BLASTX nr result

ID: Scutellaria24_contig00020760 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00020760
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF97835.1|AC034107_18 EST gb|AI997943 comes from this gene [...    98   6e-19
gb|AAF78387.1|AC069551_20 T10O22.16 [Arabidopsis thaliana]             98   6e-19
ref|NP_173257.2| golgin candidate 2 [Arabidopsis thaliana] gi|20...    98   6e-19
ref|XP_002322094.1| predicted protein [Populus trichocarpa] gi|2...    94   9e-18
ref|XP_003524345.1| PREDICTED: golgin candidate 2-like [Glycine ...    90   2e-16

>gb|AAF97835.1|AC034107_18 EST gb|AI997943 comes from this gene [Arabidopsis thaliana]
          Length = 654

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 61/130 (46%), Positives = 84/130 (64%), Gaps = 7/130 (5%)
 Frame = -1

Query: 412 MAHWISSKLKAAETLLQQIDQQAADSLRKNEKQTSDNQLVVETSPKSPETKSLLKDQLKR 233
           MA+WISSKLKAAET+LQQ+DQQAADSLRK+EK  + ++ V ETSPKS  +   LKDQL++
Sbjct: 1   MANWISSKLKAAETILQQLDQQAADSLRKDEKSETHDE-VFETSPKSGSSPVSLKDQLRK 59

Query: 232 KALE-----NGQNIPSDNCDLNLISKSNNDVNRNDEARRLPKLNSKSNPSEG--LTDSDW 74
           K  E     +G    S     + +S S+  V + D++       S+S   +   LTD+DW
Sbjct: 60  KTYEGSDSGSGSQRNSTEQKPSYLS-SSKKVRKPDQSHERTSAPSQSLTQDNTKLTDNDW 118

Query: 73  TELLSVPDKK 44
           TELLS P+++
Sbjct: 119 TELLSTPNQR 128


>gb|AAF78387.1|AC069551_20 T10O22.16 [Arabidopsis thaliana]
          Length = 635

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 61/130 (46%), Positives = 84/130 (64%), Gaps = 7/130 (5%)
 Frame = -1

Query: 412 MAHWISSKLKAAETLLQQIDQQAADSLRKNEKQTSDNQLVVETSPKSPETKSLLKDQLKR 233
           MA+WISSKLKAAET+LQQ+DQQAADSLRK+EK  + ++ V ETSPKS  +   LKDQL++
Sbjct: 1   MANWISSKLKAAETILQQLDQQAADSLRKDEKSETHDE-VFETSPKSGSSPVSLKDQLRK 59

Query: 232 KALE-----NGQNIPSDNCDLNLISKSNNDVNRNDEARRLPKLNSKSNPSEG--LTDSDW 74
           K  E     +G    S     + +S S+  V + D++       S+S   +   LTD+DW
Sbjct: 60  KTYEGSDSGSGSQRNSTEQKPSYLS-SSKKVRKPDQSHERTSAPSQSLTQDNTKLTDNDW 118

Query: 73  TELLSVPDKK 44
           TELLS P+++
Sbjct: 119 TELLSTPNQR 128


>ref|NP_173257.2| golgin candidate 2 [Arabidopsis thaliana]
           gi|205779900|sp|B0F9L7.1|GOGC2_ARATH RecName:
           Full=Golgin candidate 2; Short=AtGC2
           gi|164708706|gb|ABY67250.1| putative golgin-84-like
           protein [Arabidopsis thaliana]
           gi|332191564|gb|AEE29685.1| golgin candidate 2
           [Arabidopsis thaliana]
          Length = 668

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 61/130 (46%), Positives = 84/130 (64%), Gaps = 7/130 (5%)
 Frame = -1

Query: 412 MAHWISSKLKAAETLLQQIDQQAADSLRKNEKQTSDNQLVVETSPKSPETKSLLKDQLKR 233
           MA+WISSKLKAAET+LQQ+DQQAADSLRK+EK  + ++ V ETSPKS  +   LKDQL++
Sbjct: 1   MANWISSKLKAAETILQQLDQQAADSLRKDEKSETHDE-VFETSPKSGSSPVSLKDQLRK 59

Query: 232 KALE-----NGQNIPSDNCDLNLISKSNNDVNRNDEARRLPKLNSKSNPSEG--LTDSDW 74
           K  E     +G    S     + +S S+  V + D++       S+S   +   LTD+DW
Sbjct: 60  KTYEGSDSGSGSQRNSTEQKPSYLS-SSKKVRKPDQSHERTSAPSQSLTQDNTKLTDNDW 118

Query: 73  TELLSVPDKK 44
           TELLS P+++
Sbjct: 119 TELLSTPNQR 128


>ref|XP_002322094.1| predicted protein [Populus trichocarpa] gi|222869090|gb|EEF06221.1|
           predicted protein [Populus trichocarpa]
          Length = 567

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 61/134 (45%), Positives = 75/134 (55%), Gaps = 8/134 (5%)
 Frame = -1

Query: 412 MAHWISSKLKAAETLLQQIDQQAADSLRKNEKQTSDNQLVVETSPKSPETKSLLKDQLKR 233
           MA+WISSKLK AET  +QIDQQAA+SL+KNE+  SD+    +   K+  + S LKDQLK+
Sbjct: 1   MANWISSKLKVAETFFEQIDQQAAESLKKNEQPRSDDDQKFDLPAKAGGSLS-LKDQLKK 59

Query: 232 KALE-NGQNIPSDNCDLNLISKSNNDVNRN-------DEARRLPKLNSKSNPSEGLTDSD 77
           K  E N +     N D  +    NN VN N        E    PK++ K  P   LTDSD
Sbjct: 60  KTHEFNNEYNGKLNADFAINKNKNNVVNNNVFGSVNDKEVLNAPKISPK--PRATLTDSD 117

Query: 76  WTELLSVPDKKGTS 35
           WTELL  P     S
Sbjct: 118 WTELLGTPPSPNAS 131


>ref|XP_003524345.1| PREDICTED: golgin candidate 2-like [Glycine max]
          Length = 689

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 57/120 (47%), Positives = 71/120 (59%)
 Frame = -1

Query: 412 MAHWISSKLKAAETLLQQIDQQAADSLRKNEKQTSDNQLVVETSPKSPETKSLLKDQLKR 233
           M++WISSKLKAAE++L QIDQQAA+SLRKNE   S+   +   +P    +   LKDQLK+
Sbjct: 1   MSNWISSKLKAAESILHQIDQQAAESLRKNEGFRSEEPSI--DAPAKSGSGVSLKDQLKK 58

Query: 232 KALENGQNIPSDNCDLNLISKSNNDVNRNDEARRLPKLNSKSNPSEGLTDSDWTELLSVP 53
           K LE+ +       DLN         N        PKL+ KS P+  LTD DWTELLS P
Sbjct: 59  KPLESNEYRGKLRSDLNF--------NGLKATASAPKLSPKSGPT--LTDDDWTELLSAP 108


Top