BLASTX nr result

ID: Scutellaria24_contig00019394 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00019394
         (1353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38961.3| unnamed protein product [Vitis vinifera]              259   1e-66
ref|XP_002274515.2| PREDICTED: zinc finger CCCH domain-containin...   242   2e-61
ref|XP_004157135.1| PREDICTED: zinc finger CCCH domain-containin...   225   2e-56
ref|XP_004139162.1| PREDICTED: zinc finger CCCH domain-containin...   224   4e-56
ref|XP_002514479.1| nucleic acid binding protein, putative [Rici...   189   2e-45

>emb|CBI38961.3| unnamed protein product [Vitis vinifera]
          Length = 394

 Score =  259 bits (661), Expect = 1e-66
 Identities = 150/332 (45%), Positives = 189/332 (56%), Gaps = 28/332 (8%)
 Frame = +3

Query: 3    NTQSRGANDFGSKPNQFKPFENKWTRFSPINN-SGASASQRPDNKPQAAEHKCTDAETCK 179
            N+  +G +DFGSK N FKPFENKWTRFSP+   S +S+S++ DN+ Q A HKCTD E+CK
Sbjct: 65   NSLPKGTSDFGSKQNHFKPFENKWTRFSPLTTGSSSSSSRQSDNQVQPANHKCTDPESCK 124

Query: 180  RIIVEDLETEKPQWKLTCYGHSRYGPCDIVGDICYEELRSLAYDDAKNGKNLQLIVDRER 359
            R IVED E E+P WKLTCYGH +  PCDIVGDI YEELR  AYDDA  G +LQ IV+RER
Sbjct: 125  RQIVEDFEHERPIWKLTCYGHCKSAPCDIVGDISYEELRLAAYDDAGRGLSLQSIVERER 184

Query: 360  SLLNSKLIEFQNLIQKP---------SVVSSAPTHVPVS---HNGFSPQASTFGQLSGL- 500
            SLLNSKLIEF +L++KP         ++ S AP     S    N   P AS+F QLS   
Sbjct: 185  SLLNSKLIEFDSLLRKPYAAPPNSTLAIQSPAPNPDASSLTAQNNTPPSASSFSQLSTSP 244

Query: 501  ---LSTGSTAVSNYTFGQPSAFQNNSQPSNMFQTNNPPFNTSGAFGSQIPQQPLQSSYSF 671
                 T  +  SN  FGQ ++ Q +SQ S  F TNN  F  +G+FGSQ+P Q   S    
Sbjct: 245  NMGFGTRPSTPSNNAFGQSNSIQFSSQTSGAFGTNNLAFGNAGSFGSQLPVQMHGSPLPS 304

Query: 672  XXXXXXXXXXXXXXXXFATLANSSQTVNASEEQLNFFNSA-----------HQSVNNSQK 818
                            F+  A S Q ++ +  Q    +S            H  +   Q+
Sbjct: 305  NTAGFSHNNMSAGSKAFSPPAASPQIISFANNQSPILSSGTNSMFSAESTMHAQLEKMQR 364

Query: 819  EKTNADDSIWRKTEWKWNVGEIPEDAPPDVYI 914
            +  + D SIW K E  WN GEIPE+ PPD ++
Sbjct: 365  DNFSGDMSIWLKEE--WNPGEIPEEEPPDAFV 394


>ref|XP_002274515.2| PREDICTED: zinc finger CCCH domain-containing protein 16-like [Vitis
            vinifera]
          Length = 383

 Score =  242 bits (617), Expect = 2e-61
 Identities = 147/335 (43%), Positives = 186/335 (55%), Gaps = 31/335 (9%)
 Frame = +3

Query: 3    NTQSRGANDFGS--KPNQF-KPFENKWTRFSPINN-SGASASQRPDNKPQAAEHKCTDAE 170
            N Q + +N FG   + N   KPFENKWTRFSP+   S +S+S++ DN+ Q A HKCTD E
Sbjct: 51   NVQQQRSNPFGFGVQSNSLPKPFENKWTRFSPLTTGSSSSSSRQSDNQVQPANHKCTDPE 110

