BLASTX nr result

ID: Scutellaria24_contig00019871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00019871
         (632 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC49408.1| PRF [Solanum lycopersicum]                              96   7e-18
gb|AAF76312.1|AF220603_4 Prf [Solanum lycopersicum]                    96   7e-18
gb|AAF76308.1| Prf [Solanum pimpinellifolium]                          96   7e-18
gb|AEW48206.1| disease resistance protein RGH4 [Solanum fernande...    94   3e-17
gb|AEW48192.1| disease resistance protein RGH3 [Solanum chacoense]     93   4e-17

>gb|AAC49408.1| PRF [Solanum lycopersicum]
          Length = 1824

 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 50/111 (45%), Positives = 72/111 (64%), Gaps = 2/111 (1%)
 Frame = -2

Query: 571  WEKMSVIGGLPNLQVLKLLKNAFRGETWETKEDEFQELTFLKLEDLDLVEWNVGYSQHFR 392
            W ++S+I  LPNL +LKLL  AF G+ WE K+ EF EL +LKL++L +V+W++     F 
Sbjct: 1691 WTQISIIAELPNLVILKLLLRAFEGDHWEVKDSEFLELKYLKLDNLKVVQWSIS-DDAFP 1749

Query: 391  KLRQLVVIRCKNLHEIPSEMGEIVQL--IEVMDCTDSVAESAQQIEREQRD 245
            KL  LV+ +CK+L +IPS   + V L  +EV  C  +VA SAQ I+  Q +
Sbjct: 1750 KLEHLVLTKCKHLEKIPSRFEDAVCLNRVEVNWCNWNVANSAQDIQTMQHE 1800


>gb|AAF76312.1|AF220603_4 Prf [Solanum lycopersicum]
          Length = 1825

 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 50/111 (45%), Positives = 72/111 (64%), Gaps = 2/111 (1%)
 Frame = -2

Query: 571  WEKMSVIGGLPNLQVLKLLKNAFRGETWETKEDEFQELTFLKLEDLDLVEWNVGYSQHFR 392
            W ++S+I  LPNL +LKLL  AF G+ WE K+ EF EL +LKL++L +V+W++     F 
Sbjct: 1692 WTQISIIAELPNLVILKLLLRAFEGDHWEVKDSEFLELKYLKLDNLKVVQWSIS-DDAFP 1750

Query: 391  KLRQLVVIRCKNLHEIPSEMGEIVQL--IEVMDCTDSVAESAQQIEREQRD 245
            KL  LV+ +CK+L +IPS   + V L  +EV  C  +VA SAQ I+  Q +
Sbjct: 1751 KLEHLVLTKCKHLEKIPSRFEDAVCLNRVEVNWCNWNVANSAQDIQTMQHE 1801


>gb|AAF76308.1| Prf [Solanum pimpinellifolium]
          Length = 1824

 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 50/111 (45%), Positives = 72/111 (64%), Gaps = 2/111 (1%)
 Frame = -2

Query: 571  WEKMSVIGGLPNLQVLKLLKNAFRGETWETKEDEFQELTFLKLEDLDLVEWNVGYSQHFR 392
            W ++S+I  LPNL +LKLL  AF G+ WE K+ EF EL +LKL++L +V+W++     F 
Sbjct: 1691 WTQISIIAELPNLVILKLLLRAFEGDHWEVKDSEFLELKYLKLDNLKVVQWSIS-DDAFP 1749

Query: 391  KLRQLVVIRCKNLHEIPSEMGEIVQL--IEVMDCTDSVAESAQQIEREQRD 245
            KL  LV+ +CK+L +IPS   + V L  +EV  C  +VA SAQ I+  Q +
Sbjct: 1750 KLEHLVLTKCKHLEKIPSRFEDAVCLNRVEVNWCNWNVANSAQDIQTMQHE 1800


>gb|AEW48206.1| disease resistance protein RGH4 [Solanum fernandezianum]
          Length = 932

 Score = 93.6 bits (231), Expect = 3e-17
 Identities = 51/139 (36%), Positives = 78/139 (56%), Gaps = 2/139 (1%)
 Frame = -2

Query: 571  WEKMSVIGGLPNLQVLKLLKNAFRGETWETKEDEFQELTFLKLEDLDLVEWNVGYSQHFR 392
            W+ +S++G LP L+VLKL  NAF+GE WE  E+ F  L FL L+++ +  W    S HF 
Sbjct: 772  WKDLSIVGKLPKLEVLKLSGNAFKGEEWEVVEEGFPHLKFLFLDNVYIRYWRAS-SDHFP 830

Query: 391  KLRQLVVIRCKNLHEIPSEMGEI--VQLIEVMDCTDSVAESAQQIEREQRDNGNEELRVV 218
             L +L +  C  L  IP +  +I  + LI++ DC  SV  SA+QI+++ +DN    + V 
Sbjct: 831  YLERLFLRHCYYLDSIPRDFADITTLALIDISDCQQSVGNSAKQIQQDIQDNYGSSIEVY 890

Query: 217  APKTGSHDGPKPEKYSEDS 161
                 S +    +K  +DS
Sbjct: 891  TRDLFSFNSVTTDKDDDDS 909


>gb|AEW48192.1| disease resistance protein RGH3 [Solanum chacoense]
          Length = 932

 Score = 93.2 bits (230), Expect = 4e-17
 Identities = 54/151 (35%), Positives = 82/151 (54%), Gaps = 2/151 (1%)
 Frame = -2

Query: 571  WEKMSVIGGLPNLQVLKLLKNAFRGETWETKEDEFQELTFLKLEDLDLVEWNVGYSQHFR 392
            W+ +S++G LP L+VLKL  NAF GE WE  E+ F  L FL L++L +  W    S HF 
Sbjct: 782  WKDLSIVGKLPKLEVLKLSYNAFIGEEWEVVEEGFPHLKFLFLDNLYIRYWRAS-SDHFP 840

Query: 391  KLRQLVVIRCKNLHEIPSEMGEI--VQLIEVMDCTDSVAESAQQIEREQRDNGNEELRVV 218
             L +L +  C NL  IP +  +I  + LI++  C  SV  SA+QI+++ +DN    + V 
Sbjct: 841  YLERLFLRNCYNLDSIPRDFADITTLALIDIDYCQQSVGNSAKQIQQDIQDNYGSSIEVH 900

Query: 217  APKTGSHDGPKPEKYSEDSFRGLQRWIEFCR 125
                 S D    ++  +D F   ++ +  CR
Sbjct: 901  TRDLFSFDSMTTDEVDDDDF---EKEVASCR 928


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