BLASTX nr result

ID: Scutellaria24_contig00020662 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00020662
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containi...   205   3e-51
ref|XP_002315764.1| predicted protein [Populus trichocarpa] gi|2...   197   6e-49
ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containi...   192   2e-47
ref|XP_002868248.1| pentatricopeptide repeat-containing protein ...   192   2e-47
ref|XP_003610734.1| Pentatricopeptide repeat-containing protein ...   191   4e-47

>ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
           [Vitis vinifera] gi|297737070|emb|CBI26271.3| unnamed
           protein product [Vitis vinifera]
          Length = 727

 Score =  205 bits (522), Expect = 3e-51
 Identities = 95/119 (79%), Positives = 107/119 (89%)
 Frame = +2

Query: 5   PNWVTFVGVLCACSHAGLVEEGQKAFESMVNEYRITPKAEHYGCMVDLYGRANRLTDALE 184
           PN +TFVGVL ACSHAGLVEEG+K F SM+NE+ ITPK  HYGCMVDL+GRAN L +ALE
Sbjct: 454 PNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALE 513

Query: 185 IVETMPMAPNVVIWGSLMAACRIHGEFELGEFAAKRLLEIDPDHDGAHVFLSNIYAKEK 361
           +VE MP+APNV+IWGSLMAACR+HGE ELGEFAAKRLLE+DPDHDGAHVFLSNIYAK +
Sbjct: 514 LVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAHVFLSNIYAKAR 572


>ref|XP_002315764.1| predicted protein [Populus trichocarpa] gi|222864804|gb|EEF01935.1|
           predicted protein [Populus trichocarpa]
          Length = 452

 Score =  197 bits (502), Expect = 6e-49
 Identities = 94/119 (78%), Positives = 107/119 (89%)
 Frame = +2

Query: 5   PNWVTFVGVLCACSHAGLVEEGQKAFESMVNEYRITPKAEHYGCMVDLYGRANRLTDALE 184
           PN VTFVGVL ACSHAGLVEEG++ F SM NE+ ITPK EHYGCMVDL+GRAN L DALE
Sbjct: 179 PNGVTFVGVLYACSHAGLVEEGRRTFASMTNEHNITPKHEHYGCMVDLFGRANLLRDALE 238

Query: 185 IVETMPMAPNVVIWGSLMAACRIHGEFELGEFAAKRLLEIDPDHDGAHVFLSNIYAKEK 361
           +VETMP+APNVVIWGSLMAAC+IHGE ELGEFAAK++LE++PDHDGA V LSNIYAK++
Sbjct: 239 LVETMPLAPNVVIWGSLMAACQIHGENELGEFAAKQVLELEPDHDGALVQLSNIYAKDR 297


>ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Glycine max]
          Length = 721

 Score =  192 bits (489), Expect = 2e-47
 Identities = 90/119 (75%), Positives = 103/119 (86%)
 Frame = +2

Query: 5   PNWVTFVGVLCACSHAGLVEEGQKAFESMVNEYRITPKAEHYGCMVDLYGRANRLTDALE 184
           PN VTF+GVL ACSHAGLVEEGQK F SM+NE+RI+P+ EHYGCMVDLY RAN L  A+E
Sbjct: 448 PNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRANHLRKAME 507

Query: 185 IVETMPMAPNVVIWGSLMAACRIHGEFELGEFAAKRLLEIDPDHDGAHVFLSNIYAKEK 361
           ++ETMP  PNV+IWGSLM+AC+ HGE ELGEFAA RLLE++PDHDGA V LSNIYAKEK
Sbjct: 508 LIETMPFPPNVIIWGSLMSACQNHGEIELGEFAATRLLELEPDHDGALVVLSNIYAKEK 566


>ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297314084|gb|EFH44507.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 725

 Score =  192 bits (489), Expect = 2e-47
 Identities = 88/118 (74%), Positives = 104/118 (88%)
 Frame = +2

Query: 5   PNWVTFVGVLCACSHAGLVEEGQKAFESMVNEYRITPKAEHYGCMVDLYGRANRLTDALE 184
           PN VTFVGVL  CSH+GLVEEG+K F SM +EY ITPK EHYGCMVDL+GRAN L +ALE
Sbjct: 446 PNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKIEHYGCMVDLFGRANLLREALE 505

Query: 185 IVETMPMAPNVVIWGSLMAACRIHGEFELGEFAAKRLLEIDPDHDGAHVFLSNIYAKE 358
           ++E+MPMAPNVVIWGSLM+ACR+HGE ELGE AAKR+L+++PDHDGA V +SNIYA+E
Sbjct: 506 VIESMPMAPNVVIWGSLMSACRVHGELELGELAAKRILKLEPDHDGALVLMSNIYARE 563


>ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355512069|gb|AES93692.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 726

 Score =  191 bits (486), Expect = 4e-47
 Identities = 89/119 (74%), Positives = 103/119 (86%)
 Frame = +2

Query: 5   PNWVTFVGVLCACSHAGLVEEGQKAFESMVNEYRITPKAEHYGCMVDLYGRANRLTDALE 184
           PN VTF+GVL AC HAGLVEEG+K F SM+NE+ I+P  EHYGCMVDLY RAN L  A+E
Sbjct: 453 PNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRKAIE 512

Query: 185 IVETMPMAPNVVIWGSLMAACRIHGEFELGEFAAKRLLEIDPDHDGAHVFLSNIYAKEK 361
           ++ETMP APNV+IWGSLM+AC++HGE ELGEFAAKRLLE++PDHDGA V LSNIYAKEK
Sbjct: 513 LIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLELEPDHDGALVVLSNIYAKEK 571


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