BLASTX nr result

ID: Scutellaria24_contig00020770 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00020770
         (950 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551914.1| PREDICTED: probable rhamnose biosynthetic en...    79   1e-12
ref|XP_002271970.1| PREDICTED: probable rhamnose biosynthetic en...    76   1e-11
ref|XP_002894444.1| mucilage-modified 4 [Arabidopsis lyrata subs...    76   1e-11
gb|AAK82539.1| At1g53500/F22G10_13 [Arabidopsis thaliana] gi|250...    75   2e-11
ref|NP_564633.2| UDP-glucose 4,6-dehydratase [Arabidopsis thalia...    75   2e-11

>ref|XP_003551914.1| PREDICTED: probable rhamnose biosynthetic enzyme 1-like [Glycine
           max]
          Length = 660

 Score = 79.3 bits (194), Expect = 1e-12
 Identities = 35/56 (62%), Positives = 41/56 (73%), Gaps = 5/56 (8%)
 Frame = +3

Query: 6   WDEGLRKTMDWYVRNPDWWGDVSAALHPHPRMLSFPSL-----GKDHLKLGALNSD 158
           W+EGLRKTMDWYV+NPDWWGDVS AL PHPRML+ P +     G D++   A N D
Sbjct: 310 WEEGLRKTMDWYVKNPDWWGDVSGALLPHPRMLTMPGVEKYYDGSDNVTGTASNGD 365


>ref|XP_002271970.1| PREDICTED: probable rhamnose biosynthetic enzyme 1 [Vitis vinifera]
          Length = 657

 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 34/65 (52%), Positives = 47/65 (72%), Gaps = 2/65 (3%)
 Frame = +3

Query: 6   WDEGLRKTMDWYVRNPDWWGDVSAALHPHPR--MLSFPSLGKDHLKLGALNSDQDQTACT 179
           W+EGLR+TM+WY +NP WWGDVSAALHPHPR  M++FP+  +  L+ G    D+D +  +
Sbjct: 312 WEEGLRRTMEWYTKNPGWWGDVSAALHPHPRISMIAFPNDDQCFLQYGC---DKDCSPAS 368

Query: 180 KNGSL 194
           K+  L
Sbjct: 369 KSSGL 373


>ref|XP_002894444.1| mucilage-modified 4 [Arabidopsis lyrata subsp. lyrata]
           gi|297340286|gb|EFH70703.1| mucilage-modified 4
           [Arabidopsis lyrata subsp. lyrata]
          Length = 668

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 43/102 (42%), Positives = 57/102 (55%), Gaps = 5/102 (4%)
 Frame = +3

Query: 6   WDEGLRKTMDWYVRNPDWWGDVSAALHPHPRMLSFP----SLGKDHLKLGALNSDQDQTA 173
           W++GL+KTMDWY +NP+WWGDVS AL PHPRML  P    S G    K  + N+ Q  T 
Sbjct: 311 WEDGLKKTMDWYTQNPEWWGDVSGALLPHPRMLMMPGGRLSDGSSEKKDASSNTVQTFTV 370

Query: 174 CTKNGSLSECKSRL*NL*C-RTRLFSISCSRIRLKQGVTHRF 296
            T  G  S  K+ L  L   +T        ++  KQG+T+ +
Sbjct: 371 VTPKGGGSGDKASLKFLIYGKTGWLGGLLGKLCEKQGITYEY 412


>gb|AAK82539.1| At1g53500/F22G10_13 [Arabidopsis thaliana]
           gi|25090317|gb|AAN72275.1| At1g53500/F22G10_13
           [Arabidopsis thaliana]
          Length = 498

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 42/102 (41%), Positives = 57/102 (55%), Gaps = 5/102 (4%)
 Frame = +3

Query: 6   WDEGLRKTMDWYVRNPDWWGDVSAALHPHPRMLSFP----SLGKDHLKLGALNSDQDQTA 173
           W++GL+KTMDWY +NP+WWGDVS AL PHPRML  P    S G    K  + N+ Q  T 
Sbjct: 141 WEDGLKKTMDWYTQNPEWWGDVSGALLPHPRMLMMPGGRLSDGSSEKKDVSSNTVQTFTV 200

Query: 174 CT-KNGSLSECKSRL*NL*CRTRLFSISCSRIRLKQGVTHRF 296
            T KNG   +  S    +  +T        ++  KQG+T+ +
Sbjct: 201 VTPKNGDSGDKASLKFLIYGKTGWLGGLLGKLCEKQGITYEY 242


>ref|NP_564633.2| UDP-glucose 4,6-dehydratase [Arabidopsis thaliana]
           gi|62901054|sp|Q9LPG6.1|RHM2_ARATH RecName:
           Full=Probable rhamnose biosynthetic enzyme 2; AltName:
           Full=NDP-rhamnose synthase; AltName: Full=Protein
           MUCILAGE-MODIFIED 4; AltName: Full=Protein RHAMNOSE
           BIOSYNTHESIS 2; AltName: Full=UDP-L-rhamnose synthase
           MUM4 gi|8671876|gb|AAF78439.1|AC018748_18 Contains
           similarity to dTPD-D-glucose-4,6-dehydratase from
           Sphingomonas sp.S88 gb|U51197 and contains a NAD
           dependent epimerase/dehydratase PF|01370 domain
           [Arabidopsis thaliana]
           gi|12324032|gb|AAG51981.1|AC024260_19 dTDP-D-glucose
           4,6-dehydratase, putative; 102946-105028 [Arabidopsis
           thaliana] gi|31559259|emb|CAD92667.1| putative
           NDP-rhamnose synthase [Arabidopsis thaliana]
           gi|33090264|gb|AAP93963.1| putative UDP-L-rhamnose
           synthase MUM4 [Arabidopsis thaliana]
           gi|332194828|gb|AEE32949.1| UDP-glucose 4,6-dehydratase
           [Arabidopsis thaliana]
          Length = 667

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 42/102 (41%), Positives = 57/102 (55%), Gaps = 5/102 (4%)
 Frame = +3

Query: 6   WDEGLRKTMDWYVRNPDWWGDVSAALHPHPRMLSFP----SLGKDHLKLGALNSDQDQTA 173
           W++GL+KTMDWY +NP+WWGDVS AL PHPRML  P    S G    K  + N+ Q  T 
Sbjct: 310 WEDGLKKTMDWYTQNPEWWGDVSGALLPHPRMLMMPGGRLSDGSSEKKDVSSNTVQTFTV 369

Query: 174 CT-KNGSLSECKSRL*NL*CRTRLFSISCSRIRLKQGVTHRF 296
            T KNG   +  S    +  +T        ++  KQG+T+ +
Sbjct: 370 VTPKNGDSGDKASLKFLIYGKTGWLGGLLGKLCEKQGITYEY 411


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