BLASTX nr result

ID: Scutellaria24_contig00021006 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00021006
         (671 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containi...    99   6e-19
ref|XP_002322628.1| predicted protein [Populus trichocarpa] gi|2...    82   1e-13
ref|XP_003630975.1| Pentatricopeptide repeat-containing protein ...    80   3e-13
emb|CBI30094.3| unnamed protein product [Vitis vinifera]               80   3e-13
ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containi...    80   3e-13

>ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 727

 Score = 99.4 bits (246), Expect = 6e-19
 Identities = 45/81 (55%), Positives = 60/81 (74%)
 Frame = +2

Query: 2   QDKFDDSGYHILMSNMYASTKRWKDASRVRALIKEKGLRKKPGHSWIQIGHCTHVFDARD 181
           Q K DDSG+++L+SN+YAS KRW+D S+VR++IK+KGL KKPG SWIQ+GHC +VF A  
Sbjct: 632 QLKADDSGHYVLLSNLYASGKRWEDMSKVRSMIKDKGLEKKPGSSWIQVGHCIYVFHATS 691

Query: 182 TTHSKFSNIQGILDILFSDMK 244
             H  F+ I+  L+ L   MK
Sbjct: 692 AFHPAFAKIEETLNSLLLVMK 712


>ref|XP_002322628.1| predicted protein [Populus trichocarpa] gi|222867258|gb|EEF04389.1|
           predicted protein [Populus trichocarpa]
          Length = 559

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 35/77 (45%), Positives = 60/77 (77%)
 Frame = +2

Query: 14  DDSGYHILMSNMYASTKRWKDASRVRALIKEKGLRKKPGHSWIQIGHCTHVFDARDTTHS 193
           +++G ++L+SN+YAS ++W++ASRVR  +KEKGL+K+PG SWI++G+  HVF ARD +H 
Sbjct: 463 ENAGTYLLLSNIYASGRKWREASRVRLKMKEKGLKKQPGCSWIEVGNRVHVFLARDKSHY 522

Query: 194 KFSNIQGILDILFSDMK 244
           + + I  ++  + ++MK
Sbjct: 523 QSNLIYSLVHDIHAEMK 539


>ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355524997|gb|AET05451.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 701

 Score = 80.5 bits (197), Expect = 3e-13
 Identities = 36/84 (42%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
 Frame = +2

Query: 14  DDSGYHILMSNMYASTKRWKDASRVRALIKEKGLRKKPGHSWIQIGHCTHVFDARDTTHS 193
           ++ G ++LMSN+Y++ +RWKDA+R+R  +++KGL+K P  SWI++G+  H F A D +H 
Sbjct: 530 ENMGAYVLMSNIYSAAQRWKDAARLRIHMRKKGLKKTPACSWIEVGNQVHTFMAGDKSHP 589

Query: 194 KFSNIQGILDILFSDM-KEWYEVD 262
            +  I   LD+L   M KE Y +D
Sbjct: 590 YYDKINKALDVLLEQMEKEGYVID 613


>emb|CBI30094.3| unnamed protein product [Vitis vinifera]
          Length = 614

 Score = 80.5 bits (197), Expect = 3e-13
 Identities = 36/78 (46%), Positives = 58/78 (74%)
 Frame = +2

Query: 14  DDSGYHILMSNMYASTKRWKDASRVRALIKEKGLRKKPGHSWIQIGHCTHVFDARDTTHS 193
           +++G ++L+SN+YAST +W++A+RVR  +K+KGL+K+PG SWI++G+  HVF   D +HS
Sbjct: 519 ENAGTYLLLSNIYASTGKWREAARVRLKMKDKGLKKQPGCSWIEVGNRVHVFVVGDKSHS 578

Query: 194 KFSNIQGILDILFSDMKE 247
           +   I  +L  L S MK+
Sbjct: 579 QSKLIYSLLRDLHSKMKK 596


>ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Vitis vinifera]
          Length = 635

 Score = 80.5 bits (197), Expect = 3e-13
 Identities = 36/78 (46%), Positives = 58/78 (74%)
 Frame = +2

Query: 14  DDSGYHILMSNMYASTKRWKDASRVRALIKEKGLRKKPGHSWIQIGHCTHVFDARDTTHS 193
           +++G ++L+SN+YAST +W++A+RVR  +K+KGL+K+PG SWI++G+  HVF   D +HS
Sbjct: 540 ENAGTYLLLSNIYASTGKWREAARVRLKMKDKGLKKQPGCSWIEVGNRVHVFVVGDKSHS 599

Query: 194 KFSNIQGILDILFSDMKE 247
           +   I  +L  L S MK+
Sbjct: 600 QSKLIYSLLRDLHSKMKK 617


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