BLASTX nr result

ID: Scutellaria24_contig00021028 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00021028
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_200092.2| DNA primase [Arabidopsis thaliana] gi|332008878...    67   2e-09
ref|NP_001154775.1| DNA primase [Arabidopsis thaliana] gi|332008...    67   2e-09
ref|NP_001032064.1| DNA primase [Arabidopsis thaliana] gi|523545...    67   2e-09
gb|AAU44590.1| hypothetical protein AT5G52800 [Arabidopsis thali...    67   2e-09
ref|XP_002864194.1| hypothetical protein ARALYDRAFT_495344 [Arab...    67   2e-09

>ref|NP_200092.2| DNA primase [Arabidopsis thaliana] gi|332008878|gb|AED96261.1| DNA
           primase [Arabidopsis thaliana]
          Length = 506

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 40/102 (39%), Positives = 51/102 (50%), Gaps = 26/102 (25%)
 Frame = +1

Query: 133 TSTMDDVDRLFQCFKCGISPL*SAVXXXXXXXXXXXXXXHSP----KLQASKISE----- 285
           +++MDDVDRLFQCFKCGISP  SA+               SP    KLQ S +S      
Sbjct: 7   SNSMDDVDRLFQCFKCGISPPASAMREKKRSKKMLNSEYDSPVTCKKLQLSSLSRLSGKR 66

Query: 286 -----------------NKSVNLKTGKQFSPVIFYGSPHGVP 360
                            ++ V    G+QFSP++FYGSP+GVP
Sbjct: 67  GERNQIDGSVSVDSVSGSRDVKKSVGRQFSPIVFYGSPNGVP 108


>ref|NP_001154775.1| DNA primase [Arabidopsis thaliana] gi|332008880|gb|AED96263.1| DNA
           primase [Arabidopsis thaliana]
          Length = 614

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 40/102 (39%), Positives = 51/102 (50%), Gaps = 26/102 (25%)
 Frame = +1

Query: 133 TSTMDDVDRLFQCFKCGISPL*SAVXXXXXXXXXXXXXXHSP----KLQASKISE----- 285
           +++MDDVDRLFQCFKCGISP  SA+               SP    KLQ S +S      
Sbjct: 7   SNSMDDVDRLFQCFKCGISPPASAMREKKRSKKMLNSEYDSPVTCKKLQLSSLSRLSGKR 66

Query: 286 -----------------NKSVNLKTGKQFSPVIFYGSPHGVP 360
                            ++ V    G+QFSP++FYGSP+GVP
Sbjct: 67  GERNQIDGSVSVDSVSGSRDVKKSVGRQFSPIVFYGSPNGVP 108


>ref|NP_001032064.1| DNA primase [Arabidopsis thaliana] gi|52354541|gb|AAU44591.1|
           hypothetical protein AT5G52800 [Arabidopsis thaliana]
           gi|332008879|gb|AED96262.1| DNA primase [Arabidopsis
           thaliana]
          Length = 450

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 40/102 (39%), Positives = 51/102 (50%), Gaps = 26/102 (25%)
 Frame = +1

Query: 133 TSTMDDVDRLFQCFKCGISPL*SAVXXXXXXXXXXXXXXHSP----KLQASKISE----- 285
           +++MDDVDRLFQCFKCGISP  SA+               SP    KLQ S +S      
Sbjct: 7   SNSMDDVDRLFQCFKCGISPPASAMREKKRSKKMLNSEYDSPVTCKKLQLSSLSRLSGKR 66

Query: 286 -----------------NKSVNLKTGKQFSPVIFYGSPHGVP 360
                            ++ V    G+QFSP++FYGSP+GVP
Sbjct: 67  GERNQIDGSVSVDSVSGSRDVKKSVGRQFSPIVFYGSPNGVP 108


>gb|AAU44590.1| hypothetical protein AT5G52800 [Arabidopsis thaliana]
          Length = 506

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 40/102 (39%), Positives = 51/102 (50%), Gaps = 26/102 (25%)
 Frame = +1

Query: 133 TSTMDDVDRLFQCFKCGISPL*SAVXXXXXXXXXXXXXXHSP----KLQASKISE----- 285
           +++MDDVDRLFQCFKCGISP  SA+               SP    KLQ S +S      
Sbjct: 7   SNSMDDVDRLFQCFKCGISPPASAMREKKRSKKMLNSEYDSPVTCKKLQLSSLSRLSGKR 66

Query: 286 -----------------NKSVNLKTGKQFSPVIFYGSPHGVP 360
                            ++ V    G+QFSP++FYGSP+GVP
Sbjct: 67  GERNQIDGSVSVDSVSGSRDVKKSVGRQFSPIVFYGSPNGVP 108


>ref|XP_002864194.1| hypothetical protein ARALYDRAFT_495344 [Arabidopsis lyrata subsp.
           lyrata] gi|297310029|gb|EFH40453.1| hypothetical protein
           ARALYDRAFT_495344 [Arabidopsis lyrata subsp. lyrata]
          Length = 494

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 40/101 (39%), Positives = 50/101 (49%), Gaps = 26/101 (25%)
 Frame = +1

Query: 136 STMDDVDRLFQCFKCGISPL*SAVXXXXXXXXXXXXXXHSP----KLQASKISE------ 285
           + MDDVDRLFQCFKCGISP  SA+               SP    KLQ S +S       
Sbjct: 8   NAMDDVDRLFQCFKCGISPPASAMREKKRSKKMVNPENDSPGTCKKLQLSSLSRLSGKKG 67

Query: 286 ----------------NKSVNLKTGKQFSPVIFYGSPHGVP 360
                           +++V    G+QFSP++FYGSP+GVP
Sbjct: 68  QRNQIDGGVSLDSVSGSRNVKKSVGRQFSPIVFYGSPNGVP 108


Top