BLASTX nr result

ID: Scutellaria24_contig00020692 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00020692
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526119.1| ubiquitin-protein ligase, putative [Ricinus ...    80   2e-13
ref|XP_003534732.1| PREDICTED: F-box protein CPR30-like [Glycine...    73   2e-11
ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ...    73   2e-11
ref|XP_003546182.1| PREDICTED: F-box protein CPR30-like [Glycine...    70   1e-10
ref|XP_003594237.1| F-box protein [Medicago truncatula] gi|35548...    70   2e-10

>ref|XP_002526119.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223534616|gb|EEF36313.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 414

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 52/163 (31%), Positives = 81/163 (49%), Gaps = 4/163 (2%)
 Frame = +1

Query: 1   LLRFRCVSRAWRDTIDDSIFVRSHLRRQIDVGQ---LILTGDLCPWLYSLSLNSPNCEII 171
           LLRFR +S++W   IDD  F+++HL++  +      LI  G    + Y+++L+S N  I 
Sbjct: 22  LLRFRSISKSWCAKIDDPNFIKTHLKKSRETNSNLTLIFAGSHPDYFYNVNLDSLNSIIK 81

Query: 172 KAMPLNHNPCHEGNKPPVGSCNGVLLISDLKGYHFLWNPNTREVHRLXXXXXXXXXXXTG 351
              P+        N   VGSCNG+L   +  G   L NP+TR+   L             
Sbjct: 82  LENPIKGPTDASHNIKIVGSCNGLLCFGNASGRITLMNPSTRKHKVLPFLRMDASVKGKS 141

Query: 352 LYLS-KCGLGFDSASDDYKVVKIAQVFDPRNRILNSETYLYSL 477
           ++ +   G G DS  DDYKV+++ Q  D   +   ++T +YSL
Sbjct: 142 VWGAWAFGFGCDSVHDDYKVIRLGQYLDFSLQQFETDTMVYSL 184


>ref|XP_003534732.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 392

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 56/169 (33%), Positives = 82/169 (48%), Gaps = 10/169 (5%)
 Frame = +1

Query: 1   LLRFRCVSRAWRDTIDDSIFVRSHLRRQIDVGQ-----LILTGDLCPWLYSLSLNSPNCE 165
           LLRFR  S++W+  ID   F   HL R + +       L L  DL         N P  +
Sbjct: 22  LLRFRSTSKSWKSLIDSQHFNSVHLSRSLSLTSNTTLILRLDSDL------YQTNFPTLD 75

Query: 166 IIKAMPLNHN-PCHEGNKPPVGSCNGVLLISDLKGYHFLWNPNTREVHRLXXXXXXXXXX 342
               + LNH   C+  N   +GSCNG+L IS++      WNP+ R+ HR+          
Sbjct: 76  --PPLFLNHPLMCYSNNITLLGSCNGLLCISNVADDIAFWNPSLRQ-HRILPSLPLPRRR 132

Query: 343 X---TGLYLSKC-GLGFDSASDDYKVVKIAQVFDPRNRILNSETYLYSL 477
               T L+ ++  G GFD  S DYK+V+I+   D ++R  +S+  LY+L
Sbjct: 133 LHPDTTLFAARVYGFGFDHTSPDYKLVRISYFVDLQDRSFDSQVKLYTL 181


>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 389

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 54/163 (33%), Positives = 78/163 (47%), Gaps = 4/163 (2%)
 Frame = +1

Query: 1   LLRFRCVSRAWRDTIDDSIFVRSHLRRQIDVGQLILTGDLCPWLYSLSLNSPNCEIIKAM 180
           LL  RCVS+ WR  ID   F+  HL   I+    +        LYSLS +     +    
Sbjct: 21  LLCCRCVSKRWRTLIDSPTFIYLHLNHSIESPCNLSIILKSSELYSLSFDL----LDNIQ 76

Query: 181 PLNHN-PCHEGNKPPVGSCNGVLLISDLKGYHFLWNPNTREVHRLXXXXXXXXXXXTGLY 357
           PL+H   C+      +GSCNG+L I ++     LWNP+ R  HR+            G+ 
Sbjct: 77  PLDHPLMCYNHGVKILGSCNGLLCICNIVDDIALWNPSIR-AHRVVPYLPVELKRYFGMC 135

Query: 358 ---LSKCGLGFDSASDDYKVVKIAQVFDPRNRILNSETYLYSL 477
              +S  G G+D ++DDYK+V+IAQ      +   SE  ++SL
Sbjct: 136 SCRVSVFGFGYDLSNDDYKLVRIAQFGGVDRKSFESEVKVFSL 178


>ref|XP_003546182.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 394

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 56/166 (33%), Positives = 83/166 (50%), Gaps = 7/166 (4%)
 Frame = +1

Query: 1   LLRFRCVSRAWRDTIDDSIFVRSHLRRQIDVGQ---LILTGDLCPWLYSLSLNSPNCEII 171
           LLRFR  S++W+  ID       HL R + +     LIL  D    LY    N P  +  
Sbjct: 22  LLRFRSTSKSWKSLIDSQHLNWLHLTRSLTLTSNTSLILRVDSD--LYQT--NFPTLD-- 75

Query: 172 KAMPLNHN-PCHEGNKPPVGSCNGVLLISDLKGYHFLWNPNTREVHRLXXXXXXXXXXX- 345
             + LNH   C+  +   +GSCNG+L IS++      WNP+ R+ HR+            
Sbjct: 76  PPVSLNHPLMCYSNSITLLGSCNGLLCISNVADDIAFWNPSLRQ-HRILPYLPVPRRRHP 134

Query: 346 -TGLYLSK-CGLGFDSASDDYKVVKIAQVFDPRNRILNSETYLYSL 477
            T L+ ++ CG GFD  + DYK+V+I+   D  +R  +S+  LY+L
Sbjct: 135 DTTLFAARVCGFGFDHKTRDYKLVRISYFVDLHDRSFDSQVKLYTL 180


>ref|XP_003594237.1| F-box protein [Medicago truncatula] gi|355483285|gb|AES64488.1|
           F-box protein [Medicago truncatula]
          Length = 391

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 53/165 (32%), Positives = 83/165 (50%), Gaps = 4/165 (2%)
 Frame = +1

Query: 1   LLRFRCVSRAWRDTIDDSIFVRSHLRRQIDVGQLILTGDLCPWLYSLSLNSPNCEIIKAM 180
           LLRFR  S++ +  ID   F   HL+   +   +I        LY L    PN  +   +
Sbjct: 21  LLRFRSTSKSLKSIIDSHTFTNLHLKNSNNFYLIIRHNAN---LYQLDF--PN--LTPPI 73

Query: 181 PLNHNPCHEGNKPPV-GSCNGVLLISDLKGYHFLWNPNTREVHRLXXXXXXXXXXX--TG 351
           PLNH      N+  + GSCNG++ IS++      WNPN R+ HR+             T 
Sbjct: 74  PLNHPLMSYSNRITLFGSCNGLICISNIADDIAFWNPNIRK-HRIIPYLPTTPRSESDTT 132

Query: 352 LYLSKC-GLGFDSASDDYKVVKIAQVFDPRNRILNSETYLYSLNL 483
           L+ ++  G G+DS + DYK+V+I+   D +NR  +S+  ++SL +
Sbjct: 133 LFAARVHGFGYDSFAGDYKLVRISYFVDLQNRSFDSQVRVFSLKM 177


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