BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00019979
         (745 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAJ38374.1| transcription initiation factor [Plantago major]       97   9e-40
emb|CBI19296.3| unnamed protein product [Vitis vinifera]               87   4e-34
ref|NP_194175.1| transcription initiation factor IIA subunit 2 [...    85   3e-33
ref|XP_003569111.1| PREDICTED: transcription initiation factor I...    86   3e-33
ref|XP_002527359.1| transcription initiation factor iia (tfiia),...    85   3e-33

>emb|CAJ38374.1| transcription initiation factor [Plantago major]
          Length = 114

 Score = 97.1 bits (240), Expect(2) = 9e-40
 Identities = 44/47 (93%), Positives = 47/47 (100%)
 Frame = +1

Query: 337 KGHLHTYRFCDNVWTFILQNAQLKSEEGQETVDSVKIVACDSKLLTQ 477
           KGHLHTYRFCDNVWTFI+QNAQLKSEEGQETV++VKIVACDSKLLTQ
Sbjct: 68  KGHLHTYRFCDNVWTFIVQNAQLKSEEGQETVETVKIVACDSKLLTQ 114



 Score = 93.2 bits (230), Expect(2) = 9e-40
 Identities = 47/49 (95%), Positives = 48/49 (97%)
 Frame = +2

Query: 89  IGERMATFELYRRSTIGMCLTETLDQMVSSGVLSPELAIQVLIQFDKSM 235
           IG+ MATFELYRRSTIGMCLTETLDQMVSSGVLSPELAIQVLIQFDKSM
Sbjct: 5   IGKTMATFELYRRSTIGMCLTETLDQMVSSGVLSPELAIQVLIQFDKSM 53


>emb|CBI19296.3| unnamed protein product [Vitis vinifera]
          Length = 163

 Score = 86.7 bits (213), Expect(2) = 4e-34
 Identities = 44/52 (84%), Positives = 47/52 (90%)
 Frame = +2

Query: 80  SISIGERMATFELYRRSTIGMCLTETLDQMVSSGVLSPELAIQVLIQFDKSM 235
           S SI  RMATFELYRRSTIGMCLTETLD+MV +G LSPELAIQVL+QFDKSM
Sbjct: 51  SPSIIVRMATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSM 102



 Score = 84.7 bits (208), Expect(2) = 4e-34
 Identities = 39/47 (82%), Positives = 41/47 (87%)
 Frame = +1

Query: 337 KGHLHTYRFCDNVWTFILQNAQLKSEEGQETVDSVKIVACDSKLLTQ 477
           KGHLHTYRFCDNVWTFILQ+A  K+EE QE V  VKIVACDSKLLTQ
Sbjct: 117 KGHLHTYRFCDNVWTFILQDALFKNEESQENVGRVKIVACDSKLLTQ 163


>ref|NP_194175.1| transcription initiation factor IIA subunit 2 [Arabidopsis
           thaliana] gi|30686529|ref|NP_849434.1| transcription
           initiation factor IIA subunit 2 [Arabidopsis thaliana]
           gi|297803670|ref|XP_002869719.1| transcription
           initiation factor IIA gamma chain [Arabidopsis lyrata
           subsp. lyrata] gi|20141796|sp|Q39236.2|T2AG_ARATH
           RecName: Full=Transcription initiation factor IIA
           subunit 2; AltName: Full=General transcription factor
           IIA subunit 2; AltName: Full=Transcription initiation
           factor IIA gamma chain; Short=TFIIA-gamma
           gi|2826882|emb|CAA11524.1| transcription factor IIA
           small subunit [Arabidopsis thaliana]
           gi|5051786|emb|CAB45079.1| transcription factor IIA
           small subunit [Arabidopsis thaliana]
           gi|7269294|emb|CAB79354.1| transcription factor IIA
           small subunit [Arabidopsis thaliana]
           gi|18176271|gb|AAL60014.1| putative transcription factor
           IIA small subunit [Arabidopsis thaliana]
           gi|20465319|gb|AAM20063.1| putative transcription factor
           IIA small subunit [Arabidopsis thaliana]
           gi|21553865|gb|AAM62958.1| transcription factor IIA
           small subunit [Arabidopsis thaliana]
           gi|39545876|gb|AAR28001.1| TFIIA-S [Arabidopsis
           thaliana] gi|222424034|dbj|BAH19978.1| AT4G24440
           [Arabidopsis thaliana] gi|297315555|gb|EFH45978.1|
           transcription initiation factor IIA gamma chain
           [Arabidopsis lyrata subsp. lyrata]
           gi|332659504|gb|AEE84904.1| transcription initiation
           factor IIA subunit 2 [Arabidopsis thaliana]
           gi|332659505|gb|AEE84905.1| transcription initiation
           factor IIA subunit 2 [Arabidopsis thaliana]
          Length = 106

