BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00020367
         (962 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267303.1| PREDICTED: pentatricopeptide repeat-containi...   447   e-123
ref|XP_002522543.1| pentatricopeptide repeat-containing protein,...   434   e-119
ref|XP_003541711.1| PREDICTED: pentatricopeptide repeat-containi...   429   e-118
ref|XP_002305756.1| predicted protein [Populus trichocarpa] gi|2...   424   e-116
ref|XP_003593731.1| Pentatricopeptide repeat-containing protein ...   420   e-115

>ref|XP_002267303.1| PREDICTED: pentatricopeptide repeat-containing protein At1g28690,
            mitochondrial [Vitis vinifera]
          Length = 533

 Score =  447 bits (1150), Expect = e-123
 Identities = 212/292 (72%), Positives = 253/292 (86%)
 Frame = -3

Query: 960  TFEKDVVVYNAMIEGYSKSVEMAKKAIEIYIDMQRLGFRPTISTFASIIGACSLISAFEI 781
            T EKDVVV+NAMIEGYSKSVE A++++E+YIDMQRL FRPT+STFAS+IGACS+++ FEI
Sbjct: 241  TVEKDVVVFNAMIEGYSKSVETARRSLEVYIDMQRLNFRPTMSTFASVIGACSVLTVFEI 300

Query: 780  GQQVQGQVIKTESFTDIQIGSALIDMYSKCGRTEDARCIFDHMPKRNVFSWTSMIDGYGK 601
            GQQVQ Q++K   + DI++GSALIDMYSKCGR EDAR +FDHMP++NVFSWTSMIDGYGK
Sbjct: 301  GQQVQSQLVKMNFYNDIKMGSALIDMYSKCGRIEDARRVFDHMPEKNVFSWTSMIDGYGK 360

Query: 600  NGNPNESFALFDRMISESQIVPNYVTFLSALSACAHAGLVSKGREIFESMERVYSMKPRM 421
            NGN NE+  LF RM  E  + PNYVTFLSALSAC HAGLV+KG  I ESMER Y +KPRM
Sbjct: 361  NGNSNEALELFSRMQIECHVKPNYVTFLSALSACGHAGLVAKGWTILESMERDYLLKPRM 420

Query: 420  EHYACMVDLLGRAGSLNQAFEFVMHMPEKPNSDVWAALLSSCRLHADVELAKIAANELFK 241
            EHYACMVDLLGRAGSL QA+EFVM MPEKP SDVWAALLSSC+LH DVE+A +AA+E+FK
Sbjct: 421  EHYACMVDLLGRAGSLQQAWEFVMRMPEKPGSDVWAALLSSCQLHGDVEMASMAAHEIFK 480

Query: 240  VDTKSRPGAYIALSNTLADAGRWDSVSQLREQMKARGIAKGTGFTWVGTDAG 85
            +++  RPGAY+ALSN LA AG+WDSVS++R+ MK RG++K TG +WVGTD+G
Sbjct: 481  LNSDGRPGAYVALSNALAAAGKWDSVSEVRQLMKVRGVSKDTGCSWVGTDSG 532



 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 66/257 (25%), Positives = 109/257 (42%), Gaps = 46/257 (17%)
 Frame = -3

Query: 936 YNAMIEGYSKSVEMAKKAIEIYIDMQRLGF---RPTISTFASIIGACSLISA------FE 784
           YN MI GY K  ++     E+   + RL F   +P   TF+ I+ A    S       + 
Sbjct: 111 YNYMISGYLKHGQIE----ELLNLVSRLTFSYEKPDGFTFSMILKATGCASGGIFPLTYS 166

Query: 783 IGQQVQGQVIKTESFTDIQIGSALIDMYSKCGRTEDARCIFDHMPKRNVFSWTSMIDGYG 604
           +G+ V  Q++++   +D  + +AL+D Y K G+   AR +FD M  +NV   TSMI GY 
Sbjct: 167 LGKVVHAQILRSNVESDDVLYTALVDSYVKNGKVGYARRVFDMMLDKNVLCSTSMISGYM 226

Query: 603 KNGNPNESFALFDRMISESQIV-------------------------------PNYVTFL 517
             G+  ++  +F R + +  +V                               P   TF 
Sbjct: 227 SQGSVEDAEDIFKRTVEKDVVVFNAMIEGYSKSVETARRSLEVYIDMQRLNFRPTMSTFA 286

