BLASTX nr result

ID: Scutellaria24_contig00020673 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00020673
         (808 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328701.1| predicted protein [Populus trichocarpa] gi|2...   240   3e-61
ref|XP_002528999.1| ATP-dependent RNA helicase, putative [Ricinu...   238   9e-61
ref|XP_002263889.1| PREDICTED: ATP-dependent RNA helicase DHX29 ...   221   1e-55
ref|XP_003550454.1| PREDICTED: ATP-dependent RNA helicase DHX29-...   220   3e-55
ref|XP_002888226.1| helicase domain-containing protein [Arabidop...   210   3e-52

>ref|XP_002328701.1| predicted protein [Populus trichocarpa] gi|222838999|gb|EEE77350.1|
            predicted protein [Populus trichocarpa]
          Length = 870

 Score =  240 bits (612), Expect = 3e-61
 Identities = 132/267 (49%), Positives = 177/267 (66%), Gaps = 2/267 (0%)
 Frame = -3

Query: 800  DAVSRCDKEGDAAPTEFLGVDQKGVGTSSSHEYSIDTASISINQQNKDILENKSDDVELG 621
            +A++  D EGD+   E + VD+  + +SSS  + ++    S+  +  +I+  +S+DVE+G
Sbjct: 296  EAITSLDVEGDSTIVESI-VDENDLESSSSIGFPLNPVPSSVPLEG-EIVSEESEDVEIG 353

Query: 620  DFFVEDSSPDQPLPPVVLEIQXXXXXXXXXXXXXXXXXEGIWKKGDPKKIPKAVLHQLCQ 441
            DFF++D+S +  LPP +LE+Q                 EGIWKKGDP+KIPKAVLHQLCQ
Sbjct: 354  DFFIDDASSNDALPPGILELQKREKMRELCSEKNLEKLEGIWKKGDPQKIPKAVLHQLCQ 413

Query: 440  KSGWEAPKYDKVPXXXXXXXXXXSVLRKASGRGKSRKAGGLTTIQLPSPDESL-NTEDAQ 264
            KSGWEAPK++KV           S+LRKASGRGKSRKAGGL ++QLP  D++  + EDAQ
Sbjct: 414  KSGWEAPKFNKVLERELGFSYAVSILRKASGRGKSRKAGGLISLQLPDQDDTFESAEDAQ 473

Query: 263  NRVAVYALHCLFPDLPVHFALSEPYASLLLKWKEGELLTTVTDKPEDRRAGFVDSLLNAD 84
            NRVA +ALH LFPDLP+H A+  PY+SL+L+WK+GE    V D  EDRRAGFVD LL AD
Sbjct: 474  NRVAAFALHQLFPDLPIHLAIINPYSSLVLQWKQGETSKRVEDSVEDRRAGFVDLLLKAD 533

Query: 83   -KSEHAVETDLIDTSHQKMIQIPHIVE 6
              S  AV+     TS Q+ ++I  + E
Sbjct: 534  GSSSSAVDA---TTSSQETLKITDVEE 557


>ref|XP_002528999.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223531539|gb|EEF33369.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1509

 Score =  238 bits (608), Expect = 9e-61
 Identities = 125/229 (54%), Positives = 158/229 (68%), Gaps = 1/229 (0%)
 Frame = -3

Query: 761  PTEFLGVDQKGVGTSSSHEYSIDTASISINQQNKDILENKSDDVELGDFFVEDSSPDQPL 582
            P+E L  D   + + S  E+ ++ A  S+  Q K  LE+++ D+ELG FF+ED++ ++ L
Sbjct: 314  PSEELPADPNDMESPSYMEFPVELAPSSVPVQGKIDLEDETADMELGGFFMEDATSNEAL 373

