BLASTX nr result
ID: Scutellaria24_contig00020443
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria24_contig00020443
(1078 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002533695.1| Ran GTPase binding protein, putative [Ricinu... 152 1e-34
ref|XP_004166562.1| PREDICTED: probable E3 ubiquitin-protein lig... 151 2e-34
ref|XP_004142058.1| PREDICTED: probable E3 ubiquitin-protein lig... 151 2e-34
ref|XP_002316264.1| predicted protein [Populus trichocarpa] gi|2... 150 5e-34
ref|XP_003530222.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ... 145 2e-32
>ref|XP_002533695.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223526406|gb|EEF28690.1| Ran GTPase binding protein,
putative [Ricinus communis]
Length = 478
Score = 152 bits (385), Expect = 1e-34
Identities = 72/119 (60%), Positives = 88/119 (73%), Gaps = 1/119 (0%)
Frame = +2
Query: 92 SRIKMVASPHLIPCIDXXXXXXXXA-VNNQDGLAVAADQCRSMGNYIKEIACGGRHSVVV 268
SRIKMV+SPHLIPCID + + +Q L +A G+Y+KEIACGGRHS +V
Sbjct: 259 SRIKMVSSPHLIPCIDASASGKDRSLIVHQGNLTPSAQASTFPGSYVKEIACGGRHSAIV 318
Query: 269 TDTGVLLAFGWGLYGQCGQGNTDDLLRPACVPSLLDTQIEAVAAGLWHTLCICADGGVH 445
TDTG LL FGWGLYGQCGQG T+D LRPACVP+L ++ ++AAGLWHT+CI ADG V+
Sbjct: 319 TDTGALLTFGWGLYGQCGQGTTNDQLRPACVPALSGIKVISIAAGLWHTVCISADGHVY 377
Score = 127 bits (319), Expect = 5e-27
Identities = 53/85 (62%), Positives = 69/85 (81%)
Frame = +1
Query: 640 QNVPRLLDSSFLENKKAKLASSGARHSAILTEDGKIFSWGWNKYGQLGVGDTVDRNTPAE 819
Q P+ L + L +K AK+ S GARHSA+LTEDG+++SWGWNKYGQLG+GD++DRN P++
Sbjct: 393 QTEPKQLYAPSLGSKHAKIVSCGARHSAVLTEDGQVYSWGWNKYGQLGLGDSIDRNIPSQ 452
Query: 820 VPLDDYTTKNIACGWWHTLLLCEAV 894
VP++ Y KNIACGWWHTLLL E +
Sbjct: 453 VPIEGYRPKNIACGWWHTLLLAETI 477
Score = 57.8 bits (138), Expect = 5e-06
Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +1
Query: 643 NVPRLLDSSFLENKKAKLASSGARHSAILTEDGKIFSWGWNKYGQLGVGDTVDRNTPAEV 822
N+ +S K + G RHSAI+T+ G + ++GW YGQ G G T D+ PA V
Sbjct: 290 NLTPSAQASTFPGSYVKEIACGGRHSAIVTDTGALLTFGWGLYGQCGQGTTNDQLRPACV 349
Query: 823 P-LDDYTTKNIACGWWHTLLL 882
P L +IA G WHT+ +
Sbjct: 350 PALSGIKVISIAAGLWHTVCI 370
>ref|XP_004166562.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
sativus]
Length = 472
Score = 151 bits (382), Expect = 2e-34
Identities = 71/118 (60%), Positives = 88/118 (74%)
Frame = +2
Query: 92 SRIKMVASPHLIPCIDXXXXXXXXAVNNQDGLAVAADQCRSMGNYIKEIACGGRHSVVVT 271
+R+KMV+SPH+IPCI+ + AA + +GNY+K IACGGRHSVVVT
Sbjct: 252 TRVKMVSSPHIIPCIELPASAKDRSSVIYQASKAAAGKV--LGNYVKGIACGGRHSVVVT 309
Query: 272 DTGVLLAFGWGLYGQCGQGNTDDLLRPACVPSLLDTQIEAVAAGLWHTLCICADGGVH 445
DTG LL FGWGLYGQCGQGNT+DLLRP CV SL TQ+E+++AGLWHT+CI A+G V+
Sbjct: 310 DTGALLTFGWGLYGQCGQGNTNDLLRPTCVSSLSSTQVESISAGLWHTVCITAEGLVY 367
Score = 129 bits (325), Expect = 1e-27
Identities = 54/88 (61%), Positives = 70/88 (79%)
Frame = +1
Query: 640 QNVPRLLDSSFLENKKAKLASSGARHSAILTEDGKIFSWGWNKYGQLGVGDTVDRNTPAE 819
+ +PRLLD+ LE K AK S GARH+ +LT+DG++FSWGWNKYGQLG+GD++DRN P++