 Score = 84.7 bits (208), Expect(2) = 3e-33
 Identities = 41/45 (91%), Positives = 43/45 (95%)
 Frame = +2

Query: 101 MATFELYRRSTIGMCLTETLDQMVSSGVLSPELAIQVLIQFDKSM 235
           MATFELYRRSTIGMCLTETLD+MV SG LSPELAIQVL+QFDKSM
Sbjct: 1   MATFELYRRSTIGMCLTETLDEMVQSGTLSPELAIQVLVQFDKSM 45



 Score = 84.0 bits (206), Expect(2) = 3e-33
 Identities = 38/47 (80%), Positives = 41/47 (87%)
 Frame = +1

Query: 337 KGHLHTYRFCDNVWTFILQNAQLKSEEGQETVDSVKIVACDSKLLTQ 477
           KGHLHTYRFCDNVWTFILQ+A  KS++ QE V  VKIVACDSKLLTQ
Sbjct: 60  KGHLHTYRFCDNVWTFILQDAMFKSDDRQENVSRVKIVACDSKLLTQ 106


>ref|XP_003569111.1| PREDICTED: transcription initiation factor IIA subunit 2-like
           [Brachypodium distachyon]
          Length = 106

 Score = 86.3 bits (212), Expect(2) = 3e-33
 Identities = 42/45 (93%), Positives = 44/45 (97%)
 Frame = +2

Query: 101 MATFELYRRSTIGMCLTETLDQMVSSGVLSPELAIQVLIQFDKSM 235
           MATFELYRRSTIGMCLTETLD+MVSSG LSPELAIQVL+QFDKSM
Sbjct: 1   MATFELYRRSTIGMCLTETLDEMVSSGTLSPELAIQVLVQFDKSM 45



 Score = 82.0 bits (201), Expect(2) = 3e-33
 Identities = 38/47 (80%), Positives = 40/47 (85%)
 Frame = +1

Query: 337 KGHLHTYRFCDNVWTFILQNAQLKSEEGQETVDSVKIVACDSKLLTQ 477
           KGHLHTYRFCDNVWTFIL +AQ K+EE  E V  VKIVACDSKLLTQ
Sbjct: 60  KGHLHTYRFCDNVWTFILTDAQFKNEETTEQVGKVKIVACDSKLLTQ 106


>ref|XP_002527359.1| transcription initiation factor iia (tfiia), gamma chain, putative
           [Ricinus communis] gi|223533278|gb|EEF35031.1|
           transcription initiation factor iia (tfiia), gamma
           chain, putative [Ricinus communis]
          Length = 106

 Score = 84.7 bits (208), Expect(2) = 3e-33
 Identities = 41/45 (91%), Positives = 43/45 (95%)
 Frame = +2

Query: 101 MATFELYRRSTIGMCLTETLDQMVSSGVLSPELAIQVLIQFDKSM 235
           MATFELYRRSTIGMCLTETLD+MV SG LSPELAIQVL+QFDKSM
Sbjct: 1   MATFELYRRSTIGMCLTETLDEMVQSGTLSPELAIQVLVQFDKSM 45



 Score = 83.6 bits (205), Expect(2) = 3e-33
 Identities = 38/47 (80%), Positives = 41/47 (87%)
 Frame = +1

Query: 337 KGHLHTYRFCDNVWTFILQNAQLKSEEGQETVDSVKIVACDSKLLTQ 477
           KGHLHTYRFCDNVWTFILQ+A  K+E+ QE V  VKIVACDSKLLTQ
Sbjct: 60  KGHLHTYRFCDNVWTFILQDALFKNEDSQENVGRVKIVACDSKLLTQ 106