BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00020323
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17573.3| unnamed protein product [Vitis vinifera]               77   2e-14
ref|XP_002509755.1| Transcription initiation factor IIE subunit ...    77   6e-13
ref|XP_002283557.1| PREDICTED: general transcription factor IIE ...    78   7e-13
ref|XP_002299546.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-12
dbj|BAE71261.1| hypothetical protein [Trifolium pratense]              74   1e-11

>emb|CBI17573.3| unnamed protein product [Vitis vinifera]
          Length = 178

 Score = 77.0 bits (188), Expect(2) = 2e-14
 Identities = 41/63 (65%), Positives = 43/63 (68%)
 Frame = -3

Query: 303 KGISSKHMPPGNSSMVNNAKSPAAPVKFSNDTERFQHINSIRKAPAGAQIIRVIDLLFET 124
           K +SSK   P N +     K P   VKFSNDTER QHINSIRKAP GAQI RVIDLL ET
Sbjct: 27  KAVSSKPSVPQNFTPAAPTKPPTPAVKFSNDTERLQHINSIRKAPVGAQIKRVIDLLLET 86

Query: 123 RPA 115
           R A
Sbjct: 87  RQA 89



 Score = 26.9 bits (58), Expect(2) = 2e-14
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = -1

Query: 374 SLVKFKKQ*EKCQS 333
           SL KFKKQ EKCQS
Sbjct: 6   SLAKFKKQQEKCQS 19


>ref|XP_002509755.1| Transcription initiation factor IIE subunit beta, putative [Ricinus
           communis] gi|223549654|gb|EEF51142.1| Transcription
           initiation factor IIE subunit beta, putative [Ricinus
           communis]
          Length = 282

 Score = 76.6 bits (187), Expect(2) = 6e-13
 Identities = 45/71 (63%), Positives = 50/71 (70%)
 Frame = -3

Query: 327 AAKAGSSNKGISSKHMPPGNSSMVNNAKSPAAPVKFSNDTERFQHINSIRKAPAGAQIIR 148
           AAKAGS    I+ K + P  S ++     PA  VKFSNDTER QHI+SIRKAP GAQI R
Sbjct: 25  AAKAGSHKPSITPKIVAP--SPIIPRTPGPA--VKFSNDTERLQHIHSIRKAPVGAQIKR 80

Query: 147 VIDLLFETRPA 115
           VIDLLFETR A
Sbjct: 81  VIDLLFETRQA 91



 Score = 21.9 bits (45), Expect(2) = 6e-13
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -1

Query: 371 LVKFKKQ*EKCQS 333
           L KFK+Q EKCQ+
Sbjct: 7   LNKFKRQQEKCQT 19


>ref|XP_002283557.1| PREDICTED: general transcription factor IIE subunit 2 [Vitis
           vinifera] gi|297742556|emb|CBI34705.3| unnamed protein
           product [Vitis vinifera]
          Length = 285

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 47/86 (54%), Positives = 51/86 (59%)
 Frame = -3

Query: 372 FGKI*ETVREMPVNAAAKAGSSNKGISSKHMPPGNSSMVNNAKSPAAPVKFSNDTERFQH 193
           F K  E  +    + AAKAGSS   +  K  P   +      K P   VKFSNDTER QH
Sbjct: 10  FKKQQEKCQSTLTSIAAKAGSSKPTVPQKFTPAAPT------KPPTPAVKFSNDTERLQH 63

Query: 192 INSIRKAPAGAQIIRVIDLLFETRPA 115
           INSIRKAP GAQI RVIDLL ETR A
Sbjct: 64  INSIRKAPVGAQIKRVIDLLLETRQA 89



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 28/53 (52%), Positives = 38/53 (71%)
 Frame = -1

Query: 176 KHLQGLKSYVSLICSLRQGQPEGIAVMDLKDSYSNIVEDFQALNASGQIWLLA 18
           K    LK    L+  +R+  PEGIAV+DLKDSY +++ED QAL A+GQ+WLL+
Sbjct: 129 KSKHDLKDRSQLLVLVRKF-PEGIAVIDLKDSYPSVMEDLQALKAAGQVWLLS 180


>ref|XP_002299546.1| predicted protein [Populus trichocarpa] gi|222846804|gb|EEE84351.1|
           predicted protein [Populus trichocarpa]
          Length = 284

 Score = 74.3 bits (181), Expect(2) = 1e-12
 Identities = 41/74 (55%), Positives = 51/74 (68%)
 Frame = -3

Query: 336 VNAAAKAGSSNKGISSKHMPPGNSSMVNNAKSPAAPVKFSNDTERFQHINSIRKAPAGAQ 157
           + + AK+  S   ++ K +    +   + A++PA  VKFSNDTER QHINSIRKAPAGAQ
Sbjct: 21  LTSIAKSRPSKSSLTQKTVAVAPAPSTS-ARTPAPAVKFSNDTERLQHINSIRKAPAGAQ 79

Query: 156 IIRVIDLLFETRPA 115
           I RVIDLL ETR A
Sbjct: 80  IKRVIDLLLETRQA 93



 Score = 23.1 bits (48), Expect(2) = 1e-12
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = -1

Query: 371 LVKFKKQ*EKCQS 333
           L +FKKQ EKCQS
Sbjct: 7   LDRFKKQQEKCQS 19


>dbj|BAE71261.1| hypothetical protein [Trifolium pratense]
          Length = 270

 Score = 73.6 bits (179), Expect(2) = 1e-11
 Identities = 36/43 (83%), Positives = 37/43 (86%)
 Frame = -3

Query: 243 SPAAPVKFSNDTERFQHINSIRKAPAGAQIIRVIDLLFETRPA 115
           SP  PVKFSNDTER QHINSIRKAP GAQ+ RVIDLLFETR A
Sbjct: 36  SPLVPVKFSNDTERLQHINSIRKAPVGAQMKRVIDLLFETRQA 78



 Score = 20.8 bits (42), Expect(2) = 1e-11
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -1

Query: 371 LVKFKKQ*EKCQS 333
           L +FKKQ EKC S
Sbjct: 7   LDRFKKQQEKCAS 19