BLASTX nr result

ID: Scutellaria24_contig00019937 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00019937
         (432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321105.1| predicted protein [Populus trichocarpa] gi|2...   242   2e-62
ref|XP_002264970.2| PREDICTED: DNA topoisomerase 3-beta-1-like [...   241   3e-62
emb|CBI39422.3| unnamed protein product [Vitis vinifera]              241   3e-62
ref|XP_002516387.1| prokaryotic DNA topoisomerase, putative [Ric...   238   4e-61
ref|XP_002881210.1| DNA topoisomerase family protein [Arabidopsi...   235   2e-60

>ref|XP_002321105.1| predicted protein [Populus trichocarpa] gi|222861878|gb|EEE99420.1|
           predicted protein [Populus trichocarpa]
          Length = 837

 Score =  242 bits (618), Expect = 2e-62
 Identities = 114/144 (79%), Positives = 132/144 (91%)
 Frame = +1

Query: 1   KGFTCIMPWLAVAEINIPQFTEGQKIDISRIEVDEGNTQPPDYLTESDLISLMEKYGIGT 180
           KGFT IMPWLAV+E N+PQF +G KI++S++E+ EG T PPDYL+ES+LISLMEK GIGT
Sbjct: 417 KGFTSIMPWLAVSEKNLPQFAKGDKIEVSKVELFEGQTVPPDYLSESELISLMEKNGIGT 476

Query: 181 DASIPVHINNICERNYVQVQPGRRLVPTALGISLIRGYQCIDPDLCLPDIRGFIEHQITL 360
           DASI VHINNICERNYVQVQ GR+LVPTALGI+LIRGYQCIDPDLCLPDIRGFIE QITL
Sbjct: 477 DASISVHINNICERNYVQVQAGRKLVPTALGITLIRGYQCIDPDLCLPDIRGFIEQQITL 536

Query: 361 VAKGQADHSLVVEHVIDQFKRKFT 432
           VAKG+ADHS VV+HV++QFKRK++
Sbjct: 537 VAKGEADHSCVVQHVLEQFKRKYS 560


>ref|XP_002264970.2| PREDICTED: DNA topoisomerase 3-beta-1-like [Vitis vinifera]
          Length = 894

 Score =  241 bits (616), Expect = 3e-62
 Identities = 115/143 (80%), Positives = 129/143 (90%)
 Frame = +1

Query: 1   KGFTCIMPWLAVAEINIPQFTEGQKIDISRIEVDEGNTQPPDYLTESDLISLMEKYGIGT 180
           KGFT IMPWLAV E N+PQF +G+KI++S++E+ EG T PPDYL+ES+LISLMEK GIGT
Sbjct: 472 KGFTSIMPWLAVNEKNLPQFKKGEKIEVSKVELYEGETSPPDYLSESELISLMEKNGIGT 531

Query: 181 DASIPVHINNICERNYVQVQPGRRLVPTALGISLIRGYQCIDPDLCLPDIRGFIEHQITL 360
           DASIPVHINNICERN+VQVQ GR+LVPTALGISLIRGYQCIDPDLCLPDIR FIE QITL
Sbjct: 532 DASIPVHINNICERNFVQVQAGRKLVPTALGISLIRGYQCIDPDLCLPDIRSFIEQQITL 591

Query: 361 VAKGQADHSLVVEHVIDQFKRKF 429
           VAKGQ DHS VVEHV+ QFK+KF
Sbjct: 592 VAKGQVDHSRVVEHVLQQFKQKF 614


>emb|CBI39422.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  241 bits (616), Expect = 3e-62
 Identities = 115/143 (80%), Positives = 129/143 (90%)
 Frame = +1

Query: 1   KGFTCIMPWLAVAEINIPQFTEGQKIDISRIEVDEGNTQPPDYLTESDLISLMEKYGIGT 180
           KGFT IMPWLAV E N+PQF +G+KI++S++E+ EG T PPDYL+ES+LISLMEK GIGT
Sbjct: 488 KGFTSIMPWLAVNEKNLPQFKKGEKIEVSKVELYEGETSPPDYLSESELISLMEKNGIGT 547

Query: 181 DASIPVHINNICERNYVQVQPGRRLVPTALGISLIRGYQCIDPDLCLPDIRGFIEHQITL 360
           DASIPVHINNICERN+VQVQ GR+LVPTALGISLIRGYQCIDPDLCLPDIR FIE QITL
Sbjct: 548 DASIPVHINNICERNFVQVQAGRKLVPTALGISLIRGYQCIDPDLCLPDIRSFIEQQITL 607

Query: 361 VAKGQADHSLVVEHVIDQFKRKF 429
           VAKGQ DHS VVEHV+ QFK+KF
Sbjct: 608 VAKGQVDHSRVVEHVLQQFKQKF 630


>ref|XP_002516387.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
           gi|223544485|gb|EEF46004.1| prokaryotic DNA
           topoisomerase, putative [Ricinus communis]
          Length = 865

 Score =  238 bits (607), Expect = 4e-61
 Identities = 114/144 (79%), Positives = 127/144 (88%)
 Frame = +1

Query: 1   KGFTCIMPWLAVAEINIPQFTEGQKIDISRIEVDEGNTQPPDYLTESDLISLMEKYGIGT 180
           +GFT IMPWLAV E N+PQ  +G+KI++ R+E+ EG T PPDYLTES+LISLMEK GIGT
Sbjct: 444 EGFTSIMPWLAVTEKNLPQLVKGEKIEVLRMELLEGKTTPPDYLTESELISLMEKNGIGT 503

Query: 181 DASIPVHINNICERNYVQVQPGRRLVPTALGISLIRGYQCIDPDLCLPDIRGFIEHQITL 360
           DASIPVHINNICERNYVQVQ GRRL PT LGI+LIRGYQCIDPDLCLPDIR FIE QITL
Sbjct: 504 DASIPVHINNICERNYVQVQAGRRLAPTILGITLIRGYQCIDPDLCLPDIRSFIEQQITL 563

Query: 361 VAKGQADHSLVVEHVIDQFKRKFT 432
           VAKGQADHS VV+HV+ QFK+KFT
Sbjct: 564 VAKGQADHSRVVQHVLQQFKQKFT 587


>ref|XP_002881210.1| DNA topoisomerase family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297327049|gb|EFH57469.1| DNA topoisomerase family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 865

 Score =  235 bits (600), Expect = 2e-60
 Identities = 113/144 (78%), Positives = 128/144 (88%)
 Frame = +1

Query: 1   KGFTCIMPWLAVAEINIPQFTEGQKIDISRIEVDEGNTQPPDYLTESDLISLMEKYGIGT 180
           KGFT IMPW AV E  +P F +G++I++ R+E+ EGNT PPDYLTES+LISLMEK+GIGT
Sbjct: 445 KGFTAIMPWSAVDEKKLPSFLKGERIEVIRVELYEGNTAPPDYLTESELISLMEKHGIGT 504

Query: 181 DASIPVHINNICERNYVQVQPGRRLVPTALGISLIRGYQCIDPDLCLPDIRGFIEHQITL 360
           DASIPVHINNI ERNYVQVQ GR+LVPTALGI+LIRGYQCIDPDLCLPDIR FIE QITL
Sbjct: 505 DASIPVHINNIGERNYVQVQAGRKLVPTALGITLIRGYQCIDPDLCLPDIRSFIEQQITL 564

Query: 361 VAKGQADHSLVVEHVIDQFKRKFT 432
           VAKGQADHS VV+HVI QF+RKF+
Sbjct: 565 VAKGQADHSHVVQHVIQQFRRKFS 588


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