BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00020124
         (752 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278273.1| PREDICTED: replication protein A 70 kDa DNA-...   420   e-115
gb|AAQ23194.1| RPA 70kDa subunit [Pisum sativum]                      411   e-113
ref|XP_003546476.1| PREDICTED: replication protein A 70 kDa DNA-...   409   e-112
ref|NP_973433.1| replication factor A1 [Arabidopsis thaliana] gi...   409   e-112
ref|NP_178690.1| replication factor A1 [Arabidopsis thaliana] gi...   409   e-112

>ref|XP_002278273.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit [Vitis
           vinifera] gi|297738589|emb|CBI27834.3| unnamed protein
           product [Vitis vinifera]
          Length = 622

 Score =  420 bits (1079), Expect = e-115
 Identities = 195/250 (78%), Positives = 231/250 (92%)
 Frame = +1

Query: 1   RVTCFNAVVDRFYDTIEVGKVYVISKGSLKPAQKNFNHLKNEWEIFLDITSSVDLCPDED 180
           RVTCFNAVVDRFYDTIEVGKVY+ISKGSLKPAQKNFNHLKNEWEIFL+ +SSV+LCPDED
Sbjct: 229 RVTCFNAVVDRFYDTIEVGKVYLISKGSLKPAQKNFNHLKNEWEIFLEASSSVELCPDED 288

Query: 181 ASIPRQQFSFRPISEIENAESNSILDIIGVVVTVNPSVPILRKNGMETQRRILHLKDQSG 360
            SIP+QQFSFRPISEIEN E+NSILD+IG+V++VNPSVPILRKNGMETQRRI++LKD SG
Sbjct: 289 GSIPKQQFSFRPISEIENVENNSILDVIGIVISVNPSVPILRKNGMETQRRIVNLKDGSG 348

Query: 361 RTVELTLWGDFCNREGQQLHEIVEAGVFPILAVKAGKVNDFSGKSISTISATQLFINPDF 540
           R++ELT+WG+FCNREG QL E++++G FP+LAVK+GKVNDFSGKS+ TISATQLFINPDF
Sbjct: 349 RSIELTMWGEFCNREGHQLQEMIDSGSFPVLAVKSGKVNDFSGKSVGTISATQLFINPDF 408

Query: 541 PEANRLRVWFDRGGKDTSSHSISKEFIPGARKNDVRKNLAQIKDEGLGRSDKPDWISVKA 720
            EA  LR WFDRGGK+ +S SIS++ +P   +N++RK ++QIKDEGLGRSDKPDW++VKA
Sbjct: 409 TEACNLREWFDRGGKNAASQSISRDIMPAGSRNEIRKTVSQIKDEGLGRSDKPDWVTVKA 468

Query: 721 TISFIRTDTF 750
           TISFI+TDTF
Sbjct: 469 TISFIKTDTF 478


>gb|AAQ23194.1| RPA 70kDa subunit [Pisum sativum]
          Length = 637

 Score =  411 bits (1056), Expect = e-113
 Identities = 194/250 (77%), Positives = 228/250 (91%)
 Frame = +1

Query: 1   RVTCFNAVVDRFYDTIEVGKVYVISKGSLKPAQKNFNHLKNEWEIFLDITSSVDLCPDED 180
           RVTCFNA+VDRFYD+IEVGKVY+ISKG+LKPAQKNFNHLKNEWEI LD+ S+V+LCPDED
Sbjct: 242 RVTCFNAIVDRFYDSIEVGKVYLISKGNLKPAQKNFNHLKNEWEIMLDLNSTVELCPDED 301

Query: 181 ASIPRQQFSFRPISEIENAESNSILDIIGVVVTVNPSVPILRKNGMETQRRILHLKDQSG 360
            S P+QQFSFRPIS+IEN ESN+ILD+IGVV +VNPSVPILRKNGMET RRIL+LKD SG
Sbjct: 302 GSYPKQQFSFRPISDIENVESNAILDVIGVVTSVNPSVPILRKNGMETLRRILNLKDNSG 361

