BLASTX nr result

ID: Scutellaria24_contig00020737 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00020737
         (922 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608851.1| F-box family-6 [Medicago truncatula] gi|3555...    71   3e-10
ref|XP_004138258.1| PREDICTED: putative FBD-associated F-box pro...    59   2e-06

>ref|XP_003608851.1| F-box family-6 [Medicago truncatula] gi|355509906|gb|AES91048.1|
           F-box family-6 [Medicago truncatula]
          Length = 447

 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 4/172 (2%)
 Frame = +1

Query: 1   GDFTDILSNAFDMFWDCLPQIEIFTIERVGH----FYWIDTDFCSDVCLSNLKLLVIKQE 168
           G F + +  +F      LPQI++  ++   +     YW+         L NLK L    E
Sbjct: 273 GSFVEFVRESF------LPQIKVLKLDITQNSPEVIYWLS----QLPKLKNLKHL----E 318

Query: 169 IFSLKDYSLLPLSSILRASPRLQRFVLETMRWYPEFCNRRIYRFEGWYPHLKEVEIVGYC 348
           + +  D  +     +L+ASP L R  ++ +   P +     +  E  Y +LKE+E+VG+C
Sbjct: 319 LVACADDGISACVMLLKASPSLWRLKIKMLNTKPTYITEHKFTMECHY-NLKELELVGFC 377

Query: 349 SVTSEIELVQHFTESAVALEKITIDPRKPCKAPMEVKPSTDRRLSTWRLDPR 504
               E+ELV +  E+   L+KITID R P K   +++P  +    TW L+ +
Sbjct: 378 GAACEVELVMYILENTDELQKITIDTRLPTKP--KLRPLDEEHFETWDLEEK 427


>ref|XP_004138258.1| PREDICTED: putative FBD-associated F-box protein At5g56700-like
           [Cucumis sativus] gi|449501454|ref|XP_004161371.1|
           PREDICTED: putative FBD-associated F-box protein
           At5g56700-like [Cucumis sativus]
          Length = 475

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 39/103 (37%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
 Frame = +1

Query: 133 LSNLKLLVIKQEIFSLKDYSLLPLSSILRASPRLQRFVLETMRWYPEFCNRRIYRFEGWY 312
           L  LKL+VI +        SL+  +S+++ASP L +F L+    Y +   +R  R    +
Sbjct: 342 LKELKLIVIAEG-----HSSLIGFTSLIKASPSLLKFTLKLD--YLDMFEQRPLRKVKKF 394

Query: 313 PH--LKEVEIVGYCSVTSEIELVQHFTESAVALEKITIDPRKP 435
           PH  +K VE+ G+     ++ELVQ+F ++AVALE+I  D RKP
Sbjct: 395 PHQYIKVVELAGFVGKPIDLELVQYFHKNAVALEEIIFDTRKP 437


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