BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00020949
         (1024 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271313.1| PREDICTED: pentatricopeptide repeat-containi...   306   4e-81
emb|CBI31981.3| unnamed protein product [Vitis vinifera]              300   5e-79
ref|NP_174012.1| pentatricopeptide repeat-containing protein [Ar...   285   1e-74
ref|XP_002890625.1| pentatricopeptide repeat-containing protein ...   282   1e-73
ref|XP_004143729.1| PREDICTED: pentatricopeptide repeat-containi...   266   5e-69

>ref|XP_002271313.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26900,
            mitochondrial-like [Vitis vinifera]
          Length = 597

 Score =  306 bits (785), Expect = 4e-81
 Identities = 156/283 (55%), Positives = 190/283 (67%)
 Frame = -1

Query: 1024 WNCLIDGYXXXXXXXXXXXXXXXXKHHTLKPNXXXXXXXXXXXXXXXXXTIGQYVHDYVE 845
            WNCLIDGY                K   +KPN                 ++G  + +YVE
Sbjct: 298  WNCLIDGYAKSDLLQESLSLLQLMKREQVKPNSSTLVGLLSACAAAGASSVGLCISNYVE 357

Query: 844  QQQLVLDAVLGTAIVDMYAKSGLFGKAIDVFDRMETKDVKSWTAMISGCGVHGEANEAAT 665
            ++Q+ LDAVLGTA+VDMY K G   KAIDVF+RME KDVKSWTAMISG GVHG+A  A  
Sbjct: 358  EEQIALDAVLGTALVDMYCKCGFLEKAIDVFERMEIKDVKSWTAMISGYGVHGQAKNAIM 417

Query: 664  LFDRMEMEGFAPNEVTFLAVLNSCSHGGLVQEGLSYFKRMVEVYRLMPKIEHYGCLIDLL 485
            +F RME+EG+ PNEVTFLAVLN+CSHGG+V EG+S+ ++MV  Y   PK+EHYGC+IDLL
Sbjct: 418  IFHRMEVEGYRPNEVTFLAVLNACSHGGMVVEGISFLEKMVREYGFSPKVEHYGCMIDLL 477

Query: 484  GRAGHLEEAYEVIKGLPVERDATAWRALLGACRVYGNVDLAEHVREELERTHENHPADLI 305
            GRAG LEEA+ +IK LP+E DAT WRALL ACRVYGNVDL E V+  L    + HP D I
Sbjct: 478  GRAGLLEEAHNLIKSLPIEGDATGWRALLAACRVYGNVDLGECVKRVLLEIFDEHPTDSI 537

Query: 304  TLASTYAVAGMLPHHEYLSYKMLKENDNESSAKKEAGCSIIEL 176
             L+STYA+AG LP  +Y   + +K    E    KEAGCS+IE+
Sbjct: 538  LLSSTYAIAGRLP--DYTRMQEIK----EEKMMKEAGCSVIEM 574



 Score = 70.9 bits (172), Expect = 5e-10
 Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 2/216 (0%)
 Frame = -1

Query: 871 GQYVHDYVEQQQLVLDAVLGTAIVDMYAKSGLFGKAIDVFDRMETKDVKSWTAMISGCGV 692
           G  +H +  +     D  + TA++DMYA +G       +F ++  KDV  W  +I G   
Sbjct: 248 GVSLHGHCIKVGFCSDLNVATALIDMYANAGFIDLGHKIFYQVPKKDVVLWNCLIDGYAK 307

Query: 691 HGEANEAATLFDRMEMEGFAPNEVTFLAVLNSCSHGGLVQEGLSYFKRMVEVYRLMPKIE 512
                E+ +L   M+ E   PN  T + +L++C+  G    GL      VE  ++     
Sbjct: 308 SDLLQESLSLLQLMKREQVKPNSSTLVGLLSACAAAGASSVGLC-ISNYVEEEQIALDAV 366

