BLASTX nr result

ID: Scutellaria24_contig00020732 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00020732
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516323.1| ATP binding protein, putative [Ricinus commu...   142   3e-32
ref|XP_002264260.1| PREDICTED: DNA excision repair protein ERCC-...   135   5e-30
ref|XP_002309928.1| chromatin remodeling complex subunit [Populu...   129   3e-28
ref|XP_002866584.1| hypothetical protein ARALYDRAFT_496587 [Arab...   118   6e-25
ref|NP_201200.2| protein chromatin remodeling 24 [Arabidopsis th...   116   2e-24

>ref|XP_002516323.1| ATP binding protein, putative [Ricinus communis]
            gi|223544553|gb|EEF46070.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 1109

 Score =  142 bits (358), Expect = 3e-32
 Identities = 76/142 (53%), Positives = 99/142 (69%), Gaps = 1/142 (0%)
 Frame = -1

Query: 425  LKTHVEFLETLNIAGVSQHSLLFSKAAPVQAIEIEEEPARLRGTTFMGNRYTRPSLEENV 246
            L+THV FLE L IAGVS HSLLFSK APVQ + IEEE  R + T F+GN  +R ++E NV
Sbjct: 952  LETHVNFLERLGIAGVSHHSLLFSKTAPVQVVNIEEEEMRDKVTAFVGNS-SRTTVERNV 1010

Query: 245  DGSQYAFKPKDVMKVQKNSSPD-VRESTEAELRGRIDRLSQIFSNQVAVSRLPDKGEKIQ 69
            DG+ YA  PKDV   +K+ SP+ V + TE+E++ RI RLSQ+  N   VSRLPD+G K+Q
Sbjct: 1011 DGAVYALNPKDVKLNKKSCSPENVGKLTESEIKERISRLSQLLGNMATVSRLPDRGAKLQ 1070

Query: 68   KQIDSLNLVLEQMQIANRNKND 3
            KQI  LNL L+++ +    K +
Sbjct: 1071 KQISDLNLELDKINMEKSTKEE 1092


>ref|XP_002264260.1| PREDICTED: DNA excision repair protein ERCC-6-like [Vitis vinifera]
            gi|296088517|emb|CBI37508.3| unnamed protein product
            [Vitis vinifera]
          Length = 1043

 Score =  135 bits (339), Expect = 5e-30
 Identities = 75/140 (53%), Positives = 101/140 (72%), Gaps = 3/140 (2%)
 Frame = -1

Query: 425  LKTHVEFLETLNIAGVSQHSLLFSKAAPVQAIEIEEEPARLR--GTTFMGNRYTRPSLEE 252
            LK H++FLET  IAGVS H+LLFSK A V  ++ EEE AR    GTT + N+    S E+
Sbjct: 883  LKEHIKFLETQGIAGVSHHNLLFSKTARVLVVDEEEEVARASRTGTTSVMNKSAGSSHEQ 942

Query: 251  NVDGSQYAFKPKDVMKVQKNSSPD-VRESTEAELRGRIDRLSQIFSNQVAVSRLPDKGEK 75
            +V+ +QYAFKPK+V   + NSS D   + TE+E++GRI+RLSQI +N+  VS+LPDKGE+
Sbjct: 943  DVEWAQYAFKPKEVNLHKTNSSADSAGKLTESEIKGRINRLSQILANKATVSKLPDKGER 1002

Query: 74   IQKQIDSLNLVLEQMQIANR 15
            IQKQI  LNL L++M++  R
Sbjct: 1003 IQKQIAELNLELDKMRMTKR 1022


>ref|XP_002309928.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222852831|gb|EEE90378.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 1108

 Score =  129 bits (323), Expect = 3e-28
 Identities = 70/142 (49%), Positives = 97/142 (68%), Gaps = 1/142 (0%)
 Frame = -1

Query: 425  LKTHVEFLETLNIAGVSQHSLLFSKAAPVQAIEIEEEPARLRGTTFMGNRYTRPSLEENV 246
            L++H++FLE+  IAGVS HSLLFSK   VQ  + EE+  R + +T +GN  +  SLE NV
Sbjct: 949  LESHIKFLESQGIAGVSHHSLLFSKTETVQLAQEEEDEIRKKVSTMVGNSSSSYSLERNV 1008