Query: 171  TCKRIIVEDLETEKPQWKLTCYGHSRYGPCDIVGDICYEELRSLAYDDAKNGKNLQLIVD 350
            +CKR IVED E E+P WKLTCYGH +  PCDIVGDI YEELR  AYDDA  G +LQ IV+
Sbjct: 111  SCKRQIVEDFEHERPIWKLTCYGHCKSAPCDIVGDISYEELRLAAYDDAGRGLSLQSIVE 170

Query: 351  RERSLLNSKLIEFQNLIQKP---------SVVSSAPTHVPVS---HNGFSPQASTFGQLS 494
            RERSLLNSKLIEF +L++KP         ++ S AP     S    N   P AS+F QLS
Sbjct: 171  RERSLLNSKLIEFDSLLRKPYAAPPNSTLAIQSPAPNPDASSLTAQNNTPPSASSFSQLS 230

Query: 495  GL----LSTGSTAVSNYTFGQPSAFQNNSQPSNMFQTNNPPFNTSGAFGSQIPQQPLQSS 662
                    T  +  SN  FGQ ++ Q +SQ S  F TNN  F  +G+FGSQ+P Q   S 
Sbjct: 231  TSPNMGFGTRPSTPSNNAFGQSNSIQFSSQTSGAFGTNNLAFGNAGSFGSQLPVQMHGSP 290

Query: 663  YSFXXXXXXXXXXXXXXXXFATLANSSQTVNASEEQLNFFNSA-----------HQSVNN 809
                               F+  A S Q ++ +  Q    +S            H  +  
Sbjct: 291  LPSNTAGFSHNNMSAGSKAFSPPAASPQIISFANNQSPILSSGTNSMFSAESTMHAQLEK 350

Query: 810  SQKEKTNADDSIWRKTEWKWNVGEIPEDAPPDVYI 914
             Q++  + D SIW K E  WN GEIPE+ PPD ++
Sbjct: 351  MQRDNFSGDMSIWLKEE--WNPGEIPEEEPPDAFV 383


>ref|XP_004157135.1| PREDICTED: zinc finger CCCH domain-containing protein 16-like
           [Cucumis sativus]
          Length = 360

 Score =  225 bits (573), Expect = 2e-56
 Identities = 137/322 (42%), Positives = 176/322 (54%), Gaps = 18/322 (5%)
 Frame = +3

Query: 3   NTQSRGANDFGSKPNQFKPFENKWTRFSPINNSGASASQRPDNKPQAAEHKCTDAETCKR 182
           N QS+   DFGSK NQ+KPFENKWTR  P   +G + S++PDN   ++ HKCTD E+CKR
Sbjct: 46  NGQSKAVADFGSKQNQYKPFENKWTR--PSTPAGNAQSRKPDNHLPSSNHKCTDGESCKR 103

Query: 183 IIVEDLETEKPQWKLTCYGHSRYGPCDIVGDICYEELRSLAYDDAKNGKNLQLIVDRERS 362
            I ED + E+P WKLTCYGH++  PCDIVGD+ YEELR++AYD+AK G +LQ IV+RER+
Sbjct: 104 QIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERERN 163

Query: 363 LLNSKLIEFQNLIQKPSVVSS--------------APTHVPVSHNGFSPQASTFGQLSGL 500
           LLNSKL EF+ L+ KP V  S              +P+ +P + N  +P  S+F QL   
Sbjct: 164 LLNSKLAEFEGLLLKPYVTPSNRAPGNQSSFSGTNSPSILPSAQNN-TPSLSSFSQLGAS 222

Query: 501 LSTGSTA----VSNYTFGQPSAFQNNSQPSNMFQTNNPPFNTSGAFGSQIPQQPLQSSYS 668
           L+TG  A      N  FGQ   F +  Q S+ F   N P  +  A G  +  Q   +  +
Sbjct: 223 LNTGFGARPSNPHNTVFGQQVQFSSPVQNSSGFGMTNFPSTSVVAVGGGVGSQTFGNFST 282

Query: 669 FXXXXXXXXXXXXXXXXFATLANSSQTVNASEEQLNFFNSAHQSVNNSQKEKTNADDSIW 848
                             A L N   T NA+           Q VN  Q+E ++ D  IW
Sbjct: 283 LSGFDIKNAGSNIFSS--AALTNLPPT-NANSSASGQIAPNAQLVNKLQQENSSVDVDIW 339