Query: 511 HYGCLIDLLGRAGHLEEAYEVIKGLPVERDATAWRALLGACRVYGNVDLAEHV--REELE 338
               L+D+  + G LE+A +V + + + +D  +W A++    V+G    A  +  R E+E
Sbjct: 367 LGTALVDMYCKCGFLEKAIDVFERMEI-KDVKSWTAMISGYGVHGQAKNAIMIFHRMEVE 425

Query: 337 RTHENHPADLITLASTYAVAGMLPHHEYLSYKMLKE 230
               N    L  L +  +  GM+        KM++E
Sbjct: 426 GYRPNEVTFLAVL-NACSHGGMVVEGISFLEKMVRE 460


>emb|CBI31981.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  300 bits (767), Expect = 5e-79
 Identities = 153/278 (55%), Positives = 185/278 (66%)
 Frame = -1

Query: 1024 WNCLIDGYXXXXXXXXXXXXXXXXKHHTLKPNXXXXXXXXXXXXXXXXXTIGQYVHDYVE 845
            WNCLIDGY                K   +KPN                 ++G  + +YVE
Sbjct: 259  WNCLIDGYAKSDLLQESLSLLQLMKREQVKPNSSTLVGLLSACAAAGASSVGLCISNYVE 318

Query: 844  QQQLVLDAVLGTAIVDMYAKSGLFGKAIDVFDRMETKDVKSWTAMISGCGVHGEANEAAT 665
            ++Q+ LDAVLGTA+VDMY K G   KAIDVF+RME KDVKSWTAMISG GVHG+A  A  
Sbjct: 319  EEQIALDAVLGTALVDMYCKCGFLEKAIDVFERMEIKDVKSWTAMISGYGVHGQAKNAIM 378

Query: 664  LFDRMEMEGFAPNEVTFLAVLNSCSHGGLVQEGLSYFKRMVEVYRLMPKIEHYGCLIDLL 485
            +F RME+EG+ PNEVTFLAVLN+CSHGG+V EG+S+ ++MV  Y   PK+EHYGC+IDLL
Sbjct: 379  IFHRMEVEGYRPNEVTFLAVLNACSHGGMVVEGISFLEKMVREYGFSPKVEHYGCMIDLL 438

Query: 484  GRAGHLEEAYEVIKGLPVERDATAWRALLGACRVYGNVDLAEHVREELERTHENHPADLI 305
            GRAG LEEA+ +IK LP+E DAT WRALL ACRVYGNVDL E V+  L    + HP D I
Sbjct: 439  GRAGLLEEAHNLIKSLPIEGDATGWRALLAACRVYGNVDLGECVKRVLLEIFDEHPTDSI 498

Query: 304  TLASTYAVAGMLPHHEYLSYKMLKENDNESSAKKEAGC 191
             L+STYA+AG LP  +Y   + +K    E    KEAGC
Sbjct: 499  LLSSTYAIAGRLP--DYTRMQEIK----EEKMMKEAGC 530



 Score = 70.1 bits (170), Expect = 8e-10
 Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 2/201 (0%)
 Frame = -1

Query: 826 DAVLGTAIVDMYAKSGLFGKAIDVFDRMETKDVKSWTAMISGCGVHGEANEAATLFDRME 647
           D  + TA++DMYA +G       +F ++  KDV  W  +I G        E+ +L   M+
Sbjct: 224 DLNVATALIDMYANAGFIDLGHKIFYQVPKKDVVLWNCLIDGYAKSDLLQESLSLLQLMK 283

Query: 646 MEGFAPNEVTFLAVLNSCSHGGLVQEGLSYFKRMVEVYRLMPKIEHYGCLIDLLGRAGHL 467
            E   PN  T + +L++C+  G    GL      VE  ++         L+D+  + G L
Sbjct: 284 REQVKPNSSTLVGLLSACAAAGASSVGLC-ISNYVEEEQIALDAVLGTALVDMYCKCGFL 342