Query: 361 RTVELTLWGDFCNREGQQLHEIVEAGVFPILAVKAGKVNDFSGKSISTISATQLFINPDF 540
           R+VELTLWG+FCNREGQ+L E+V+AGVFPILAVKAGKVN+FSGKSI +IS TQLFINPDF
Sbjct: 362 RSVELTLWGEFCNREGQKLQEMVDAGVFPILAVKAGKVNEFSGKSIGSISTTQLFINPDF 421

Query: 541 PEANRLRVWFDRGGKDTSSHSISKEFIPGARKNDVRKNLAQIKDEGLGRSDKPDWISVKA 720
           PEA  LR WFD+ GKD++S SISK+   G  KN++RK ++QI+DEGLGRSDKPDWI+++A
Sbjct: 422 PEAQSLRAWFDQVGKDSASLSISKDITHGGPKNEIRKTVSQIRDEGLGRSDKPDWITIRA 481

Query: 721 TISFIRTDTF 750
           TISF++TDTF
Sbjct: 482 TISFMKTDTF 491


>ref|XP_003546476.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Glycine max]
          Length = 637

 Score =  409 bits (1052), Expect = e-112
 Identities = 198/250 (79%), Positives = 225/250 (90%)
 Frame = +1

Query: 1   RVTCFNAVVDRFYDTIEVGKVYVISKGSLKPAQKNFNHLKNEWEIFLDITSSVDLCPDED 180
           RVTCFNAVVDRFY+ IEVGKVY+ISKGSLKPAQKNFNHLKNEWEI L+ +S V+LCPDED
Sbjct: 242 RVTCFNAVVDRFYNVIEVGKVYMISKGSLKPAQKNFNHLKNEWEILLESSSMVELCPDED 301

Query: 181 ASIPRQQFSFRPISEIENAESNSILDIIGVVVTVNPSVPILRKNGMETQRRILHLKDQSG 360
            SIPRQQFSFRPIS+IEN ++NSILD+IGVV +VNPSVPILRKNGMETQRRIL LKD SG
Sbjct: 302 GSIPRQQFSFRPISDIENVDNNSILDVIGVVTSVNPSVPILRKNGMETQRRILSLKDSSG 361

Query: 361 RTVELTLWGDFCNREGQQLHEIVEAGVFPILAVKAGKVNDFSGKSISTISATQLFINPDF 540
            +VELTLWG+FCNREGQQL ++V+AG FPILAVK GKVNDFSGKSI +IS TQLFINPDF
Sbjct: 362 SSVELTLWGEFCNREGQQLQDMVDAGFFPILAVKTGKVNDFSGKSIGSISTTQLFINPDF 421

Query: 541 PEANRLRVWFDRGGKDTSSHSISKEFIPGARKNDVRKNLAQIKDEGLGRSDKPDWISVKA 720
           PEA+ LR WF+  GKD++S SISK+ IPGA KN+VRK ++QIKDEGLGRSDKPDWI+V+A
Sbjct: 422 PEAHSLREWFELVGKDSASLSISKDIIPGALKNEVRKTVSQIKDEGLGRSDKPDWITVRA 481

Query: 721 TISFIRTDTF 750
            I FI+TDTF
Sbjct: 482 AILFIKTDTF 491


>ref|NP_973433.1| replication factor A1 [Arabidopsis thaliana]
           gi|330250915|gb|AEC06009.1| replication factor A1
           [Arabidopsis thaliana]
          Length = 617

 Score =  409 bits (1050), Expect = e-112
 Identities = 191/251 (76%), Positives = 232/251 (92%), Gaps = 1/251 (0%)
 Frame = +1

Query: 1   RVTCFNAVVDRFYDTIEVGKVYVISKGSLKPAQKNFNHLKNEWEIFLDITSSVDLCPDED 180
           RVTCFNA+VDRFYD  EVGKVY+ISKGSLKPAQKNFNHLKNEWEIFL+ TS+V+LCPDED
Sbjct: 225 RVTCFNALVDRFYDVTEVGKVYLISKGSLKPAQKNFNHLKNEWEIFLESTSTVELCPDED 284