Query: 245  DGSQYAFKPKDVMKVQKNSSPD-VRESTEAELRGRIDRLSQIFSNQVAVSRLPDKGEKIQ 69
            DG+  AF PKDV   +K SSPD V + TE+E+  RI+RLSQ+  N+V V RLPD+G K+Q
Sbjct: 1009 DGAARAFNPKDVNLNKKTSSPDSVGKLTESEILERINRLSQLLGNKVTVLRLPDQGAKLQ 1068

Query: 68   KQIDSLNLVLEQMQIANRNKND 3
            KQI  LN VL ++++    + +
Sbjct: 1069 KQISELNSVLIELRMEKATERE 1090


>ref|XP_002866584.1| hypothetical protein ARALYDRAFT_496587 [Arabidopsis lyrata subsp.
            lyrata] gi|297312419|gb|EFH42843.1| hypothetical protein
            ARALYDRAFT_496587 [Arabidopsis lyrata subsp. lyrata]
          Length = 1097

 Score =  118 bits (295), Expect = 6e-25
 Identities = 70/140 (50%), Positives = 93/140 (66%), Gaps = 3/140 (2%)
 Frame = -1

Query: 425  LKTHVEFLETLNIAGVSQHSLLFSKAAPVQAIE-IEEEPARLRGTTFMGNRYTRPSLEEN 249
            L++HV+FLETL IAGVS HSLLFSK AP+QAI+  EEE  R     F G      S +  
Sbjct: 935  LESHVKFLETLGIAGVSHHSLLFSKTAPIQAIQKDEEEEIRRETALFSGRPSASISQDTV 994

Query: 248  VDGSQYAFKPKDVMKVQK-NSSP-DVRESTEAELRGRIDRLSQIFSNQVAVSRLPDKGEK 75
            ++G+ YAFKPKDV   +K N SP D +E +E+E++ R++RL+ +  N+  VSRLPD G K
Sbjct: 995  INGADYAFKPKDVNLDKKINISPIDDKELSESEIKARLNRLTILLQNKDTVSRLPDGGAK 1054

Query: 74   IQKQIDSLNLVLEQMQIANR 15
            IQKQI  L   L+ ++ A R
Sbjct: 1055 IQKQIAELTRELKDLKAAER 1074


>ref|NP_201200.2| protein chromatin remodeling 24 [Arabidopsis thaliana]
            gi|18087573|gb|AAL58917.1|AF462829_1 AT5g63950/MBM17_5
            [Arabidopsis thaliana] gi|22655364|gb|AAM98274.1|
            At5g63950/MBM17_5 [Arabidopsis thaliana]
            gi|332010436|gb|AED97819.1| protein chromatin remodeling
            24 [Arabidopsis thaliana]
          Length = 1090

 Score =  116 bits (290), Expect = 2e-24
 Identities = 68/140 (48%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
 Frame = -1

Query: 425  LKTHVEFLETLNIAGVSQHSLLFSKAAPVQAIE-IEEEPARLRGTTFMGNRYTRPSLEEN 249
            L++HV+FLETL IAGVS HSLLFSK AP+QAI+  EEE  R      +G      S +  
Sbjct: 928  LESHVKFLETLGIAGVSHHSLLFSKTAPIQAIQKDEEEQIRRETALLLGRASASISQDTV 987

Query: 248  VDGSQYAFKPKDV-MKVQKNSSP-DVRESTEAELRGRIDRLSQIFSNQVAVSRLPDKGEK 75
            ++G+ YAFKPKDV +  + N SP D +E +E+ ++ R++RL+ +  N+  VSRLPD G K
Sbjct: 988  INGADYAFKPKDVNLDKRINISPVDDKELSESVIKARLNRLTMLLQNKGTVSRLPDGGAK 1047

Query: 74   IQKQIDSLNLVLEQMQIANR 15
            IQKQI  L   L+ M+ A R
Sbjct: 1048 IQKQIAELTRELKDMKAAER 1067


Top