BLASTX nr result

ID: Scutellaria24_contig00020468 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00020468
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273203.2| PREDICTED: E3 ubiquitin-protein ligase UPL4-...   182   3e-44
emb|CBI32615.3| unnamed protein product [Vitis vinifera]              182   3e-44
ref|XP_002525185.1| ubiquitin protein ligase E3a, putative [Rici...   157   8e-37
ref|NP_195908.1| E3 ubiquitin-protein ligase UPL4 [Arabidopsis t...   141   5e-32
ref|XP_002870997.1| ubiquitin-protein ligase 4 [Arabidopsis lyra...   141   6e-32

>ref|XP_002273203.2| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Vitis vinifera]
          Length = 1575

 Score =  182 bits (461), Expect = 3e-44
 Identities = 90/163 (55%), Positives = 124/163 (76%), Gaps = 1/163 (0%)
 Frame = -3

Query: 512  QIMSELNEKDSISTFEFVESGIVKALVDYLSNAMHL-VGIEDYNVANHLCIMEKRFQVFG 336
            QI++ LN K+ ISTFEF+ESGIVK+LV+YLSN +++   +    V++H   +EKRF+VFG
Sbjct: 670  QIITILNGKEPISTFEFIESGIVKSLVNYLSNGLYMREKVGSQGVSSHYDNVEKRFEVFG 729

Query: 335  CLLLSCADPIREEYPLLTLVRRLESALSSVENFPVISSHTSRRRNSYATVPYGRCTSYPC 156
             LLLS ++P+ E+ PL  L+++L+ ALSSVENFPVI SH S++RNS+ATVP GRC S+PC
Sbjct: 730  GLLLSLSEPLSEDLPLSVLIQKLQHALSSVENFPVILSHASKQRNSFATVPNGRCVSHPC 789

Query: 155  LKIRFVREDGEDSLRDYPEEDVHVDPFVPLGEITGYLWTRVCV 27
            LK+RF +E+ E SL DY E+ + VDPF  L  I G+LW +V +
Sbjct: 790  LKVRFTKEEVETSLYDYSEDVLTVDPFSSLDAIEGFLWRKVSI 832


>emb|CBI32615.3| unnamed protein product [Vitis vinifera]
          Length = 1487

 Score =  182 bits (461), Expect = 3e-44
 Identities = 90/163 (55%), Positives = 124/163 (76%), Gaps = 1/163 (0%)
 Frame = -3

Query: 512  QIMSELNEKDSISTFEFVESGIVKALVDYLSNAMHL-VGIEDYNVANHLCIMEKRFQVFG 336
            QI++ LN K+ ISTFEF+ESGIVK+LV+YLSN +++   +    V++H   +EKRF+VFG
Sbjct: 670  QIITILNGKEPISTFEFIESGIVKSLVNYLSNGLYMREKVGSQGVSSHYDNVEKRFEVFG 729

Query: 335  CLLLSCADPIREEYPLLTLVRRLESALSSVENFPVISSHTSRRRNSYATVPYGRCTSYPC 156
             LLLS ++P+ E+ PL  L+++L+ ALSSVENFPVI SH S++RNS+ATVP GRC S+PC
Sbjct: 730  GLLLSLSEPLSEDLPLSVLIQKLQHALSSVENFPVILSHASKQRNSFATVPNGRCVSHPC 789

Query: 155  LKIRFVREDGEDSLRDYPEEDVHVDPFVPLGEITGYLWTRVCV 27
            LK+RF +E+ E SL DY E+ + VDPF  L  I G+LW +V +
Sbjct: 790  LKVRFTKEEVETSLYDYSEDVLTVDPFSSLDAIEGFLWRKVSI 832


>ref|XP_002525185.1| ubiquitin protein ligase E3a, putative [Ricinus communis]
            gi|223535482|gb|EEF37151.1| ubiquitin protein ligase E3a,
            putative [Ricinus communis]
          Length = 1561

 Score =  157 bits (397), Expect = 8e-37
 Identities = 82/171 (47%), Positives = 118/171 (69%), Gaps = 1/171 (0%)
 Frame = -3

Query: 512  QIMSELNEKDSISTFEFVESGIVKALVDYLSNAMHL-VGIEDYNVANHLCIMEKRFQVFG 336
            QIM  LN ++++STFEF+ESGIVK+LV+Y+SN  +L   +E ++   H   +EKRFQVF 
Sbjct: 660  QIMETLNGRETVSTFEFIESGIVKSLVNYISNGQYLREKVELHDRRAHYHAVEKRFQVFA 719

