BLASTX nr result

ID: Scutellaria24_contig00020486 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00020486
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520950.1| pentatricopeptide repeat-containing protein,...   168   5e-40
ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containi...   166   2e-39
ref|XP_002306801.1| predicted protein [Populus trichocarpa] gi|2...   163   1e-38
emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]   162   2e-38
ref|XP_002876719.1| pentatricopeptide repeat-containing protein ...   160   8e-38

>ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539787|gb|EEF41367.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 835

 Score =  168 bits (425), Expect = 5e-40
 Identities = 75/105 (71%), Positives = 89/105 (84%)
 Frame = +1

Query: 1   KRFFNIMQCQYDLEPWPEHYTCLVDLLGRANRIVEALELIKSMKREPTAAVWCALLGACR 180
           K F  IM+C+Y LEPWPEHYTCLVDLLGR N + EA +++KSM+ EPT  VWCALLGACR
Sbjct: 583 KSFLEIMKCEYQLEPWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVWCALLGACR 642

Query: 181 THSNMEIGEIAARKLLEMEPENPGNYVLISNVFAASERWEDVEEV 315
            HSN EIGE+AA KLLE++ +NPGNYVL+SNVFAA+ RW+DVEEV
Sbjct: 643 IHSNKEIGEVAAEKLLELDLDNPGNYVLVSNVFAANGRWKDVEEV 687


>ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein At3g63370-like
            [Vitis vinifera]
          Length = 993

 Score =  166 bits (420), Expect = 2e-39
 Identities = 74/105 (70%), Positives = 88/105 (83%)
 Frame = +1

Query: 1    KRFFNIMQCQYDLEPWPEHYTCLVDLLGRANRIVEALELIKSMKREPTAAVWCALLGACR 180
            +RF   M+ +Y LEPWPEHY CLVDLLGRAN + EA + +K M+ EPTA VWCALLGAC+
Sbjct: 741  RRFLESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQ 800

Query: 181  THSNMEIGEIAARKLLEMEPENPGNYVLISNVFAASERWEDVEEV 315
             HSN E+GEIAA+KLLEM+PENPGNYVL+SNV+AA  RW+DVEEV
Sbjct: 801  IHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYAAERRWKDVEEV 845


>ref|XP_002306801.1| predicted protein [Populus trichocarpa] gi|222856250|gb|EEE93797.1|
           predicted protein [Populus trichocarpa]
          Length = 787

 Score =  163 bits (413), Expect = 1e-38
 Identities = 73/105 (69%), Positives = 88/105 (83%)
 Frame = +1

Query: 1   KRFFNIMQCQYDLEPWPEHYTCLVDLLGRANRIVEALELIKSMKREPTAAVWCALLGACR 180
           KR    M+C+Y LEPWPEHY CLVDLLGRAN + EA   +KSM+ EPTA VWCA LGACR
Sbjct: 535 KRLLETMKCKYQLEPWPEHYACLVDLLGRANHLEEAYHFVKSMQIEPTAEVWCAFLGACR 594

Query: 181 THSNMEIGEIAARKLLEMEPENPGNYVLISNVFAASERWEDVEEV 315
            HSN ++GEIAA+KLL+++P++PG+YVLISNVFAAS RW+DVEEV
Sbjct: 595 IHSNKKLGEIAAQKLLDLDPDSPGSYVLISNVFAASGRWKDVEEV 639


>emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
          Length = 957

 Score =  162 bits (411), Expect = 2e-38
 Identities = 72/105 (68%), Positives = 87/105 (82%)
 Frame = +1

Query: 1    KRFFNIMQCQYDLEPWPEHYTCLVDLLGRANRIVEALELIKSMKREPTAAVWCALLGACR 180
            +RF   M+ +Y LEPWPEHY CLVDLLGRAN + EA + +K M+ EPTA VWCALLGAC+
Sbjct: 705  RRFLESMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQ 764

Query: 181  THSNMEIGEIAARKLLEMEPENPGNYVLISNVFAASERWEDVEEV 315
             HSN E+GEIAA+KLLEM+PENPGNYVL+SNV++A  RW+DVE V
Sbjct: 765  IHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYSAERRWKDVEXV 809


>ref|XP_002876719.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297322557|gb|EFH52978.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1005

 Score =  160 bits (406), Expect = 8e-38
 Identities = 72/105 (68%), Positives = 85/105 (80%)
 Frame = +1

Query: 1    KRFFNIMQCQYDLEPWPEHYTCLVDLLGRANRIVEALELIKSMKREPTAAVWCALLGACR 180
            +RF  IM+ +Y LEPWPEHY CLVD+LGRAN +VEA E +K MK EPT  VWCALL ACR
Sbjct: 687  RRFLKIMELEYKLEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTTEVWCALLAACR 746

Query: 181  THSNMEIGEIAARKLLEMEPENPGNYVLISNVFAASERWEDVEEV 315
            +HS  EIGEIAA++LLE+EP+NPGN VL+SNVFA   RW DVE+V
Sbjct: 747  SHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKV 791


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