Query: 181 ASIPRQQFSFRPISEIENAESNSILDIIGVVVTVNPSVPILRKNGMETQRRILHLKDQSG 360
            SIP+QQFSFRPIS+IENAE+N+ILD+IGVV +VNPSVPILRKNGMET RRIL+LKD+SG
Sbjct: 285 GSIPKQQFSFRPISDIENAENNTILDVIGVVTSVNPSVPILRKNGMETHRRILNLKDESG 344

Query: 361 RTVELTLWGDFCNREGQQLHEIVEAGVFPILAVKAGKVNDFSGKSISTISATQLFINPDF 540
           + VE+TLWG+FCNR+G+QL E+V++   P+LA+KAGKV+DFSGKS+ TIS+TQLFINPDF
Sbjct: 345 KAVEVTLWGEFCNRDGRQLEEMVDSAFHPVLAIKAGKVSDFSGKSVGTISSTQLFINPDF 404

Query: 541 PEANRLRVWFDRGGKDTSSHSISKEFIP-GARKNDVRKNLAQIKDEGLGRSDKPDWISVK 717
           PEA++LR WFD GGKDT+S SIS++ +P G  +N++RKN++QIK+EGLGRSDKPDWI+VK
Sbjct: 405 PEAHKLRTWFDYGGKDTASFSISRDTMPGGVSRNEIRKNVSQIKEEGLGRSDKPDWITVK 464

Query: 718 ATISFIRTDTF 750
           ATISFI+TD+F
Sbjct: 465 ATISFIKTDSF 475


>ref|NP_178690.1| replication factor A1 [Arabidopsis thaliana]
            gi|4584356|gb|AAD25150.1| putative replication protein A1
            [Arabidopsis thaliana] gi|26452416|dbj|BAC43293.1|
            putative replication protein A1 [Arabidopsis thaliana]
            gi|29029004|gb|AAO64881.1| At2g06510 [Arabidopsis
            thaliana] gi|330250916|gb|AEC06010.1| replication factor
            A1 [Arabidopsis thaliana]
          Length = 640

 Score =  409 bits (1050), Expect = e-112
 Identities = 191/251 (76%), Positives = 232/251 (92%), Gaps = 1/251 (0%)
 Frame = +1

Query: 1    RVTCFNAVVDRFYDTIEVGKVYVISKGSLKPAQKNFNHLKNEWEIFLDITSSVDLCPDED 180
            RVTCFNA+VDRFYD  EVGKVY+ISKGSLKPAQKNFNHLKNEWEIFL+ TS+V+LCPDED
Sbjct: 248  RVTCFNALVDRFYDVTEVGKVYLISKGSLKPAQKNFNHLKNEWEIFLESTSTVELCPDED 307

Query: 181  ASIPRQQFSFRPISEIENAESNSILDIIGVVVTVNPSVPILRKNGMETQRRILHLKDQSG 360
             SIP+QQFSFRPIS+IENAE+N+ILD+IGVV +VNPSVPILRKNGMET RRIL+LKD+SG
Sbjct: 308  GSIPKQQFSFRPISDIENAENNTILDVIGVVTSVNPSVPILRKNGMETHRRILNLKDESG 367

Query: 361  RTVELTLWGDFCNREGQQLHEIVEAGVFPILAVKAGKVNDFSGKSISTISATQLFINPDF 540
            + VE+TLWG+FCNR+G+QL E+V++   P+LA+KAGKV+DFSGKS+ TIS+TQLFINPDF
Sbjct: 368  KAVEVTLWGEFCNRDGRQLEEMVDSAFHPVLAIKAGKVSDFSGKSVGTISSTQLFINPDF 427

Query: 541  PEANRLRVWFDRGGKDTSSHSISKEFIP-GARKNDVRKNLAQIKDEGLGRSDKPDWISVK 717
            PEA++LR WFD GGKDT+S SIS++ +P G  +N++RKN++QIK+EGLGRSDKPDWI+VK
Sbjct: 428  PEAHKLRTWFDYGGKDTASFSISRDTMPGGVSRNEIRKNVSQIKEEGLGRSDKPDWITVK 487

Query: 718  ATISFIRTDTF 750
            ATISFI+TD+F
Sbjct: 488  ATISFIKTDSF 498