BLASTX nr result

ID: Scutellaria24_contig00019382 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00019382
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139849.1| PREDICTED: F-box protein At-B-like [Cucumis ...    63   3e-08
ref|NP_001234642.1| uncharacterized protein LOC778198 [Solanum l...    60   1e-07
ref|XP_002265565.2| PREDICTED: F-box protein At-B-like [Vitis vi...    55   6e-06
emb|CBI39868.3| unnamed protein product [Vitis vinifera]               55   6e-06
emb|CAC36388.1| hypothetical protein [Capsella rubella]                55   8e-06

>ref|XP_004139849.1| PREDICTED: F-box protein At-B-like [Cucumis sativus]
           gi|449482753|ref|XP_004156393.1| PREDICTED: F-box
           protein At-B-like [Cucumis sativus]
          Length = 173

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 28/50 (56%), Positives = 35/50 (70%), Gaps = 2/50 (4%)
 Frame = +1

Query: 1   GLRWLGIGGTFLMKSANSGLLHG--RRAGLTVCSEGCEVGCHDGWQYHLS 144
           GL+WLGIG T L  + N  ++    +R  LT+C EGCEVGCHDGWQ+H S
Sbjct: 124 GLQWLGIGNTRLCSNGNVDMVELCLKRPWLTLCLEGCEVGCHDGWQFHRS 173


>ref|NP_001234642.1| uncharacterized protein LOC778198 [Solanum lycopersicum]
           gi|13620218|emb|CAC36396.1| hypothetical protein
           [Solanum lycopersicum] gi|13620225|emb|CAC36400.1|
           hypothetical protein [Solanum lycopersicum]
          Length = 607

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 26/47 (55%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
 Frame = +1

Query: 1   GLRWLGIGGTFLM-KSANSGLLHGRRAGLTVCSEGCEVGCHDGWQYH 138
           GLRWLG+GGT L+ K  +   +   R  L VC +GCE GCHDGWQ+H
Sbjct: 555 GLRWLGVGGTLLVNKRDDFSTICNVRPWLVVCFDGCEFGCHDGWQFH 601


>ref|XP_002265565.2| PREDICTED: F-box protein At-B-like [Vitis vinifera]
          Length = 619

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 23/45 (51%), Positives = 30/45 (66%)
 Frame = +1

Query: 4   LRWLGIGGTFLMKSANSGLLHGRRAGLTVCSEGCEVGCHDGWQYH 138
           L+W+G+G T L   AN  L    R  LT+C +GCE+GCHDGW +H
Sbjct: 570 LKWIGLGRTCLSGKANEIL--NERPWLTLCLDGCEMGCHDGWHFH 612


>emb|CBI39868.3| unnamed protein product [Vitis vinifera]
          Length = 607

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 23/45 (51%), Positives = 30/45 (66%)
 Frame = +1

Query: 4   LRWLGIGGTFLMKSANSGLLHGRRAGLTVCSEGCEVGCHDGWQYH 138
           L+W+G+G T L   AN  L    R  LT+C +GCE+GCHDGW +H
Sbjct: 558 LKWIGLGRTCLSGKANEIL--NERPWLTLCLDGCEMGCHDGWHFH 600


>emb|CAC36388.1| hypothetical protein [Capsella rubella]
          Length = 606

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 22/48 (45%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
 Frame = +1

Query: 1   GLRWLGIGGTFLM--KSANSGLLHGRRAGLTVCSEGCEVGCHDGWQYH 138
           GL WLG+G T +   K   +  + G+R  LT+C +GCE+GC+DGW++H
Sbjct: 554 GLHWLGLGQTRIAGRKETVTATICGQRPWLTLCFDGCELGCYDGWEFH 601


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