BLASTX nr result

ID: Scutellaria24_contig00020624 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00020624
         (919 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, puta...   348   1e-93
gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum l...   345   1e-92
ref|XP_002310719.1| predicted protein [Populus trichocarpa] gi|2...   336   5e-90
ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic su...   335   1e-89
emb|CBI21412.3| unnamed protein product [Vitis vinifera]              335   1e-89

>ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, putative [Ricinus communis]
            gi|223537171|gb|EEF38804.1| DNA polymerase alpha
            catalytic subunit, putative [Ricinus communis]
          Length = 1526

 Score =  348 bits (893), Expect = 1e-93
 Identities = 158/240 (65%), Positives = 197/240 (82%), Gaps = 1/240 (0%)
 Frame = -1

Query: 919  ADCLGLDPSKFQSKSSDFVSNDPSSFLSLALDDEERYRGCEPLVLSCPSCSGTFECLPIL 740
            ADCLGLD SKFQ KSS+ ++NDP+S L  A++DEERYR CEPL+LSCPSCSGTFEC  + 
Sbjct: 1287 ADCLGLDSSKFQIKSSEAINNDPASSLLFAVNDEERYRSCEPLLLSCPSCSGTFECPAVF 1346

Query: 739  NSVCTLINTKPENMQAE-STKDFWHKLCCPKCPEEGDGGRISSAILANQVKRQAERFMSI 563
             S+CT I+  P  +Q E S  +FW ++ CPKCPEEGD GRIS A+LANQVKRQAE F+S+
Sbjct: 1347 GSICTSISANPTKLQVEESVSNFWCRMRCPKCPEEGDTGRISPAMLANQVKRQAEGFVSM 1406

Query: 562  YYKGLMMCDDETCNYITRGVNLRALGDSERGTTCPNYPRCNGHLIRKYTESELYRQLTYF 383
            YYKGLM CDDETC +ITR +NLR +GDSERGT CPNYPRCNG L+RKYTE+ELY+QL+++
Sbjct: 1407 YYKGLMTCDDETCKHITRSLNLRLIGDSERGTVCPNYPRCNGRLVRKYTEAELYKQLSFY 1466

Query: 382  CYTLDTVRCIDKVESDKRLLVEKELARIRPLVETAAIMVQKIRDRCAYGWVQLTDFVVIV 203
            CY LDTVRC++K+++  R+ +EK++ +IRP+V+ A   VQKIRDRCAYGWVQL+D  V V
Sbjct: 1467 CYLLDTVRCMEKMDAGTRISLEKKITKIRPMVDLAVSTVQKIRDRCAYGWVQLSDLSVTV 1526


>gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum lycopersicum]
          Length = 1561

 Score =  345 bits (884), Expect = 1e-92
 Identities = 159/238 (66%), Positives = 191/238 (80%), Gaps = 1/238 (0%)
 Frame = -1

Query: 919  ADCLGLDPSKFQSKSSDFVSNDPSSFLSLALDDEERYRGCEPLVLSCPSCSGTFECLPIL 740
            ADCLGLD SKFQ+KSS+ V++DPS+ L    DDEER+RGCEPL L+CPSCS +FEC PI 
Sbjct: 1323 ADCLGLDSSKFQNKSSEAVNDDPSNALLCVADDEERFRGCEPLTLTCPSCSCSFECAPIF 1382

Query: 739  NSVCTLINTKPENMQA-ESTKDFWHKLCCPKCPEEGDGGRISSAILANQVKRQAERFMSI 563
            +S+C+ I   P ++Q  ES    W +  CPKCPEE +G  ISSA++ANQVKRQ E F+S 
Sbjct: 1383 SSICSSIRQNPADLQVGESASKVWERFSCPKCPEESEGN-ISSALIANQVKRQVEGFIST 1441

Query: 562  YYKGLMMCDDETCNYITRGVNLRALGDSERGTTCPNYPRCNGHLIRKYTESELYRQLTYF 383
            YYKG+MMCDDETCNY TR +NLR +GDSERGT CPNYPRCNGHL+R+YTE++LY+QL YF
Sbjct: 1442 YYKGVMMCDDETCNYTTRSLNLRVIGDSERGTVCPNYPRCNGHLLRQYTEADLYKQLAYF 1501

Query: 382  CYTLDTVRCIDKVESDKRLLVEKELARIRPLVETAAIMVQKIRDRCAYGWVQLTDFVV 209
            C+ LDTVRCI+KVES+ RL VEKEL RIRP+VE AA  V+K RDRCAY WVQL D +V
Sbjct: 1502 CFVLDTVRCIEKVESNMRLQVEKELVRIRPVVEAAASTVEKFRDRCAYSWVQLKDLIV 1559


>ref|XP_002310719.1| predicted protein [Populus trichocarpa] gi|222853622|gb|EEE91169.1|
            predicted protein [Populus trichocarpa]
          Length = 1312

 Score =  336 bits (861), Expect = 5e-90
 Identities = 160/242 (66%), Positives = 192/242 (79%), Gaps = 3/242 (1%)
 Frame = -1

Query: 919  ADCLGLDPSKFQSKSSDFVSNDPSSFLSLALDDEERYRGCEPLVLSCPSCSGTFECLPIL 740
            ADCLGLD SKF+SKSS+ V   PSS L  A DDEERY+ CEPL+LSCPSCSGTF C P+ 
Sbjct: 1074 ADCLGLDSSKFRSKSSESV---PSSSLLFAADDEERYQSCEPLILSCPSCSGTFHCPPVF 1130