Sbjct: 385 ETIPRLLDAPILEGKCAKRVSCGARHNVVLTDDGQLFSWGWNKYGQLGLGDSIDRNIPSK 444
Query: 820 VPLDDYTTKNIACGWWHTLLLCEAVPSK 903
V +D +NI CGWWHTL+L EA PSK
Sbjct: 445 VSIDGCLPRNIVCGWWHTLMLAEAEPSK 472
>ref|XP_004142058.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
sativus]
Length = 485
Score = 151 bits (382), Expect = 2e-34
Identities = 71/118 (60%), Positives = 88/118 (74%)
Frame = +2
Query: 92 SRIKMVASPHLIPCIDXXXXXXXXAVNNQDGLAVAADQCRSMGNYIKEIACGGRHSVVVT 271
+R+KMV+SPH+IPCI+ + AA + +GNY+K IACGGRHSVVVT
Sbjct: 265 TRVKMVSSPHIIPCIELPASAKDRSSVIYQASKAAAGKV--LGNYVKGIACGGRHSVVVT 322
Query: 272 DTGVLLAFGWGLYGQCGQGNTDDLLRPACVPSLLDTQIEAVAAGLWHTLCICADGGVH 445
DTG LL FGWGLYGQCGQGNT+DLLRP CV SL TQ+E+++AGLWHT+CI A+G V+
Sbjct: 323 DTGALLTFGWGLYGQCGQGNTNDLLRPTCVSSLSSTQVESISAGLWHTVCITAEGLVY 380
Score = 129 bits (325), Expect = 1e-27
Identities = 54/88 (61%), Positives = 70/88 (79%)
Frame = +1
Query: 640 QNVPRLLDSSFLENKKAKLASSGARHSAILTEDGKIFSWGWNKYGQLGVGDTVDRNTPAE 819
+ +PRLLD+ LE K AK S GARH+ +LT+DG++FSWGWNKYGQLG+GD++DRN P++
Sbjct: 398 ETIPRLLDAPILEGKCAKRVSCGARHNVVLTDDGQLFSWGWNKYGQLGLGDSIDRNIPSK 457
Query: 820 VPLDDYTTKNIACGWWHTLLLCEAVPSK 903
V +D +NI CGWWHTL+L EA PSK
Sbjct: 458 VSIDGCLPRNIVCGWWHTLMLAEAEPSK 485
>ref|XP_002316264.1| predicted protein [Populus trichocarpa] gi|222865304|gb|EEF02435.1|
predicted protein [Populus trichocarpa]
Length = 164
Score = 150 bits (379), Expect = 5e-34
Identities = 70/118 (59%), Positives = 84/118 (71%)
Frame = +2
Query: 92 SRIKMVASPHLIPCIDXXXXXXXXAVNNQDGLAVAADQCRSMGNYIKEIACGGRHSVVVT 271
SRI+MV+SPH IPCID V ++ G+ R G+++K IACGGRHS V+T
Sbjct: 29 SRIRMVSSPHPIPCIDSAYGKDRAVVLSRGGMTSEGQSFRVPGSHVKGIACGGRHSAVIT 88
Query: 272 DTGVLLAFGWGLYGQCGQGNTDDLLRPACVPSLLDTQIEAVAAGLWHTLCICADGGVH 445
D G LL FGWGLYGQCGQG+TDD L P CV SLL +IEAVAAGLWHT+C+ ADG V+
Sbjct: 89 DAGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEAVAAGLWHTVCVSADGDVY 146
>ref|XP_003530222.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC3-like [Glycine max]
Length = 528
Score = 145 bits (366), Expect = 2e-32
Identities = 67/118 (56%), Positives = 82/118 (69%)
Frame = +2
Query: 92 SRIKMVASPHLIPCIDXXXXXXXXAVNNQDGLAVAADQCRSMGNYIKEIACGGRHSVVVT 271
SR+KMV+SPHLIPCI+ A + G A G+Y+ +IACGGRHSVV+T
Sbjct: 310 SRVKMVSSPHLIPCIESSGKDKSSAFHQGSG--AGAQGSNVTGSYVMDIACGGRHSVVIT 367
Query: 272 DTGVLLAFGWGLYGQCGQGNTDDLLRPACVPSLLDTQIEAVAAGLWHTLCICADGGVH 445
D G LL FGWGLYGQCGQGN D LRP VPSLL T++E +AAGLWHTLC+ +G ++
Sbjct: 368 DAGALLTFGWGLYGQCGQGNNADQLRPTLVPSLLGTRVEKIAAGLWHTLCVSVNGQIY 425
Score = 116 bits (291), Expect = 8e-24
Identities = 48/83 (57%), Positives = 64/83 (77%)
Frame = +1
Query: 634 EKQNVPRLLDSSFLENKKAKLASSGARHSAILTEDGKIFSWGWNKYGQLGVGDTVDRNTP 813
+ + PR LD+S ENK + + S GARHSA+LT+DG +F+WGWNKYGQLG+GD+VDRN P
Sbjct: 441 QPETSPRQLDASRFENKHSSIVSCGARHSALLTDDGHLFTWGWNKYGQLGLGDSVDRNIP 500
Query: 814 AEVPLDDYTTKNIACGWWHTLLL 882
+V + +N+ACGWWHTLL+
Sbjct: 501 GQVSIAGCRPRNVACGWWHTLLM 523