Query: 516 SALSACAHAGLVSKGREIFESMERVYSMKPRMEHY------ACMVDLLGRAGSLNQAFEF 355
           S + AC+          +FE  ++V S   +M  Y      + ++D+  + G +  A   
Sbjct: 287 SVIGACSVL-------TVFEIGQQVQSQLVKMNFYNDIKMGSALIDMYSKCGRIEDARRV 339

Query: 354 VMHMPEKPNSDVWAALL 304
             HMPEK N   W +++
Sbjct: 340 FDHMPEK-NVFSWTSMI 355


>ref|XP_002522543.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223538234|gb|EEF39843.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 530

 Score =  434 bits (1116), Expect = e-119
 Identities = 209/293 (71%), Positives = 253/293 (86%)
 Frame = -3

Query: 960  TFEKDVVVYNAMIEGYSKSVEMAKKAIEIYIDMQRLGFRPTISTFASIIGACSLISAFEI 781
            T EKDVVV+NAMIEGYSKSV+ A+KA+E+Y++MQR GFRP +STFAS+IGACS+++ FEI
Sbjct: 239  TVEKDVVVFNAMIEGYSKSVQTAEKALEVYVEMQRYGFRPNLSTFASVIGACSVLAGFEI 298

Query: 780  GQQVQGQVIKTESFTDIQIGSALIDMYSKCGRTEDARCIFDHMPKRNVFSWTSMIDGYGK 601
            GQQVQGQ++K E FT+++ GSALIDMYSKCGR EDAR  F+ MP++NVFSW+SMIDGYGK
Sbjct: 299  GQQVQGQLLKREFFTNVKTGSALIDMYSKCGRIEDARRAFEQMPEKNVFSWSSMIDGYGK 358

Query: 600  NGNPNESFALFDRMISESQIVPNYVTFLSALSACAHAGLVSKGREIFESMERVYSMKPRM 421
            NG P+E+  LF +M  +  I PNYVTFL ALSAC HAGLVSKGREIFESMER YS+KP M
Sbjct: 359  NGRPDEALQLFHKM-QDCCIEPNYVTFLGALSACGHAGLVSKGREIFESMEREYSLKPGM 417

Query: 420  EHYACMVDLLGRAGSLNQAFEFVMHMPEKPNSDVWAALLSSCRLHADVELAKIAANELFK 241
            EHYACMVDLLGRAGSLN A+EFVM MPEKP+SDVWAALLS+C LH +VE+A +AANELFK
Sbjct: 418  EHYACMVDLLGRAGSLNLAWEFVMGMPEKPSSDVWAALLSACNLHGNVEMASVAANELFK 477

Query: 240  VDTKSRPGAYIALSNTLADAGRWDSVSQLREQMKARGIAKGTGFTWVGTDAGL 82
            ++ + R GAY+ALSNTLA AG+WD V+++RE MK+RGI K TG +WVGT++ L
Sbjct: 478  LNAEGRSGAYVALSNTLAAAGKWDGVTEVREIMKSRGILKDTGSSWVGTESVL 530



 Score = 78.2 bits (191), Expect = 3e-12
 Identities = 69/312 (22%), Positives = 132/312 (42%), Gaps = 14/312 (4%)
 Frame = -3

Query: 954 EKDVVVYNAMIEGYSKSVEMAKKAIEIYIDMQRLGFRPTISTFASIIGACS----LISAF 787
           ++ +  YN +I GY K + + + ++ +   +   G RP   T++ I+ A +    +  + 
Sbjct: 105 QRTLSAYNYLIGGYLK-LGLVQDSMNLVRRLVLEGQRPDGFTYSMILKASTSGDNVTLSC 163

Query: 786 EIGQQVQGQVIKTESFTDIQIGSALIDMYSKCGRTEDARCIFDHMPKRNVFSWTSMIDGY 607
            +G  V GQ++K+E   D  + +AL+D Y K GR   AR +FD M ++NV   TSMI GY
Sbjct: 164 NLGSVVHGQILKSEVEPDDVLYTALVDSYVKSGRVGYARKVFDMMMEKNVICSTSMISGY 223

Query: 606 GKNGNPNESFALFDRMISESQIVPNYVTFLSALSACAHAGLVSKGREIFESMERVYSMKP 427
              G+  ++  +F+R + +  +V N               ++    +  ++ E+   +  
Sbjct: 224 MNRGSVEDAEEIFERTVEKDVVVFN--------------AMIEGYSKSVQTAEKALEVYV 269