Query: 466 EEAYEVIKGLPVERDATAWRALLGACRVYGNVDLAEHV--REELERTHENHPADLITLAS 293
           E+A +V + + + +D  +W A++    V+G    A  +  R E+E    N    L  L +
Sbjct: 343 EKAIDVFERMEI-KDVKSWTAMISGYGVHGQAKNAIMIFHRMEVEGYRPNEVTFLAVL-N 400

Query: 292 TYAVAGMLPHHEYLSYKMLKE 230
             +  GM+        KM++E
Sbjct: 401 ACSHGGMVVEGISFLEKMVRE 421


>ref|NP_174012.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75216976|sp|Q9ZVG8.1|PPR60_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At1g26900, mitochondrial; Flags: Precursor
            gi|4262179|gb|AAD14496.1| Hypothetical protein
            [Arabidopsis thaliana] gi|332192635|gb|AEE30756.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            thaliana]
          Length = 572

 Score =  285 bits (729), Expect = 1e-74
 Identities = 150/286 (52%), Positives = 183/286 (63%), Gaps = 3/286 (1%)
 Frame = -1

Query: 1024 WNCLIDGYXXXXXXXXXXXXXXXXKHHTLKPNXXXXXXXXXXXXXXXXXTIGQYVHDYVE 845
            WNC+ID Y                K+  +KPN                  +G+ V D +E
Sbjct: 296  WNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLE 355

Query: 844  QQQLVLDAVLGTAIVDMYAKSGLFGKAIDVFDRMETKDVKSWTAMISGCGVHGEANEAAT 665
            ++++ LDA+LGTA+VDMYAK GL  KA+++F+RM+ KDVKSWTAMISG G HG A EA T
Sbjct: 356  EERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVT 415

Query: 664  LFDRMEMEG--FAPNEVTFLAVLNSCSHGGLVQEGLSYFKRMVEVYRLMPKIEHYGCLID 491
            LF++ME E     PNE+TFL VLN+CSHGGLV EG+  FKRMVE Y   PK+EHYGC++D
Sbjct: 416  LFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVD 475

Query: 490  LLGRAGHLEEAYEVIKGLPVERDATAWRALLGACRVYGNVDLAEHVREELERTHENHPAD 311
            LLGRAG LEEAYE+I+ LP+  D+TAWRALL ACRVYGN DL E V   L    E HPAD
Sbjct: 476  LLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPAD 535

Query: 310  LITLASTYAVAGMLPHHEYLSYKMLKENDNE-SSAKKEAGCSIIEL 176
             I LA T+AVAG             K  DNE +  +KEAG S IE+
Sbjct: 536  AILLAGTHAVAG----------NPEKSLDNELNKGRKEAGYSAIEI 571



 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 52/183 (28%), Positives = 83/183 (45%), Gaps = 4/183 (2%)
 Frame = -1

Query: 835 LVLDAVLGTAIVDMYAKSGLFGKAIDVFDRMETKDVKSWTAMISGCGVHGEANEAATLFD 656
           L LD  L TA++ MY K+G    A  +FD    KDV +W  MI      G   E   L  
Sbjct: 258 LDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLR 317

Query: 655 RMEMEGFAPNEVTFLAVLNSCSHGGLVQEGLSYFKRMVEVYRLMPKIEHYGCLIDLLGRA 476
           +M+ E   PN  TF+ +L+SC++      G +    ++E  R+         L+D+  + 
Sbjct: 318 QMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRT-VADLLEEERIALDAILGTALVDMYAKV 376

Query: 475 GHLEEAYEVIKGLPVERDATAWRALLGACRVYG----NVDLAEHVREELERTHENHPADL 308
           G LE+A E+   +  ++D  +W A++     +G     V L   + EE  +   N    L
Sbjct: 377 GLLEKAVEIFNRMK-DKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFL 435

Query: 307 ITL 299
           + L
Sbjct: 436 VVL 438


>ref|XP_002890625.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297336467|gb|EFH66884.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 568