Query: 335  CLLLSCADPIREEYPLLTLVRRLESALSSVENFPVISSHTSRRRNSYATVPYGRCTSYPC 156
             L  S +  +  E P+  LVR+L+SALSS+ENFPVI +H S++RN +ATVP G C S+PC
Sbjct: 720  RLFSSYSS-LAGELPVSVLVRKLQSALSSLENFPVILTHLSKQRNWFATVPNGHCISHPC 778

Query: 155  LKIRFVREDGEDSLRDYPEEDVHVDPFVPLGEITGYLWTRVCVGNIRNSSM 3
            LK+RF+R +GE  L DY ++ + VDPF  L  + G+L  RV +   + + +
Sbjct: 779  LKVRFLRGEGETCLSDYSDDAITVDPFSSLDAVEGFLLPRVRIERTKETEI 829


>ref|NP_195908.1| E3 ubiquitin-protein ligase UPL4 [Arabidopsis thaliana]
            gi|75181166|sp|Q9LYZ7.1|UPL4_ARATH RecName: Full=E3
            ubiquitin-protein ligase UPL4; Short=Ubiquitin-protein
            ligase 4 gi|7413563|emb|CAB86042.1| putative protein
            [Arabidopsis thaliana] gi|332003148|gb|AED90531.1| E3
            ubiquitin-protein ligase UPL4 [Arabidopsis thaliana]
          Length = 1502

 Score =  141 bits (356), Expect = 5e-32
 Identities = 72/161 (44%), Positives = 107/161 (66%), Gaps = 1/161 (0%)
 Frame = -3

Query: 512  QIMSELNEKDSISTFEFVESGIVKALVDYLSNAMHLVGIEDYNV-ANHLCIMEKRFQVFG 336
            QIM  LN ++S+STFEF+ESG+VK+L  YLSN ++   +       + L  + KRF+VF 
Sbjct: 649  QIMERLNGRESVSTFEFIESGVVKSLASYLSNGLYQRKLSKGGPECDSLPFIGKRFEVFT 708

Query: 335  CLLLSCADPIREEYPLLTLVRRLESALSSVENFPVISSHTSRRRNSYATVPYGRCTSYPC 156
             LL S  +          L+++L+++LSS+ENFP++ S   +++NS+A +P GRCTSYPC
Sbjct: 709  RLLWSDGEATSS-----LLIQKLQNSLSSLENFPIVLSQFLKQKNSFAAIPNGRCTSYPC 763

Query: 155  LKIRFVREDGEDSLRDYPEEDVHVDPFVPLGEITGYLWTRV 33
            LK+RF++ +GE SLRDY ++ V VDP   L  +  YLW +V
Sbjct: 764  LKVRFLKAEGETSLRDYSQDFVTVDPLCYLDAVDQYLWPKV 804


>ref|XP_002870997.1| ubiquitin-protein ligase 4 [Arabidopsis lyrata subsp. lyrata]
            gi|297316834|gb|EFH47256.1| ubiquitin-protein ligase 4
            [Arabidopsis lyrata subsp. lyrata]
          Length = 1509

 Score =  141 bits (355), Expect = 6e-32
 Identities = 72/161 (44%), Positives = 108/161 (67%), Gaps = 1/161 (0%)
 Frame = -3

Query: 512  QIMSELNEKDSISTFEFVESGIVKALVDYLSNAMHLVGIEDYNV-ANHLCIMEKRFQVFG 336
            QIM  LN ++S+STFEF ESG+VK+L +YLSN ++   +   +   + L  + KRF+VF 
Sbjct: 650  QIMERLNGRESVSTFEFTESGVVKSLANYLSNGLYQRKLSKGDPECDSLPFVGKRFEVFT 709

Query: 335  CLLLSCADPIREEYPLLTLVRRLESALSSVENFPVISSHTSRRRNSYATVPYGRCTSYPC 156
             LL S  +          L+++L+++LSS+ENFP++ S   +++NS+A +P GRCTSYPC
Sbjct: 710  RLLWSDGEATSS-----LLIQKLQNSLSSLENFPIVLSQFLKQKNSFAAIPNGRCTSYPC 764

Query: 155  LKIRFVREDGEDSLRDYPEEDVHVDPFVPLGEITGYLWTRV 33
            LK+RF++ +GE SLRDY ++ V VDP   L  +  YLW +V
Sbjct: 765  LKVRFLKAEGETSLRDYSQDFVTVDPLCYLDAVDQYLWPKV 805


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