Query: 426 RMEHYACMVDLLGRAGSLNQAFEFVMHMPEKPNSDVWAALLSSCRLHADVELAKIAANEL 247
            M+ Y                         +PN   +A+++ +C + A  E+ +    +L
Sbjct: 270 EMQRYGF-----------------------RPNLSTFASVIGACSVLAGFEIGQQVQGQL 306

Query: 246 FKVDTKSRPGAYIALSNTLADAGRWDSVSQLREQMKARGIAKGTGFTWVG---------- 97
            K +  +      AL +  +  GR +   +  EQM  + +     F+W            
Sbjct: 307 LKREFFTNVKTGSALIDMYSKCGRIEDARRAFEQMPEKNV-----FSWSSMIDGYGKNGR 361

Query: 96  TDAGLEAFHAGQ 61
            D  L+ FH  Q
Sbjct: 362 PDEALQLFHKMQ 373


>ref|XP_003541711.1| PREDICTED: pentatricopeptide repeat-containing protein At1g28690,
            mitochondrial-like [Glycine max]
          Length = 525

 Score =  429 bits (1102), Expect = e-118
 Identities = 206/291 (70%), Positives = 249/291 (85%)
 Frame = -3

Query: 960  TFEKDVVVYNAMIEGYSKSVEMAKKAIEIYIDMQRLGFRPTISTFASIIGACSLISAFEI 781
            T +KDVV +NAMIEGYSK+ E A +++E+YIDMQRL FRP +STFAS+IGACS+++AFEI
Sbjct: 233  TMDKDVVAFNAMIEGYSKTSEYAMRSLEVYIDMQRLNFRPNVSTFASVIGACSMLAAFEI 292

Query: 780  GQQVQGQVIKTESFTDIQIGSALIDMYSKCGRTEDARCIFDHMPKRNVFSWTSMIDGYGK 601
            GQQVQ Q++KT  + DI++GSALIDMY+KCGR  DAR +FD M K+NVFSWTSMIDGYGK
Sbjct: 293  GQQVQSQLMKTPFYADIKLGSALIDMYAKCGRVVDARRVFDCMLKKNVFSWTSMIDGYGK 352

Query: 600  NGNPNESFALFDRMISESQIVPNYVTFLSALSACAHAGLVSKGREIFESMERVYSMKPRM 421
            NG P+E+  LF ++ +E  IVPNYVTFLSALSACAHAGLV KG EIF+SME  Y +KP M
Sbjct: 353  NGFPDEALQLFGKIQTEYGIVPNYVTFLSALSACAHAGLVDKGWEIFQSMENEYLVKPGM 412

Query: 420  EHYACMVDLLGRAGSLNQAFEFVMHMPEKPNSDVWAALLSSCRLHADVELAKIAANELFK 241
            EHYACMVDLLGRAG LNQA+EFVM MPE+PN DVWAALLSSCRLH ++E+AK+AANELFK
Sbjct: 413  EHYACMVDLLGRAGMLNQAWEFVMRMPERPNLDVWAALLSSCRLHGNLEMAKLAANELFK 472

Query: 240  VDTKSRPGAYIALSNTLADAGRWDSVSQLREQMKARGIAKGTGFTWVGTDA 88
            ++   RPGAY+ALSNTLA AG+W+SV++LRE MK RGI+K TG +WVG D+
Sbjct: 473  LNATGRPGAYVALSNTLAAAGKWESVTELREIMKERGISKDTGRSWVGADS 523



 Score = 70.5 bits (171), Expect = 6e-10
 Identities = 53/203 (26%), Positives = 104/203 (51%), Gaps = 4/203 (1%)
 Frame = -3

Query: 954 EKDVVVYNAMIEGYSKSVEMAKKAIEIYIDMQRLGFRPTISTFASIIGA----CSLISAF 787
           ++ +  YN MI GY K  +  ++++ +   +   G +P   TF+ I+ A    C++    
Sbjct: 99  DRTLSAYNYMISGYLKQ-DQVEESLGLVHRLLVSGEKPDGFTFSMILKASTSGCNVALLG 157

Query: 786 EIGQQVQGQVIKTESFTDIQIGSALIDMYSKCGRTEDARCIFDHMPKRNVFSWTSMIDGY 607
           ++G+ V  Q++K++   D  + +ALID Y K GR   AR +FD M ++NV   TS+I GY
Sbjct: 158 DLGRMVHTQILKSDIERDEVLCTALIDSYVKNGRVAYARTVFDVMSEKNVVCSTSLISGY 217

