BLASTX nr result

ID: Scutellaria24_contig00020824 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00020824
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67815.1| hypothetical protein VITISV_002502 [Vitis vinifera]    80   2e-13
ref|XP_002529848.1| DNA repair and recombination protein RAD26, ...    78   6e-13
emb|CBI37137.3| unnamed protein product [Vitis vinifera]               77   2e-12
ref|XP_002272543.1| PREDICTED: DNA excision repair protein ERCC-...    77   2e-12
ref|XP_002307656.1| chromatin remodeling complex subunit [Populu...    75   4e-12

>emb|CAN67815.1| hypothetical protein VITISV_002502 [Vitis vinifera]
          Length = 1249

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 41/80 (51%), Positives = 51/80 (63%)
 Frame = -3

Query: 309 QLMSEASKARPTTKMLDPESLPKLDAPSRPFQRLGAPLKISRSLXXXXXXXXXXXXXXXR 130
           Q +SE+++ARPTTKMLD E+LPKLDAPS PF RL  PLK    L               R
Sbjct: 296 QSISESAQARPTTKMLDSETLPKLDAPSHPFHRLKKPLKYPLPLDSEVEKNKDKKRKKKR 355

Query: 129 PQPGKKWKRLVSREEKFLGE 70
           P PGKKW++++S EE+ L E
Sbjct: 356 PLPGKKWRKIISHEEELLEE 375


>ref|XP_002529848.1| DNA repair and recombination protein RAD26, putative [Ricinus
           communis] gi|223530676|gb|EEF32549.1| DNA repair and
           recombination protein RAD26, putative [Ricinus communis]
          Length = 1230

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 39/80 (48%), Positives = 51/80 (63%)
 Frame = -3

Query: 309 QLMSEASKARPTTKMLDPESLPKLDAPSRPFQRLGAPLKISRSLXXXXXXXXXXXXXXXR 130
           Q M EA+KARP TK+LD +++PKLDAP+RPFQRL  PL+   SL               R
Sbjct: 273 QSMLEAAKARPVTKLLDSDAVPKLDAPTRPFQRLKTPLQFPHSLENASDKTKGSKRKTKR 332

Query: 129 PQPGKKWKRLVSREEKFLGE 70
           P PG+KW++ ++REE  L E
Sbjct: 333 PLPGQKWRKRITREENHLEE 352


>emb|CBI37137.3| unnamed protein product [Vitis vinifera]
          Length = 1116

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 39/80 (48%), Positives = 50/80 (62%)
 Frame = -3

Query: 309 QLMSEASKARPTTKMLDPESLPKLDAPSRPFQRLGAPLKISRSLXXXXXXXXXXXXXXXR 130
           Q +SE+++ARPTTK+LD E+LPKLDAPS PF RL  PLK    L               R
Sbjct: 274 QSISESAQARPTTKLLDSETLPKLDAPSHPFHRLKKPLKYPLPLDSEVEKNKDKKRKKKR 333

Query: 129 PQPGKKWKRLVSREEKFLGE 70
           P P KKW++++S EE+ L E
Sbjct: 334 PLPSKKWRKIISHEEELLEE 353


>ref|XP_002272543.1| PREDICTED: DNA excision repair protein ERCC-6-like [Vitis vinifera]
          Length = 1227

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 39/80 (48%), Positives = 50/80 (62%)
 Frame = -3

Query: 309 QLMSEASKARPTTKMLDPESLPKLDAPSRPFQRLGAPLKISRSLXXXXXXXXXXXXXXXR 130
           Q +SE+++ARPTTK+LD E+LPKLDAPS PF RL  PLK    L               R
Sbjct: 274 QSISESAQARPTTKLLDSETLPKLDAPSHPFHRLKKPLKYPLPLDSEVEKNKDKKRKKKR 333

Query: 129 PQPGKKWKRLVSREEKFLGE 70
           P P KKW++++S EE+ L E
Sbjct: 334 PLPSKKWRKIISHEEELLEE 353


>ref|XP_002307656.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222857105|gb|EEE94652.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 1206

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 42/82 (51%), Positives = 51/82 (62%)
 Frame = -3

Query: 303 MSEASKARPTTKMLDPESLPKLDAPSRPFQRLGAPLKISRSLXXXXXXXXXXXXXXXRPQ 124
           M EA+KARPTTK+LD E+LPKLDAP+RPFQRL  PLK  +S                RP 
Sbjct: 272 MLEAAKARPTTKLLDSEALPKLDAPTRPFQRLKTPLKACQSPERDAEKRKGSERKRKRPL 331

Query: 123 PGKKWKRLVSREEKFLGEGGTS 58
           PGKKW++  S E+  +GE   S
Sbjct: 332 PGKKWRKSASWED--MGESEDS 351


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