BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00020404
         (532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635274.1| PREDICTED: uncharacterized protein LOC100854...   138   6e-31
ref|XP_002519028.1| RNA polymerase-associated protein RTF1, puta...   131   5e-29
ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein...   128   5e-28
ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein...   125   5e-27
ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein...   122   4e-26

>ref|XP_003635274.1| PREDICTED: uncharacterized protein LOC100854406 [Vitis vinifera]
          Length = 493

 Score =  138 bits (347), Expect = 6e-31
 Identities = 80/152 (52%), Positives = 100/152 (65%), Gaps = 3/152 (1%)
 Frame = -2

Query: 447 MADLEKLLLEAAGRTSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAYSNRKPS 268
           MADLE LLLEAAGRT T                                  R YS+RKPS
Sbjct: 1   MADLENLLLEAAGRTGTAGRNRHSLPPSRRRREGSYSDDGSDSKDDDSDEDRGYSSRKPS 60

Query: 267 GSQVPLKKRLDPADRDDDRSS-QEGDEE-YDREHDSDNDS-VGSDLYKDEDDREKLSRLT 97
           GSQVPLKKRLDP +RDDD  S +EGD++  D E DS +DS VGSDLYK+EDDR++L++LT
Sbjct: 61  GSQVPLKKRLDPTERDDDHGSPEEGDDDGSDHEGDSSDDSDVGSDLYKNEDDRQQLAQLT 120

Query: 96  ELEREMILEARATKRSDRDLTEKLKKRKGQDR 1
           ELEREMIL  RATK++D+ L EKL+ ++G+++
Sbjct: 121 ELEREMILTDRATKKTDKKLHEKLRSKRGKEK 152


>ref|XP_002519028.1| RNA polymerase-associated protein RTF1, putative [Ricinus communis]
           gi|223541691|gb|EEF43239.1| RNA polymerase-associated
           protein RTF1, putative [Ricinus communis]
          Length = 660

 Score =  131 bits (330), Expect = 5e-29
 Identities = 77/154 (50%), Positives = 95/154 (61%), Gaps = 5/154 (3%)
 Frame = -2

Query: 447 MADLEKLLLEAAGRTSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAYSNRKPS 268
           MADLE LLLEAAGRT T                                  R YS+RKPS
Sbjct: 1   MADLENLLLEAAGRTGTSGRNRNALPPSRRRREGSYSDGGSDSRDDDSDDDRGYSSRKPS 60

Query: 267 GSQVPLKKRLDPADRDDDRSSQ-EGDEE---YDREHDS-DNDSVGSDLYKDEDDREKLSR 103
           GSQVPLKKRLDP +RDDD+ SQ EGD +    DRE DS D   VG DLYK+EDDR KL++
Sbjct: 61  GSQVPLKKRLDPTERDDDQGSQDEGDYDDGNSDREGDSSDGSDVGEDLYKNEDDRRKLAQ 120

Query: 102 LTELEREMILEARATKRSDRDLTEKLKKRKGQDR 1
           ++ELEREMIL  RA K+ D++LTE+++ ++  +R
Sbjct: 121 MSELEREMILSERADKKGDKNLTERIRSKRESER 154


>ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Glycine
           max]
          Length = 656

 Score =  128 bits (322), Expect = 5e-28
 Identities = 75/153 (49%), Positives = 91/153 (59%), Gaps = 6/153 (3%)
 Frame = -2

Query: 447 MADLEKLLLEAAGRTSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAYSNRKPS 268
           MADLE LLLEAAGRT T                                    Y++RKPS
Sbjct: 1   MADLENLLLEAAGRTGTAGRNRHSLPPSRRRHDGAYSDGGSDSRDDDSDDELNYASRKPS 60

Query: 267 GSQVPLKKRLDPADRDDDRSSQE-GDEEYDREHD---SDNDSVGSDLYKDEDDREKLSRL 100
           GSQVPLKKRLDP +RDDD  SQE  D++   +HD   SD  ++G DLYKDEDDR KLS +
Sbjct: 61  GSQVPLKKRLDPTERDDDLGSQEEADDDGRSDHDGDSSDESNIGDDLYKDEDDRRKLSEM 120

Query: 99  TELEREMILEARATKRSDRDLTEKL--KKRKGQ 7
           TEL+REMIL  RATK+ D++L  K+  K+ KG+
Sbjct: 121 TELQREMILSDRATKKDDKNLLGKIASKREKGK 153


>ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Glycine
           max]
          Length = 656

 Score =  125 bits (313), Expect = 5e-27
 Identities = 73/153 (47%), Positives = 88/153 (57%), Gaps = 6/153 (3%)
 Frame = -2

Query: 447 MADLEKLLLEAAGRTSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAYSNRKPS 268
           MADLE LLLEAAGRT T                                    Y++RKPS
Sbjct: 1   MADLENLLLEAAGRTGTAGRNRHSLPSSRRRHDGAYSDGGSDSRDEDSDDELNYASRKPS 60

Query: 267 GSQVPLKKRLDPADRDDDRSSQEGDEEYDREH----DSDNDSVGSDLYKDEDDREKLSRL 100
           GSQVPLKKRLDP +RDDD  SQE  ++  R       SD  ++G DLYKDEDDR KLS +
Sbjct: 61  GSQVPLKKRLDPTERDDDLGSQEEADDDGRSDCDGDSSDESNIGDDLYKDEDDRRKLSEM 120

Query: 99  TELEREMILEARATKRSDRDLTEKL--KKRKGQ 7
           TEL+REMIL  RATK+ D++L  K+  K+ KG+
Sbjct: 121 TELQREMILSDRATKKDDKNLLGKIASKREKGK 153


>ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis
           sativus] gi|449517636|ref|XP_004165851.1| PREDICTED: RNA
           polymerase-associated protein RTF1 homolog [Cucumis
           sativus]
          Length = 660

 Score =  122 bits (305), Expect = 4e-26
 Identities = 72/149 (48%), Positives = 90/149 (60%), Gaps = 5/149 (3%)
 Frame = -2

Query: 447 MADLEKLLLEAAGRTSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAYSNRKPS 268
           MADLE LLLEAAGRT+                                   R Y++RKPS
Sbjct: 1   MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60

Query: 267 GSQVPLKKRLDPADRDDDRSSQEGDEEYD----REHDSDNDS-VGSDLYKDEDDREKLSR 103
           GSQVPLKKRLDP +RDDD  SQE  E+ D    RE DS ++S VG DLYKD+DDR KL+ 
Sbjct: 61  GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120

Query: 102 LTELEREMILEARATKRSDRDLTEKLKKR 16
           ++EL+REMIL  RA+K++D+ L E L+ +
Sbjct: 121 MSELQREMILSDRASKKNDKHLYESLRAK 149