Query: 849 RKTEWKWNVGEIPEDAPPDVYI 914
            K   KW  GEIPE APPD  I
Sbjct: 340 MKE--KWVPGEIPEMAPPDAVI 359


>ref|XP_004139162.1| PREDICTED: zinc finger CCCH domain-containing protein 16-like
            [Cucumis sativus]
          Length = 377

 Score =  224 bits (571), Expect = 4e-56
 Identities = 137/322 (42%), Positives = 175/322 (54%), Gaps = 18/322 (5%)
 Frame = +3

Query: 3    NTQSRGANDFGSKPNQFKPFENKWTRFSPINNSGASASQRPDNKPQAAEHKCTDAETCKR 182
            N QS+   DFGSK NQ+KPFENKWTR  P   +G + S++PDN   ++ HKCTD E+CKR
Sbjct: 63   NGQSKAVADFGSKQNQYKPFENKWTR--PSTPTGNAQSRKPDNHLPSSNHKCTDGESCKR 120

Query: 183  IIVEDLETEKPQWKLTCYGHSRYGPCDIVGDICYEELRSLAYDDAKNGKNLQLIVDRERS 362
             I ED + E+P WKLTCYGH++  PCDIVGD+ YEELR++AYD+AK G +LQ IV+RER+
Sbjct: 121  QIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERERN 180

Query: 363  LLNSKLIEFQNLIQKPSVVSS--------------APTHVPVSHNGFSPQASTFGQLSGL 500
            LLNSKL EF+ L+ KP V  S              +P+ +P + N  +P  S+F QL   
Sbjct: 181  LLNSKLAEFEGLLLKPYVTPSNRAPGNQSSFSGTNSPSILPSAQNN-TPSLSSFSQLGAS 239

Query: 501  LSTGSTA----VSNYTFGQPSAFQNNSQPSNMFQTNNPPFNTSGAFGSQIPQQPLQSSYS 668
            L+TG  A      N  FGQ   F +  Q S+ F   N P  +  A G  +  Q   +  +
Sbjct: 240  LNTGFGARPSNPHNTVFGQQVQFSSPVQNSSGFGMTNFPSTSVVAVGGGVGSQTFGNFST 299

Query: 669  FXXXXXXXXXXXXXXXXFATLANSSQTVNASEEQLNFFNSAHQSVNNSQKEKTNADDSIW 848
                              A L N   T NA+           Q VN  Q E ++ D  IW
Sbjct: 300  LSGFDIKNAGSNIFSS--AALTNLPPT-NANSSASGQIAPNAQLVNKLQPENSSVDVDIW 356

Query: 849  RKTEWKWNVGEIPEDAPPDVYI 914
             K   KW  GEIPE APPD  I
Sbjct: 357  MKE--KWVPGEIPEMAPPDAVI 376


>ref|XP_002514479.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223546378|gb|EEF47879.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 282

 Score =  189 bits (479), Expect = 2e-45
 Identities = 97/183 (53%), Positives = 124/183 (67%), Gaps = 17/183 (9%)
 Frame = +3

Query: 9   QSRGANDFG---SKPNQFKPFENKWTRFSPINNSGASASQR-PDNKPQAAEHKCTDAETC 176
           Q++ ++ FG      +  KPFENKWTRFSPI+N+ A+ S R PDN+PQ A HKCTD ++C
Sbjct: 48  QNQSSSPFGFGTQSKSSTKPFENKWTRFSPISNAAATPSSRQPDNQPQPANHKCTDPDSC 107

Query: 177 KRIIVEDLETEKPQWKLTCYGHSRYGPCDIVGDICYEELRSLAYDDAKNGKNLQLIVDRE 356
           KR I ED + EKP WKLTCYGHS+ GPCDI GD+ YEELR+LAYD+AK+G  LQ IV+RE
Sbjct: 108 KRQIAEDFQNEKPLWKLTCYGHSKNGPCDIGGDVSYEELRALAYDEAKHGLTLQSIVERE 167

Query: 357 RSLLNSKLIEFQNLIQKP------SVVSSAP-------THVPVSHNGFSPQASTFGQLSG 497
           R+LL+SKLIEF+NL++ P      S  S +P         +P   N   P  S+F QL  
Sbjct: 168 RNLLSSKLIEFENLLRNPYAAPPKSAFSQSPFPGVTPNAILPSGQNNPPPSVSSFSQLGA 227

Query: 498 LLS 506
            L+
Sbjct: 228 SLN 230


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