BLASTX nr result

ID: Scutellaria24_contig00020043 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00020043
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512275.1| pentatricopeptide repeat-containing protein,...   135   3e-30
ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containi...   132   2e-29
ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containi...   132   2e-29
ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containi...   130   1e-28
dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]                      130   1e-28

>ref|XP_002512275.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548236|gb|EEF49727.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 532

 Score =  135 bits (340), Expect = 3e-30
 Identities = 64/99 (64%), Positives = 79/99 (79%)
 Frame = +3

Query: 3   DVDQCMKVWDEMNKRNMCPNAFTFSVLINGLCKENRLNEARDILRQLNRREDIVPQPFIY 182
           D+   +KVWD M  RN+ PN +T+SV+IN LCK+NR++EARD+LRQL +  D+ P+PFIY
Sbjct: 354 DIRLGLKVWDVMKARNVSPNIYTYSVIINALCKDNRIHEARDLLRQL-KCSDVFPKPFIY 412

Query: 183 NPVIDVFCKAGNIDEANAIVAEMEAKGCIHDKMTFTILI 299
           NPVID FCKAGN+DEAN IV EME K C  DK+TFTILI
Sbjct: 413 NPVIDGFCKAGNVDEANVIVTEMEEKRCRPDKVTFTILI 451



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/99 (31%), Positives = 54/99 (54%)
 Frame = +3

Query: 3   DVDQCMKVWDEMNKRNMCPNAFTFSVLINGLCKENRLNEARDILRQLNRREDIVPQPFIY 182
           +V++  ++++ M      P+  T++ LI+GLCK N L+ A D+L+++  R D  P    Y
Sbjct: 213 EVEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCSPDVMTY 272

Query: 183 NPVIDVFCKAGNIDEANAIVAEMEAKGCIHDKMTFTILI 299
             +I  F K G ++ A+ +  EM   G     +TF +LI
Sbjct: 273 TSIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLI 311


>ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  132 bits (333), Expect = 2e-29
 Identities = 63/99 (63%), Positives = 79/99 (79%)
 Frame = +3

Query: 3   DVDQCMKVWDEMNKRNMCPNAFTFSVLINGLCKENRLNEARDILRQLNRREDIVPQPFIY 182
           +V+Q +K+W+EM  RN+ PN +T++VLIN LCKENR+ EAR+ LR L   E +VP+PFIY
Sbjct: 370 EVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSE-VVPKPFIY 428

Query: 183 NPVIDVFCKAGNIDEANAIVAEMEAKGCIHDKMTFTILI 299
           NPVID FCKAG +DEAN IVAEM+ K C  DK+TFTILI
Sbjct: 429 NPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILI 467



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 25/99 (25%), Positives = 52/99 (52%)
 Frame = +3

Query: 3   DVDQCMKVWDEMNKRNMCPNAFTFSVLINGLCKENRLNEARDILRQLNRREDIVPQPFIY 182
           ++D+  + +  M      P+  +++ LING C+ N +++  D+L++    + + P    Y
Sbjct: 229 EIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITY 288

Query: 183 NPVIDVFCKAGNIDEANAIVAEMEAKGCIHDKMTFTILI 299
             +I  +CK G++  A+ +  EM + G   +  TF +LI
Sbjct: 289 TSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLI 327


>ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  132 bits (333), Expect = 2e-29
 Identities = 63/99 (63%), Positives = 79/99 (79%)
 Frame = +3

Query: 3   DVDQCMKVWDEMNKRNMCPNAFTFSVLINGLCKENRLNEARDILRQLNRREDIVPQPFIY 182
           +V+Q +K+W+EM  RN+ PN +T++VLIN LCKENR+ EAR+ LR L   E +VP+PFIY
Sbjct: 370 EVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSE-VVPKPFIY 428

Query: 183 NPVIDVFCKAGNIDEANAIVAEMEAKGCIHDKMTFTILI 299
           NPVID FCKAG +DEAN IVAEM+ K C  DK+TFTILI
Sbjct: 429 NPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILI 467



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 25/99 (25%), Positives = 52/99 (52%)
 Frame = +3

Query: 3   DVDQCMKVWDEMNKRNMCPNAFTFSVLINGLCKENRLNEARDILRQLNRREDIVPQPFIY 182
           ++D+  + +  M      P+  +++ LING C+ N +++  D+L++    + + P    Y
Sbjct: 229 EIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITY 288

Query: 183 NPVIDVFCKAGNIDEANAIVAEMEAKGCIHDKMTFTILI 299
             +I  +CK G++  A+ +  EM + G   +  TF +LI
Sbjct: 289 TSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLI 327


>ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Vitis vinifera]
          Length = 641

 Score =  130 bits (326), Expect = 1e-28
 Identities = 62/98 (63%), Positives = 77/98 (78%)
 Frame = +3

Query: 6   VDQCMKVWDEMNKRNMCPNAFTFSVLINGLCKENRLNEARDILRQLNRREDIVPQPFIYN 185
           V++ +K+W E+N RN+ PN +TF++L N LCKENRL+EAR  LR L  R  IV QPF+YN
Sbjct: 394 VERSLKLWHELNARNLSPNEYTFAILTNALCKENRLHEARGFLRDLKWRH-IVAQPFMYN 452

Query: 186 PVIDVFCKAGNIDEANAIVAEMEAKGCIHDKMTFTILI 299
           PVID FCKAGN+DEAN I+AEME K C  DK+T+TILI
Sbjct: 453 PVIDGFCKAGNVDEANVILAEMEEKRCKPDKITYTILI 490



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 30/98 (30%), Positives = 55/98 (56%)
 Frame = +3

Query: 6   VDQCMKVWDEMNKRNMCPNAFTFSVLINGLCKENRLNEARDILRQLNRREDIVPQPFIYN 185
           VD+  ++++EM      P+  T++ LING C+ N ++   D+L++L  + D+ P    Y 
Sbjct: 253 VDKAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYT 312

Query: 186 PVIDVFCKAGNIDEANAIVAEMEAKGCIHDKMTFTILI 299
            +I  +CK G +++A+ +   M + G   +  TF ILI
Sbjct: 313 SIISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILI 350


>dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]
          Length = 536

 Score =  130 bits (326), Expect = 1e-28
 Identities = 63/98 (64%), Positives = 77/98 (78%)
 Frame = +3

Query: 6   VDQCMKVWDEMNKRNMCPNAFTFSVLINGLCKENRLNEARDILRQLNRREDIVPQPFIYN 185
           V Q  ++W+EMN R M PNAFT+S+LIN LC ENRL +AR++L QL  + DI+PQPF+YN
Sbjct: 363 VSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASK-DIIPQPFMYN 421

Query: 186 PVIDVFCKAGNIDEANAIVAEMEAKGCIHDKMTFTILI 299
           PVID FCKAG ++EAN IV EME K C  DK+TFTILI
Sbjct: 422 PVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILI 459



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 25/81 (30%), Positives = 44/81 (54%)
 Frame = +3

Query: 57  PNAFTFSVLINGLCKENRLNEARDILRQLNRREDIVPQPFIYNPVIDVFCKAGNIDEANA 236
           P+  T++ LI G CK N LN+A ++ + +       P    Y  +I  +CKAG + EA++
Sbjct: 239 PDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASS 298

Query: 237 IVAEMEAKGCIHDKMTFTILI 299
           ++ +M   G     +TF +L+
Sbjct: 299 LLDDMLRLGIYPTNVTFNVLV 319


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