 Score =  282 bits (721), Expect = 1e-73
 Identities = 148/285 (51%), Positives = 183/285 (64%), Gaps = 2/285 (0%)
 Frame = -1

Query: 1024 WNCLIDGYXXXXXXXXXXXXXXXXKHHTLKPNXXXXXXXXXXXXXXXXXTIGQYVHDYVE 845
            WNC+ID Y                K+  +KPN                  +G+ V D VE
Sbjct: 292  WNCMIDQYAKMGILEECVWLLRQMKYERMKPNSSTFVGLLSSCANSEAAFVGRSVADLVE 351

Query: 844  QQQLVLDAVLGTAIVDMYAKSGLFGKAIDVFDRMETKDVKSWTAMISGCGVHGEANEAAT 665
            ++++ LDA LGTA+VDMYAK G+  KA+++F+RM+ KDVKSWTAMISG G HG A EA T
Sbjct: 352  EERIALDAKLGTALVDMYAKLGMLDKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVT 411

Query: 664  LFDRMEMEG--FAPNEVTFLAVLNSCSHGGLVQEGLSYFKRMVEVYRLMPKIEHYGCLID 491
            LF++ME E     PNE+TFL VLN+CSHGGL+ EG+  FKRMVE Y   PK+EHYGC++D
Sbjct: 412  LFNKMEEENCKVRPNEITFLVVLNACSHGGLIMEGIRCFKRMVEAYSFTPKVEHYGCVVD 471

Query: 490  LLGRAGHLEEAYEVIKGLPVERDATAWRALLGACRVYGNVDLAEHVREELERTHENHPAD 311
            LLGRAG LEEAYE+I+ LP+  D+TAWRALL ACRVYGN DL E V   L    E HPAD
Sbjct: 472  LLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMDEIHPAD 531

Query: 310  LITLASTYAVAGMLPHHEYLSYKMLKENDNESSAKKEAGCSIIEL 176
             I +A T+AVAG          K L  +D  + A+KEAG S IE+
Sbjct: 532  AILIAGTHAVAGN-------PQKSL--DDELNKARKEAGYSAIEI 567



 Score = 72.8 bits (177), Expect = 1e-10
 Identities = 53/181 (29%), Positives = 83/181 (45%), Gaps = 4/181 (2%)
 Frame = -1

Query: 829 LDAVLGTAIVDMYAKSGLFGKAIDVFDRMETKDVKSWTAMISGCGVHGEANEAATLFDRM 650
           LD  L TA++ MY K G  G A  +FD    KDV +W  MI      G   E   L  +M
Sbjct: 256 LDLHLITALIGMYGKIGDIGSARRIFDCAIRKDVVTWNCMIDQYAKMGILEECVWLLRQM 315

Query: 649 EMEGFAPNEVTFLAVLNSCSHGGLVQEGLSYFKRMVEVYRLMPKIEHYGCLIDLLGRAGH 470
           + E   PN  TF+ +L+SC++      G S    +VE  R+    +    L+D+  + G 
Sbjct: 316 KYERMKPNSSTFVGLLSSCANSEAAFVGRS-VADLVEEERIALDAKLGTALVDMYAKLGM 374

Query: 469 LEEAYEVIKGLPVERDATAWRALLGACRVYG----NVDLAEHVREELERTHENHPADLIT 302
           L++A E+   +  ++D  +W A++     +G     V L   + EE  +   N    L+ 
Sbjct: 375 LDKAVEIFNRMK-DKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVV 433

Query: 301 L 299
           L
Sbjct: 434 L 434


>ref|XP_004143729.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26900,
            mitochondrial-like [Cucumis sativus]
          Length = 591

 Score =  266 bits (681), Expect = 5e-69
 Identities = 144/295 (48%), Positives = 185/295 (62%), Gaps = 12/295 (4%)
 Frame = -1

Query: 1024 WNCLIDGYXXXXXXXXXXXXXXXXKHHTLKPNXXXXXXXXXXXXXXXXXTIGQYVHDYVE 845
            WNCLID Y                K   +KPN                 + G+Y+ +Y +
Sbjct: 295  WNCLIDNYAKNGLIKKAVASLHLMKLEGMKPNSSTLAGLISACATSGAVSTGKYLANYAD 354