Query: 581  PPVVLEIQXXXXXXXXXXXXXXXXXEGIWKKGDPKKIPKAVLHQLCQKSGWEAPKYDKVP 402
            PP VLE+Q                 +GIWKKGDPKKIPKAVLHQLCQKSGWEAPK+ KV 
Sbjct: 374  PPEVLELQKKEKMKKLSSEKNLEKLDGIWKKGDPKKIPKAVLHQLCQKSGWEAPKFKKVH 433

Query: 401  XXXXXXXXXXSVLRKASGRGKSRKAGGLTTIQLPSPDESL-NTEDAQNRVAVYALHCLFP 225
                      S+LRKASGRGKSRKAGGL T+QLP  DE+  + EDAQNR+A +ALH LFP
Sbjct: 434  ERRKGFSYSVSILRKASGRGKSRKAGGLITLQLPDQDETYESAEDAQNRIAAFALHQLFP 493

Query: 224  DLPVHFALSEPYASLLLKWKEGELLTTVTDKPEDRRAGFVDSLLNADKS 78
            DLPVH  +S+PY SL+L+WKEGE  + V +  +DRRAGFVD LLNAD+S
Sbjct: 494  DLPVHLIVSDPYDSLILQWKEGESSSKVENTVDDRRAGFVDWLLNADES 542


>ref|XP_002263889.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Vitis vinifera]
            gi|297739540|emb|CBI29722.3| unnamed protein product
            [Vitis vinifera]
          Length = 1458

 Score =  221 bits (563), Expect = 1e-55
 Identities = 127/269 (47%), Positives = 168/269 (62%), Gaps = 3/269 (1%)
 Frame = -3

Query: 800  DAVSRCDKEGDAA--PTEFLGVDQKGVGTSSSHEYSIDTASISINQQNKDILENKSDDVE 627
            +A++ C+ EG +   P+E    D       SS E S+++ S S+  + +   +  S DVE
Sbjct: 299  EAITLCEVEGGSVMHPSEST-FDGSIKECFSSTELSMNSVSSSVPLEERIAAQEDSGDVE 357

Query: 626  LGDFFVEDSSPDQPLPPVVLEIQXXXXXXXXXXXXXXXXXEGIWKKGDPKKIPKAVLHQL 447
            L +FF ED+   + LP  VL++Q                 EGIWKKGDP+KIPKAVLHQL
Sbjct: 358  LSNFF-EDAPSSEVLPHEVLKLQNKEKMKELSSGKNLEKLEGIWKKGDPQKIPKAVLHQL 416

Query: 446  CQKSGWEAPKYDKVPXXXXXXXXXXSVLRKASGRGKSRKAGGLTTIQLPSPDESL-NTED 270
            CQ+SGWEAPK +KV           SVLRK++GRGKSRKAGGLTT++LP   E+  + ED
Sbjct: 417  CQRSGWEAPKLNKVLGKENGFCYAVSVLRKSTGRGKSRKAGGLTTLELPDQLEAFESAED 476

Query: 269  AQNRVAVYALHCLFPDLPVHFALSEPYASLLLKWKEGELLTTVTDKPEDRRAGFVDSLLN 90
            AQN VA YAL+ LFPDLP+H A++EPYAS +++WKEGE    + D  EDRRAGFV+S+L+
Sbjct: 477  AQNAVAAYALYQLFPDLPIHLAITEPYASFVIQWKEGESSIRIEDSEEDRRAGFVNSILD 536

Query: 89   ADKSEHAVETDLIDTSHQKMIQIPHIVEH 3
            A  S      D+ D S  K  Q+P I E+
Sbjct: 537  AGDSGSTAFVDVTDNSLPKKFQMPQIEEN 565


>ref|XP_003550454.1| PREDICTED: ATP-dependent RNA helicase DHX29-like [Glycine max]
          Length = 1528

 Score =  220 bits (560), Expect = 3e-55
 Identities = 119/248 (47%), Positives = 161/248 (64%), Gaps = 2/248 (0%)
 Frame = -3

