BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00020127
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...    65   8e-09
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    61   1e-07
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    58   9e-07
gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]       57   1e-06
gb|AAO23078.1| polyprotein [Glycine max]                               57   2e-06

>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
            finger, CCHC-type; Peptidase aspartic, active site;
            Polynucleotidyl transferase, Ribonuclease H fold
            [Medicago truncatula]
          Length = 1297

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 33/76 (43%), Positives = 44/76 (57%)
 Frame = +1

Query: 1    VGDQQVEPTLPPILDDDAPEFVPQAVLRFRNIWRGDERVSQVLVAWVGLSEDEATWVDEV 180
            VG+   E  LP + +D      P+ VL  R I    E++ QVLV W+G   +EATW D +
Sbjct: 1185 VGNYHEEENLPDLEEDKGVVIEPETVLTRRTIQVQGEKIDQVLVHWMGQKVEEATWEDTL 1244

Query: 181  NFRAQFPEFRLEDKAV 228
              R+QFP F LEDKA+
Sbjct: 1245 IIRSQFPNFYLEDKAM 1260


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
 Frame = +1

Query: 1    VGDQQVEPTLPPILDDDAP-EFVPQAVLRFRNIWRGDERVSQVLVAWVGLSEDEATWVDE 177
            VG  Q  PT+PP L +D   +  P+++L  R+  +    V++VL+ W+ L   EATW D 
Sbjct: 1452 VGSLQSSPTIPPQLTNDLVLDAQPESLLNIRSHPQKPAEVTEVLIKWLNLPAFEATWEDA 1511

Query: 178  VNFRAQFPEFRLEDKAV 228
              F A+FP+F LEDK +
Sbjct: 1512 ALFNARFPDFHLEDKVL 1528


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
 Frame = +1

Query: 1    VGDQQVEPTLPPILDDDAPEFV-PQAVLRFRNIWRGDERVSQVLVAWVGLSEDEATWVDE 177
            VG+  V PT+PP +D D    V P+ +L  R I +G +  ++ L+ W GL   EATW D 
Sbjct: 1519 VGNTPVLPTIPPHIDVDMELVVEPEELLDVRQIRQGKQTFTECLIKWKGLPAFEATWEDM 1578

Query: 178  VNFRAQFPEFRLEDK 222
                 +FP F LEDK
Sbjct: 1579 SPIHLRFPSFHLEDK 1593


>gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]
          Length = 2396

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 32/73 (43%), Positives = 43/73 (58%)
 Frame = +1

Query: 7    DQQVEPTLPPILDDDAPEFVPQAVLRFRNIWRGDERVSQVLVAWVGLSEDEATWVDEVNF 186
            DQ+  P LP    D  P  VP  +L+ R I RG E ++QV V W G++ED ATW D    
Sbjct: 1474 DQRASPQLP---QDVGPIQVPTRILQRRFIDRGGELIAQVKVVWSGMTEDLATWEDVEAL 1530

Query: 187  RAQFPEFRLEDKA 225
            RA+FP+  + D+A
Sbjct: 1531 RARFPKALIWDQA 1543


>gb|AAO23078.1| polyprotein [Glycine max]
          Length = 1552

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/68 (41%), Positives = 38/68 (55%)
 Frame = +1

Query: 28   LPPILDDDAPEFVPQAVLRFRNIWRGDERVSQVLVAWVGLSEDEATWVDEVNFRAQFPEF 207
            LP  + +  P   P  +L  R I RG  ++ Q+LV W    +DEATW D  + +A +P F
Sbjct: 1430 LPLTVTEMGPVMQPVKILASRIIIRGHNQIEQILVQWENGLQDEATWEDIEDIKASYPTF 1489

Query: 208  RLEDKAVF 231
             LEDK VF
Sbjct: 1490 NLEDKVVF 1497