Query: 844  QQQLVLDAVLGTAIVDMYAKSGLFGKAIDVFDRMETKDVKSWTAMISGCGVHGEANEAAT 665
             + L LD VLGT ++ MYAK G   KAID+FD+M+ KDVK+WTAMI+G G HG+  +   
Sbjct: 355  NEGLDLDVVLGTTLIGMYAKFGFLDKAIDIFDKMKNKDVKTWTAMITGYGDHGQTRKVME 414

Query: 664  LFDRMEMEGFAPNEVTFLAVLNSCSHGGLVQEGLSYFKRMVEVYRLMPKIEHYGCLIDLL 485
               RME EGF PNE+TFLAVLN+ SHGG+V EG+  FKRMV  Y + PKIEHYGC+IDLL
Sbjct: 415  TLYRMEEEGFRPNEITFLAVLNAYSHGGIVAEGMKCFKRMVYEYGITPKIEHYGCIIDLL 474

Query: 484  GRAGHLEEAYEVIKGLP-VERDATAWRALLGACRVYGNVDLAEHVREELERTHENHPADL 308
            GRAG LEEA+++IK LP  + D T WR LL ACRVYG+V+L E V+ +L   ++ HPAD 
Sbjct: 475  GRAGLLEEAHKLIKSLPSTKGDITGWRTLLAACRVYGDVELGETVKRKLVDLNDEHPADS 534

Query: 307  ITLASTYAVAGMLPHHEYLSYKMLKEND-----NESS------AKKEAGCSIIEL 176
            + L+STYA+AG L   +Y  Y++ KE +     N SS      A KEAGCS+IE+
Sbjct: 535  MLLSSTYAIAGRL--SDYTQYQLRKEGNKVKEANGSSQVQIEKAIKEAGCSVIEM 587



 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 57/256 (22%), Positives = 100/256 (39%), Gaps = 4/256 (1%)
 Frame = -1

Query: 1024 WNCLIDGYXXXXXXXXXXXXXXXXKHHTLKPNXXXXXXXXXXXXXXXXXTIGQYVHDYVE 845
            WN L+DGY                    L  N                   G+ ++ +  
Sbjct: 194  WNTLMDGYLRASQPIVVLDTFRQMCRRGLIANTGTLLSVASAVGDVGNTMDGRSLYGHCI 253

Query: 844  QQQLVLDAVLGTAIVDMYAKSGLFGKAIDVFDRMETKDVKSWTAMISGCGVHGEANEAAT 665
            +  L  +  + T ++DMY K G   +A  +F+ +  KDV  W  +I     +G   +A  
Sbjct: 254  KLGLGSNLRVVTCLIDMYGKFGDLDEAGTIFNEVAEKDVIVWNCLIDNYAKNGLIKKAVA 313

Query: 664  LFDRMEMEGFAPNEVTFLAVLNSCSHGGLVQEGLSYFKRMVEVYRLMPKIEHYGCLIDLL 485
                M++EG  PN  T   ++++C+  G V  G  Y     +   L   +     LI + 
Sbjct: 314  SLHLMKLEGMKPNSSTLAGLISACATSGAVSTG-KYLANYADNEGLDLDVVLGTTLIGMY 372

Query: 484  GRAGHLEEAYEVIKGLPVERDATAWRALLGACRVYGNVDLAEHVREELERTHEN--HPAD 311
             + G L++A ++   +   +D   W A++     YG+      V E L R  E    P +
Sbjct: 373  AKFGFLDKAIDIFDKMK-NKDVKTWTAMITG---YGDHGQTRKVMETLYRMEEEGFRPNE 428

Query: 310  LITLA--STYAVAGML 269
            +  LA  + Y+  G++
Sbjct: 429  ITFLAVLNAYSHGGIV 444