BLASTX nr result

ID: Scutellaria24_contig00020133 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00020133
         (513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW80780.1| hypothetical protein ZEAMMB73_764756 [Zea mays]         59   4e-07
gb|AAP53710.2| transposon protein, putative, CACTA, En/Spm sub-c...    58   7e-07
gb|AAL58216.1|AC090882_19 putative transposon protein [Oryza sat...    57   1e-06
emb|CAE01503.2| OSJNBb0026L04.8 [Oryza sativa Japonica Group] gi...    57   1e-06
tpg|DAA60876.1| TPA: hypothetical protein ZEAMMB73_591499 [Zea m...    57   1e-06

>gb|AFW80780.1| hypothetical protein ZEAMMB73_764756 [Zea mays]
          Length = 862

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 35/95 (36%), Positives = 47/95 (49%), Gaps = 10/95 (10%)
 Frame = +3

Query: 84   QIDNIHATELAIGLSQGTPGFMSK----------GFLRSVDPNQKVGGRQLGSNWYEVEI 233
            QI+N    + A     GTP ++            G + SVDPNQKVGG +LG  +Y + +
Sbjct: 728  QIENRVDNKRANASKAGTPVYIKSWRHKSKNVALGTILSVDPNQKVGGLELGKEFYMLRV 787

Query: 234  STPVDWDEDLIRPYSNISTIGEAIGICVAWPRNLV 338
                  DE LIRPY N   IG+     +AWP + V
Sbjct: 788  GLTSVPDEPLIRPYDNFQVIGDVGKNPIAWPSSCV 822


>gb|AAP53710.2| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
            Japonica Group]
          Length = 1486

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/64 (40%), Positives = 41/64 (64%)
 Frame = +3

Query: 147  MSKGFLRSVDPNQKVGGRQLGSNWYEVEISTPVDWDEDLIRPYSNISTIGEAIGICVAWP 326
            +++  ++S DP + VGG  LG   Y+V I + +  D +L RP+ N++ I +AIG C+AWP
Sbjct: 1407 VARAIIQSQDPLEMVGGTMLGRECYKVVIDSLICGDAELFRPHRNLNYIRDAIGHCIAWP 1466

Query: 327  RNLV 338
              LV
Sbjct: 1467 SQLV 1470


>gb|AAL58216.1|AC090882_19 putative transposon protein [Oryza sativa Japonica Group]
          Length = 1451

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/64 (40%), Positives = 41/64 (64%)
 Frame = +3

Query: 147  MSKGFLRSVDPNQKVGGRQLGSNWYEVEISTPVDWDEDLIRPYSNISTIGEAIGICVAWP 326
            +++  ++S DP + VGG  LG   Y+V I + +  D +L RP+ N++ I +AIG C+AWP
Sbjct: 1145 VARATIQSQDPLEMVGGTMLGRECYKVVIDSLICGDAELFRPHRNLNYIRDAIGHCIAWP 1204

Query: 327  RNLV 338
              LV
Sbjct: 1205 SQLV 1208


>emb|CAE01503.2| OSJNBb0026L04.8 [Oryza sativa Japonica Group]
           gi|116309053|emb|CAH66164.1| H0107B07.3 [Oryza sativa
           Indica Group]
          Length = 634

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/64 (40%), Positives = 41/64 (64%)
 Frame = +3

Query: 147 MSKGFLRSVDPNQKVGGRQLGSNWYEVEISTPVDWDEDLIRPYSNISTIGEAIGICVAWP 326
           +++  ++S DP + VGG  LG   Y+V I + +  D +L RP+ N++ I +AIG C+AWP
Sbjct: 555 VARATIQSQDPLEMVGGTMLGRECYKVVIDSLICGDAELFRPHRNLNYIRDAIGHCIAWP 614

Query: 327 RNLV 338
             LV
Sbjct: 615 SQLV 618


>tpg|DAA60876.1| TPA: hypothetical protein ZEAMMB73_591499 [Zea mays]
          Length = 735

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/61 (45%), Positives = 36/61 (59%)
 Frame = +3

Query: 156 GFLRSVDPNQKVGGRQLGSNWYEVEISTPVDWDEDLIRPYSNISTIGEAIGICVAWPRNL 335
           G + SVDPNQKVGG +LG  +Y + +      DE LIRPY N   IG+     +AWP + 
Sbjct: 626 GTILSVDPNQKVGGLELGKEFYMLRVGLTSVPDEPLIRPYDNFQVIGDVGKNPIAWPSSC 685

Query: 336 V 338
           V
Sbjct: 686 V 686


Top