BLASTX nr result

ID: Scutellaria24_contig00020116 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00020116
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17361.3| unnamed protein product [Vitis vinifera]              150   1e-34
ref|XP_002327649.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34
ref|XP_002265670.1| PREDICTED: E3 ubiquitin-protein ligase RNF16...   150   1e-34
ref|XP_002529649.1| zinc finger protein, putative [Ricinus commu...   128   4e-28
ref|XP_003581622.1| PREDICTED: E3 ubiquitin-protein ligase RNF13...   123   2e-26

>emb|CBI17361.3| unnamed protein product [Vitis vinifera]
          Length = 352

 Score =  150 bits (378), Expect = 1e-34
 Identities = 71/129 (55%), Positives = 94/129 (72%), Gaps = 1/129 (0%)
 Frame = -3

Query: 384 SPARFSRELNGSAICGNLELADPLVACSPLLNEVEHSDGDSARIVLIVRGKCAFEEKIRY 205
           +PARF+  +N + ICG L LADPL ACS LLN     + D+ +  LI+RGKCAFE+K+R 
Sbjct: 97  APARFAVSVNSTGICGALHLADPLEACSSLLNRFRSQEIDTIKFALIIRGKCAFEDKVRN 156

Query: 204 AQEAGFRAAIVYDDQHNHNLISMMGNPEGLWIYAVFVSNEAGKILRQNARGVEGDCCIIS 25
           AQ+AGF A IVYDD+   NL+SM+GN +G+W+ AVFVS  AG+ L+  A+G EG+CCII+
Sbjct: 157 AQDAGFHAVIVYDDRDKGNLVSMIGNSQGIWVPAVFVSKAAGETLKIYAQGQEGECCIIN 216

Query: 24  P-INETGWT 1
           P   E+ WT
Sbjct: 217 PSFPESAWT 225


>ref|XP_002327649.1| predicted protein [Populus trichocarpa] gi|222836734|gb|EEE75127.1|
           predicted protein [Populus trichocarpa]
          Length = 311

 Score =  150 bits (378), Expect = 1e-34
 Identities = 73/127 (57%), Positives = 95/127 (74%)
 Frame = -3

Query: 381 PARFSRELNGSAICGNLELADPLVACSPLLNEVEHSDGDSARIVLIVRGKCAFEEKIRYA 202
           PA+ +  LNGS++CG+L +A+PL ACSPL N  E ++  S R  LIVRG+CAFE+KI+ A
Sbjct: 38  PAKSALSLNGSSVCGSLHVANPLDACSPLRNRFEFNE--SGRFALIVRGECAFEDKIKNA 95

Query: 201 QEAGFRAAIVYDDQHNHNLISMMGNPEGLWIYAVFVSNEAGKILRQNARGVEGDCCIISP 22
           Q AGFRAAIV+DD+ N NLI MM NPEG+ ++AVFV+  AG+IL+  ARG EG+CCI S 
Sbjct: 96  QSAGFRAAIVFDDKDNRNLIYMMVNPEGIKVHAVFVTKYAGEILKDRARGKEGECCIYSS 155

Query: 21  INETGWT 1
             +  WT
Sbjct: 156 RTDAAWT 162


>ref|XP_002265670.1| PREDICTED: E3 ubiquitin-protein ligase RNF167 [Vitis vinifera]
          Length = 294

 Score =  150 bits (378), Expect = 1e-34
 Identities = 71/129 (55%), Positives = 94/129 (72%), Gaps = 1/129 (0%)
 Frame = -3

Query: 384 SPARFSRELNGSAICGNLELADPLVACSPLLNEVEHSDGDSARIVLIVRGKCAFEEKIRY 205
           +PARF+  +N + ICG L LADPL ACS LLN     + D+ +  LI+RGKCAFE+K+R 
Sbjct: 39  APARFAVSVNSTGICGALHLADPLEACSSLLNRFRSQEIDTIKFALIIRGKCAFEDKVRN 98

Query: 204 AQEAGFRAAIVYDDQHNHNLISMMGNPEGLWIYAVFVSNEAGKILRQNARGVEGDCCIIS 25
           AQ+AGF A IVYDD+   NL+SM+GN +G+W+ AVFVS  AG+ L+  A+G EG+CCII+
Sbjct: 99  AQDAGFHAVIVYDDRDKGNLVSMIGNSQGIWVPAVFVSKAAGETLKIYAQGQEGECCIIN 158

Query: 24  P-INETGWT 1
           P   E+ WT
Sbjct: 159 PSFPESAWT 167


>ref|XP_002529649.1| zinc finger protein, putative [Ricinus communis]
           gi|223530875|gb|EEF32736.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 577

 Score =  128 bits (322), Expect = 4e-28
 Identities = 65/130 (50%), Positives = 88/130 (67%), Gaps = 3/130 (2%)
 Frame = -3

Query: 381 PARFSRELNGSAICGNLELADPLVACSPLLN---EVEHSDGDSARIVLIVRGKCAFEEKI 211
           PA+ +  LN S ICG L +A+PL ACS + N   E+  ++    R  LI RG C+FE+KI
Sbjct: 41  PAKSAAGLNKSGICGALHVANPLDACSWIRNNGFEMNETEKGVVRFALIERGGCSFEDKI 100

Query: 210 RYAQEAGFRAAIVYDDQHNHNLISMMGNPEGLWIYAVFVSNEAGKILRQNARGVEGDCCI 31
           R  Q  GF AAIV+DD+   NL+ MM NPEG+ ++AVFVS  AG+IL+++ARG EG+CCI
Sbjct: 101 RNVQNGGFTAAIVFDDRDKRNLVYMMMNPEGIKVHAVFVSKIAGEILKEHARGEEGECCI 160

Query: 30  ISPINETGWT 1
               ++T WT
Sbjct: 161 YPSHSDTAWT 170


>ref|XP_003581622.1| PREDICTED: E3 ubiquitin-protein ligase RNF13-like [Brachypodium
           distachyon]
          Length = 270

 Score =  123 bits (308), Expect = 2e-26
 Identities = 63/129 (48%), Positives = 87/129 (67%), Gaps = 1/129 (0%)
 Frame = -3

Query: 384 SPARFSRELNGSAICGNLELADPLVACSPLLNEVEHSDGDSAR-IVLIVRGKCAFEEKIR 208
           +PARF   ++G  ICG+L  ADP  AC+P+ N    S G   R  VL+VRG C+FE+K+R
Sbjct: 31  APARFGPRVSGDGICGSLRSADPSDACTPIKN----SAGSGGRAFVLVVRGNCSFEDKVR 86

Query: 207 YAQEAGFRAAIVYDDQHNHNLISMMGNPEGLWIYAVFVSNEAGKILRQNARGVEGDCCII 28
            AQ AGF A +VYDD+   +L SM+G+ EG+ I AVF+S  AG+ L++ ARG + +CCI 
Sbjct: 87  EAQRAGFNAVVVYDDEEKASLYSMVGDSEGIHIPAVFLSKMAGETLKKFARGEDSECCIE 146

Query: 27  SPINETGWT 1
           S ++ET  T
Sbjct: 147 SSMDETAGT 155


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