Query: 606 GKNGNPNESFALFDRMISESQIVPNYVTFLSALSACAHAGLVSKGREIFESMERVYSMKP 427
              G+  ++  +F + + +  +  N    +   S  +   +  +  E++  M+R+ + +P
Sbjct: 218 MNQGSIEDAECIFLKTMDKDVVAFN--AMIEGYSKTSEYAM--RSLEVYIDMQRL-NFRP 272

Query: 426 RMEHYACMVDLLGRAGSLNQAFE 358
            +  +A ++     A S+  AFE
Sbjct: 273 NVSTFASVIG----ACSMLAAFE 291


>ref|XP_002305756.1| predicted protein [Populus trichocarpa] gi|222848720|gb|EEE86267.1|
            predicted protein [Populus trichocarpa]
          Length = 530

 Score =  424 bits (1089), Expect = e-116
 Identities = 207/293 (70%), Positives = 244/293 (83%)
 Frame = -3

Query: 960  TFEKDVVVYNAMIEGYSKSVEMAKKAIEIYIDMQRLGFRPTISTFASIIGACSLISAFEI 781
            T EKD+VV+NAMIEGYSKSVE A KA+E+Y+DMQR G RP  STFAS+ GACS+++ FEI
Sbjct: 239  TVEKDIVVFNAMIEGYSKSVETAMKALEVYVDMQRFGLRPNGSTFASVSGACSVLAGFEI 298

Query: 780  GQQVQGQVIKTESFTDIQIGSALIDMYSKCGRTEDARCIFDHMPKRNVFSWTSMIDGYGK 601
            GQQVQ Q++K+  F  +++GSALIDMYSKCGR EDAR +F++MP RNVFSWTSMIDGYGK
Sbjct: 299  GQQVQCQLMKSGFFNGVKMGSALIDMYSKCGRIEDARRVFNYMPVRNVFSWTSMIDGYGK 358

Query: 600  NGNPNESFALFDRMISESQIVPNYVTFLSALSACAHAGLVSKGREIFESMERVYSMKPRM 421
            NG P E+  LF RM  +  I PNYVTFL ALSAC HAGLV+KGREIF+SMER YS KPRM
Sbjct: 359  NGEPWEALELFHRM-QQCNIEPNYVTFLGALSACGHAGLVTKGREIFDSMERDYSTKPRM 417

Query: 420  EHYACMVDLLGRAGSLNQAFEFVMHMPEKPNSDVWAALLSSCRLHADVELAKIAANELFK 241
            EHYACMVDLLGRAG+L QA+E V  MPEKPNSDVWAALLSSC +H +VE+A++AAN+LFK
Sbjct: 418  EHYACMVDLLGRAGNLQQAWELVKGMPEKPNSDVWAALLSSCNMHGNVEMARVAANKLFK 477

Query: 240  VDTKSRPGAYIALSNTLADAGRWDSVSQLREQMKARGIAKGTGFTWVGTDAGL 82
            ++   RPGAY+ALSNTLA A RWDSVS+LRE MK RGI+K T  +WVGT+  L
Sbjct: 478  INAIGRPGAYVALSNTLAAAERWDSVSELREMMKLRGISKDTACSWVGTEVDL 530



 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 49/186 (26%), Positives = 90/186 (48%), Gaps = 4/186 (2%)
 Frame = -3

Query: 954 EKDVVVYNAMIEGYSKSVEMAKKAIEIYIDMQRLGFRPTISTFASIIGA----CSLISAF 787
           ++ +  YN MI GY +   + +++I +   +   G RP   TF+ I+ A     +++   
Sbjct: 105 QRTLSAYNYMIGGYLRQ-GLFEESISMVRRLDLDGERPDGFTFSMILKASTSGANVMLPR 163

Query: 786 EIGQQVQGQVIKTESFTDIQIGSALIDMYSKCGRTEDARCIFDHMPKRNVFSWTSMIDGY 607
             G  V  Q++K +   D  + +AL+D Y K G+   AR +FD M ++NV   TSMI GY
Sbjct: 164 NTGGLVHAQILKLDVKADDVLYTALVDSYVKSGKVGYARKVFDLMLEKNVICSTSMISGY 223