Query: 739  NSVCTLINTKPENMQAE-STKDFWHKLCCPKCPEEGDGGRISSAILANQVKRQAERFMSI 563
             S+CT I  K +N Q E S  +FWH+LCCPKCPEEGD GRIS A +ANQVKRQAE F+S 
Sbjct: 1131 ISICTSILEKSKNPQIEESISNFWHRLCCPKCPEEGDLGRISPATMANQVKRQAEGFVST 1190

Query: 562  YYKGLMMCDDETCNYITRGVNLRALGDSERGTTCPNYPRCNGHLIRKYTESELYRQLTYF 383
            YYKG+MMCDDETC + TR +NLR +GDSERGT CP+YPRCNG L+RKYTE++LY+QL+YF
Sbjct: 1191 YYKGVMMCDDETCKHTTRSLNLRLVGDSERGTVCPSYPRCNGRLVRKYTEADLYKQLSYF 1250

Query: 382  CYTLDTVRCIDKVESD--KRLLVEKELARIRPLVETAAIMVQKIRDRCAYGWVQLTDFVV 209
            C+ L+T RCI+K+++D   R+ VEKEL +IRP+V+ A   V+KIRDRCAYGWVQL    V
Sbjct: 1251 CHLLETARCIEKLQADAGTRIQVEKELMKIRPMVDMALSTVKKIRDRCAYGWVQLNGLAV 1310

Query: 208  IV 203
             V
Sbjct: 1311 TV 1312


>ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic subunit-like [Vitis
            vinifera]
          Length = 1522

 Score =  335 bits (858), Expect = 1e-89
 Identities = 157/239 (65%), Positives = 188/239 (78%)
 Frame = -1

Query: 919  ADCLGLDPSKFQSKSSDFVSNDPSSFLSLALDDEERYRGCEPLVLSCPSCSGTFECLPIL 740
            ADCLGLD SKFQS+ S+ ++ND S  +SL   DEERYRGCE L+LSCPSC GTF+C  + 
Sbjct: 1286 ADCLGLDSSKFQSRRSEAINNDFS--ISLLSADEERYRGCEHLILSCPSCFGTFDCPTLF 1343

Query: 739  NSVCTLINTKPENMQAESTKDFWHKLCCPKCPEEGDGGRISSAILANQVKRQAERFMSIY 560
            NSV T I  K   +Q E + +FW +L CPKCPEEGD GR+S A++ANQVKRQA+ F+S+Y
Sbjct: 1344 NSVHTSITEKSTQVQVEESNNFWQRLRCPKCPEEGDVGRMSPALIANQVKRQADGFISMY 1403

Query: 559  YKGLMMCDDETCNYITRGVNLRALGDSERGTTCPNYPRCNGHLIRKYTESELYRQLTYFC 380
            YKG MMCDDETC + T  +NLR +GDSERGT CPNYPRCNG L+RKYTE++LY+QL+YFC
Sbjct: 1404 YKGSMMCDDETCKHTTNSLNLRVIGDSERGTVCPNYPRCNGRLVRKYTEADLYKQLSYFC 1463

Query: 379  YTLDTVRCIDKVESDKRLLVEKELARIRPLVETAAIMVQKIRDRCAYGWVQLTDFVVIV 203
            + LDTVRCI+K+E   R+ +EKELARIRPLV  AA   QKIRDRCAYGWVQL D  V V
Sbjct: 1464 HVLDTVRCIEKMEVSTRIPIEKELARIRPLVNLAASTTQKIRDRCAYGWVQLDDLTVTV 1522


>emb|CBI21412.3| unnamed protein product [Vitis vinifera]
          Length = 1561

 Score =  335 bits (858), Expect = 1e-89
 Identities = 157/239 (65%), Positives = 188/239 (78%)
 Frame = -1

Query: 919  ADCLGLDPSKFQSKSSDFVSNDPSSFLSLALDDEERYRGCEPLVLSCPSCSGTFECLPIL 740
            ADCLGLD SKFQS+ S+ ++ND S  +SL   DEERYRGCE L+LSCPSC GTF+C  + 
Sbjct: 1325 ADCLGLDSSKFQSRRSEAINNDFS--ISLLSADEERYRGCEHLILSCPSCFGTFDCPTLF 1382

Query: 739  NSVCTLINTKPENMQAESTKDFWHKLCCPKCPEEGDGGRISSAILANQVKRQAERFMSIY 560
            NSV T I  K   +Q E + +FW +L CPKCPEEGD GR+S A++ANQVKRQA+ F+S+Y
Sbjct: 1383 NSVHTSITEKSTQVQVEESNNFWQRLRCPKCPEEGDVGRMSPALIANQVKRQADGFISMY 1442

Query: 559  YKGLMMCDDETCNYITRGVNLRALGDSERGTTCPNYPRCNGHLIRKYTESELYRQLTYFC 380
            YKG MMCDDETC + T  +NLR +GDSERGT CPNYPRCNG L+RKYTE++LY+QL+YFC
Sbjct: 1443 YKGSMMCDDETCKHTTNSLNLRVIGDSERGTVCPNYPRCNGRLVRKYTEADLYKQLSYFC 1502

Query: 379  YTLDTVRCIDKVESDKRLLVEKELARIRPLVETAAIMVQKIRDRCAYGWVQLTDFVVIV 203
            + LDTVRCI+K+E   R+ +EKELARIRPLV  AA   QKIRDRCAYGWVQL D  V V
Sbjct: 1503 HVLDTVRCIEKMEVSTRIPIEKELARIRPLVNLAASTTQKIRDRCAYGWVQLDDLTVTV 1561


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