Query: 785  CDKEGDAA-PTEFLGVDQKGVGTSSSHEYSIDTASISINQQNKDILENKSDDVELGDFFV 609
            CD EG A+  TE   V +  V + S  E+ + + S+ ++ + KD  + +  D+ELG  F+
Sbjct: 287  CDTEGLASGKTE---VAESDVESHSMVEHLVKSGSLVVHVE-KDSAQGEVGDIELGGLFL 342

Query: 608  EDSSPDQPLPPVVLEIQXXXXXXXXXXXXXXXXXEGIWKKGDPKKIPKAVLHQLCQKSGW 429
            ED+SP + LPP +L++Q                  GIWKKGDP+KIPKAVLHQLCQKSGW
Sbjct: 343  EDASPSEILPPDILKVQKQEKIRRLSEKNLDKLD-GIWKKGDPQKIPKAVLHQLCQKSGW 401

Query: 428  EAPKYDKVPXXXXXXXXXXSVLRKASGRGKSRKAGGLTTIQLPSPDESL-NTEDAQNRVA 252
            EAPK+DK+           S+LRKASGRGK+RKAGGL T+QLP  +E++ + EDAQN+VA
Sbjct: 402  EAPKFDKILGRGKIFSYTVSILRKASGRGKNRKAGGLVTLQLPDQNETVESAEDAQNKVA 461

Query: 251  VYALHCLFPDLPVHFALSEPYASLLLKWKEGELLTTVTDKPEDRRAGFVDSLLNADKSEH 72
             YAL+ LFPD+PVH  ++EPY  L++KW EGE  T + D  ++ R+GFVDSLLN + S  
Sbjct: 462  AYALYKLFPDIPVHLPITEPYTLLIMKWMEGESSTNLEDSEKNHRSGFVDSLLNDNSSAA 521

Query: 71   AVETDLID 48
                D+ D
Sbjct: 522  TASVDVTD 529


>ref|XP_002888226.1| helicase domain-containing protein [Arabidopsis lyrata subsp. lyrata]
            gi|297334067|gb|EFH64485.1| helicase domain-containing
            protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1458

 Score =  210 bits (535), Expect = 3e-52
 Identities = 114/239 (47%), Positives = 149/239 (62%), Gaps = 3/239 (1%)
 Frame = -3

Query: 749  LGVDQKGVGTSSSHEYSIDTASISINQQNKDIL--ENKSDDVELGDFFVEDSSPDQPLPP 576
            L +D    G+  S E  I T ++  +   +D++  +  S+DVELGD F E+  P +  P 
Sbjct: 318  LTLDANPAGSCESEE--IQTKALPSSSSGQDLVASDEDSEDVELGDTFFEEIPPSEISPH 375

Query: 575  VVLEIQXXXXXXXXXXXXXXXXXEGIWKKGDPKKIPKAVLHQLCQKSGWEAPKYDKVPXX 396
             +LE+Q                 +GIWKKGD +KIPKA LHQLCQ+SGWEAPK++KV   
Sbjct: 376  ELLELQKEEKMRELRSEKNLGKLDGIWKKGDAQKIPKAFLHQLCQRSGWEAPKFNKVTGE 435

Query: 395  XXXXXXXXSVLRKASGRGKSRKAGGLTTIQLPSPDESLNT-EDAQNRVAVYALHCLFPDL 219
                    S+LRKASGRGK+R+AGGL T+QLP  D++  + EDAQN+VA +ALH LF DL
Sbjct: 436  ERNFSYAVSILRKASGRGKNRQAGGLVTLQLPLKDDNFESIEDAQNKVAAFALHKLFSDL 495

Query: 218  PVHFALSEPYASLLLKWKEGELLTTVTDKPEDRRAGFVDSLLNADKSEHAVETDLIDTS 42
            PVHFA++EPYASL+L WK+ ELL T+    EDRRA FVD LL  D       +  ID +
Sbjct: 496  PVHFAITEPYASLVLNWKQEELLCTIQSTEEDRRANFVDKLLEEDNFSLTASSSSIDNA 554


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