141
           QTETPEQLELRR+EKGSKDKVV+REICAVVTKGTLTEGEMLS NPD SY++AVTESCQ  
Sbjct: 413 QTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEMLSANPDASYLMAVTESCQFE 472

Query: 140 TNEEGVHVFGICAVDAATSKIILGQ 66
                   FG+C VD ATS+IILGQ
Sbjct: 473 ERS-----FGVCVVDVATSRIILGQ 492


>emb|CAN78918.1| hypothetical protein VITISV_032225 [Vitis vinifera]
          Length = 1349

 Score =  129 bits (324), Expect = 3e-28
 Identities = 65/85 (76%), Positives = 71/85 (83%)
 Frame = -1

Query: 320 QTETPEQLELRRREKGSKDKVVRREICAVVTKGTLTEGEMLSTNPDPSYMIAVTESCQVS 141
           QTETPEQLELRR+EKGSKDKVV+REICAVVTKGTLTEGEMLS NPD SY++AVTESCQ  
Sbjct: 421 QTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEMLSANPDASYLMAVTESCQFE 480

Query: 140 TNEEGVHVFGICAVDAATSKIILGQ 66
                   FG+C VD ATS+IILGQ
Sbjct: 481 ERS-----FGVCVVDVATSRIILGQ 500


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