BLASTX nr result

ID: Scutellaria24_contig00019307 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00019307
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529115.1| uv excision repair protein rad23, putative [...   112   2e-23
ref|NP_001240201.1| uncharacterized protein LOC100809066 [Glycin...   112   4e-23
ref|XP_003555896.1| PREDICTED: putative DNA repair protein RAD23...   108   3e-22
ref|XP_003555895.1| PREDICTED: putative DNA repair protein RAD23...   108   3e-22
ref|XP_003536688.1| PREDICTED: putative DNA repair protein RAD23...   108   3e-22

>ref|XP_002529115.1| uv excision repair protein rad23, putative [Ricinus communis]
           gi|223531394|gb|EEF33228.1| uv excision repair protein
           rad23, putative [Ricinus communis]
          Length = 409

 Score =  112 bits (281), Expect = 2e-23
 Identities = 54/75 (72%), Positives = 66/75 (88%)
 Frame = -2

Query: 312 VADVKKMIETTQGADIYPAAQQMLVHQRKVLKDDTTLEENNVAEKSFVVIILSKNKASSG 133
           +ADVKK IETTQGAD+YPA QQML++Q KVLKD+TT++EN VAE SFVVI+L+KNK+S+G
Sbjct: 23  IADVKKSIETTQGADVYPAGQQMLIYQGKVLKDNTTIDENKVAENSFVVIMLTKNKSSTG 82

Query: 132 EGSRTSSAPTVKAPQ 88
           EGS  S+A T KAPQ
Sbjct: 83  EGSTASTASTTKAPQ 97


>ref|NP_001240201.1| uncharacterized protein LOC100809066 [Glycine max]
           gi|255644546|gb|ACU22776.1| unknown [Glycine max]
          Length = 392

 Score =  112 bits (279), Expect = 4e-23
 Identities = 55/73 (75%), Positives = 65/73 (89%)
 Frame = -2

Query: 312 VADVKKMIETTQGADIYPAAQQMLVHQRKVLKDDTTLEENNVAEKSFVVIILSKNKASSG 133
           +++VKK IET QGAD+YPAAQQML+HQ KVLKD TTLEEN VAE SF+VI+LSK K+SSG
Sbjct: 23  LSEVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLEENKVAENSFIVIMLSKTKSSSG 82

Query: 132 EGSRTSSAPTVKA 94
           EGS TS+AP+VKA
Sbjct: 83  EGSTTSTAPSVKA 95


>ref|XP_003555896.1| PREDICTED: putative DNA repair protein RAD23-3-like isoform 2
           [Glycine max]
          Length = 399

 Score =  108 bits (271), Expect = 3e-22
 Identities = 53/75 (70%), Positives = 66/75 (88%)
 Frame = -2

Query: 312 VADVKKMIETTQGADIYPAAQQMLVHQRKVLKDDTTLEENNVAEKSFVVIILSKNKASSG 133
           V++VKK IET QGAD+YPAAQQML+HQ KVL+D TTLEEN VAE +F+VI+LSK+K++SG
Sbjct: 23  VSEVKKNIETVQGADVYPAAQQMLIHQGKVLRDATTLEENKVAENTFIVIMLSKSKSTSG 82

Query: 132 EGSRTSSAPTVKAPQ 88
           EGS TS+A + KAPQ
Sbjct: 83  EGSTTSTALSTKAPQ 97


>ref|XP_003555895.1| PREDICTED: putative DNA repair protein RAD23-3-like isoform 1
           [Glycine max]
          Length = 402

 Score =  108 bits (271), Expect = 3e-22
 Identities = 53/75 (70%), Positives = 66/75 (88%)
 Frame = -2

Query: 312 VADVKKMIETTQGADIYPAAQQMLVHQRKVLKDDTTLEENNVAEKSFVVIILSKNKASSG 133
           V++VKK IET QGAD+YPAAQQML+HQ KVL+D TTLEEN VAE +F+VI+LSK+K++SG
Sbjct: 23  VSEVKKNIETVQGADVYPAAQQMLIHQGKVLRDATTLEENKVAENTFIVIMLSKSKSTSG 82

Query: 132 EGSRTSSAPTVKAPQ 88
           EGS TS+A + KAPQ
Sbjct: 83  EGSTTSTALSTKAPQ 97


>ref|XP_003536688.1| PREDICTED: putative DNA repair protein RAD23-3-like [Glycine max]
          Length = 408

 Score =  108 bits (271), Expect = 3e-22
 Identities = 52/75 (69%), Positives = 65/75 (86%)
 Frame = -2

Query: 312 VADVKKMIETTQGADIYPAAQQMLVHQRKVLKDDTTLEENNVAEKSFVVIILSKNKASSG 133
           V++VKK IET QGAD+YPAAQQML+HQ KVL+D +TLEEN V E +F+VI+LSK+K+ SG
Sbjct: 23  VSEVKKNIETVQGADVYPAAQQMLIHQGKVLRDASTLEENKVVENTFIVIMLSKSKSPSG 82

Query: 132 EGSRTSSAPTVKAPQ 88
           EGS TS+AP+ KAPQ
Sbjct: 83  EGSTTSTAPSTKAPQ 97


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