Query: 606 GKNGNPNESFALFDRMISESQIVPNYVTFLSALSACAHAGLVSKGREIFESMERVYSMKP 427
              G   ++  +F + + +  +V N    +   S      +  K  E++  M+R + ++P
Sbjct: 224 MNQGFVEDAEEIFWKTVEKDIVVFN--AMIEGYSKSVETAM--KALEVYVDMQR-FGLRP 278

Query: 426 RMEHYA 409
               +A
Sbjct: 279 NGSTFA 284


>ref|XP_003593731.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355482779|gb|AES63982.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 520

 Score =  420 bits (1080), Expect = e-115
 Identities = 201/287 (70%), Positives = 244/287 (85%)
 Frame = -3

Query: 960  TFEKDVVVYNAMIEGYSKSVEMAKKAIEIYIDMQRLGFRPTISTFASIIGACSLISAFEI 781
            T +KDVVV+NAMIEGYSK  E A +++E+YIDMQRL FRP +STFASIIGACS+++AFEI
Sbjct: 234  TLDKDVVVFNAMIEGYSKVSEYAMRSLEVYIDMQRLNFRPNLSTFASIIGACSVLAAFEI 293

Query: 780  GQQVQGQVIKTESFTDIQIGSALIDMYSKCGRTEDARCIFDHMPKRNVFSWTSMIDGYGK 601
            G+QVQ Q++KT  F  I++GSALIDMYSKCGR  DA+ +FDHM ++NVFSWTSMIDGYGK
Sbjct: 294  GEQVQAQLMKTPFFAVIKLGSALIDMYSKCGRVIDAQRVFDHMLEKNVFSWTSMIDGYGK 353

Query: 600  NGNPNESFALFDRMISESQIVPNYVTFLSALSACAHAGLVSKGREIFESMERVYSMKPRM 421
            NG P+E+  LF +M  E  I PN+VTFLSAL+ACAHAGLV +G EIF+SME  Y +KPRM
Sbjct: 354  NGFPDEALELFKKMQIEYSITPNFVTFLSALTACAHAGLVERGWEIFQSMESEYKLKPRM 413

Query: 420  EHYACMVDLLGRAGSLNQAFEFVMHMPEKPNSDVWAALLSSCRLHADVELAKIAANELFK 241
            EHYACMVDLLGRAG LNQA+EFV  MPE+PNSDVW ALLSSCR+H ++E+AK+AANELFK
Sbjct: 414  EHYACMVDLLGRAGWLNQAWEFVTRMPERPNSDVWLALLSSCRIHGNIEMAKLAANELFK 473

Query: 240  VDTKSRPGAYIALSNTLADAGRWDSVSQLREQMKARGIAKGTGFTWV 100
            ++   RPGAY+ALSNTLADAG+WD+VS+LRE MK +GI+K T  +WV
Sbjct: 474  LNAYGRPGAYVALSNTLADAGKWDNVSELREVMKEKGISKDTACSWV 520



 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 57/204 (27%), Positives = 106/204 (51%), Gaps = 5/204 (2%)
 Frame = -3

Query: 954 EKDVVVYNAMIEGYSKSVEMAKKAIEIYIDMQRLGFRPTISTFASIIGAC----SLISAF 787
           ++ +  YN MI GY K+ ++  ++++++  +   G +P   TF+ I+ A     S     
Sbjct: 100 DRTLSAYNYMIGGYLKNGQV-DESLDLFHQLSVSGEKPDGFTFSMILKASTNRVSNGMVG 158

Query: 786 EIGQQVQGQVIKTESFTDIQIGSALIDMYSKCGRTEDARCIFDHMPKRNVFSWTSMIDGY 607
           ++G+ V  Q++K +   D  + +ALID Y K GR    R +FD M ++NV S TS+I GY
Sbjct: 159 DLGRMVHAQILKFDVEKDDVLCTALIDSYVKNGRVGYGRTVFDVMSEKNVISSTSLISGY 218

Query: 606 GKNGNPNESFALFDRMISESQIVPN-YVTFLSALSACAHAGLVSKGREIFESMERVYSMK 430
              G  +++  +F + + +  +V N  +   S +S  A   L     E++  M+R+ + +
Sbjct: 219 MNKGFFDDAEYIFRKTLDKDVVVFNAMIEGYSKVSEYAMRSL-----EVYIDMQRL-NFR 272

Query: 429 PRMEHYACMVDLLGRAGSLNQAFE 358
           P +  +A ++     A S+  AFE
Sbjct: 273 PNLSTFASIIG----ACSVLAAFE 292