BLASTX nr result

ID: Scutellaria24_contig00019228 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00019228
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003605075.1| Pre-mRNA-splicing factor ATP-dependent RNA h...   174   5e-42
ref|XP_002302733.1| predicted protein [Populus trichocarpa] gi|2...   174   7e-42
gb|AAG51287.1|AC027035_10 helicase, putative [Arabidopsis thaliana]   172   3e-41
ref|NP_174605.1| putative RNA helicase [Arabidopsis thaliana] gi...   172   3e-41
ref|NP_001048055.1| Os02g0736600 [Oryza sativa Japonica Group] g...   171   4e-41

>ref|XP_003605075.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 [Medicago
           truncatula] gi|355506130|gb|AES87272.1|
           Pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16 [Medicago truncatula]
          Length = 1331

 Score =  174 bits (442), Expect = 5e-42
 Identities = 87/99 (87%), Positives = 96/99 (96%)
 Frame = -3

Query: 354 NTRGGIIGVTQPRRVAVLATAKRVAFELGLRLGKEVGFQVRHDRRVGENCSIKFMTDGIL 175
           + R GIIGVTQPRRVAVLATAKRVA+ELG+RLGKEVGFQVR+D+++GENCSIKFMTDGIL
Sbjct: 320 HARSGIIGVTQPRRVAVLATAKRVAYELGVRLGKEVGFQVRYDKKIGENCSIKFMTDGIL 379

Query: 174 LREVQSDFLLKRYSVLILDEAHERSLNTDILIGMLSRVI 58
           LREVQ+D LL+RYSVLILDEAHERSLNTDILIGMLSRVI
Sbjct: 380 LREVQNDILLRRYSVLILDEAHERSLNTDILIGMLSRVI 418


>ref|XP_002302733.1| predicted protein [Populus trichocarpa] gi|222844459|gb|EEE82006.1|
           predicted protein [Populus trichocarpa]
          Length = 1130

 Score =  174 bits (441), Expect = 7e-42
 Identities = 85/97 (87%), Positives = 94/97 (96%)
 Frame = -3

Query: 348 RGGIIGVTQPRRVAVLATAKRVAFELGLRLGKEVGFQVRHDRRVGENCSIKFMTDGILLR 169
           R G+IGVTQPRR+AVLATA+RVAFELGL LGKEVGFQVRHD+R+G+NCSIKFMTDGILLR
Sbjct: 220 RNGVIGVTQPRRIAVLATARRVAFELGLHLGKEVGFQVRHDKRIGDNCSIKFMTDGILLR 279

Query: 168 EVQSDFLLKRYSVLILDEAHERSLNTDILIGMLSRVI 58
           EVQ+D LLKRYSV+ILDEAHERS+NTDILIGMLSRVI
Sbjct: 280 EVQTDILLKRYSVIILDEAHERSVNTDILIGMLSRVI 316


>gb|AAG51287.1|AC027035_10 helicase, putative [Arabidopsis thaliana]
          Length = 1191

 Score =  172 bits (435), Expect = 3e-41
 Identities = 84/99 (84%), Positives = 97/99 (97%)
 Frame = -3

Query: 354 NTRGGIIGVTQPRRVAVLATAKRVAFELGLRLGKEVGFQVRHDRRVGENCSIKFMTDGIL 175
           ++R GIIG+TQPRRVAVLATAKRVAFELG+RLGKEVGFQVR+D+++GEN SIKFMTDGIL
Sbjct: 243 SSRSGIIGITQPRRVAVLATAKRVAFELGVRLGKEVGFQVRYDKKIGENSSIKFMTDGIL 302

Query: 174 LREVQSDFLLKRYSVLILDEAHERSLNTDILIGMLSRVI 58
           LRE+Q+DFLL+RYSV+ILDEAHERSLNTDILIGML+RVI
Sbjct: 303 LREIQNDFLLRRYSVIILDEAHERSLNTDILIGMLTRVI 341


>ref|NP_174605.1| putative RNA helicase [Arabidopsis thaliana]
           gi|12322388|gb|AAG51220.1|AC051630_17 RNA helicase,
           putative; 27866-23496 [Arabidopsis thaliana]
           gi|332193467|gb|AEE31588.1| putative RNA helicase
           [Arabidopsis thaliana]
          Length = 1237

 Score =  172 bits (435), Expect = 3e-41
 Identities = 84/99 (84%), Positives = 97/99 (97%)
 Frame = -3

Query: 354 NTRGGIIGVTQPRRVAVLATAKRVAFELGLRLGKEVGFQVRHDRRVGENCSIKFMTDGIL 175
           ++R GIIG+TQPRRVAVLATAKRVAFELG+RLGKEVGFQVR+D+++GEN SIKFMTDGIL
Sbjct: 289 SSRSGIIGITQPRRVAVLATAKRVAFELGVRLGKEVGFQVRYDKKIGENSSIKFMTDGIL 348

Query: 174 LREVQSDFLLKRYSVLILDEAHERSLNTDILIGMLSRVI 58
           LRE+Q+DFLL+RYSV+ILDEAHERSLNTDILIGML+RVI
Sbjct: 349 LREIQNDFLLRRYSVIILDEAHERSLNTDILIGMLTRVI 387


>ref|NP_001048055.1| Os02g0736600 [Oryza sativa Japonica Group]
           gi|46390441|dbj|BAD15903.1| putative kurz protein [Oryza
           sativa Japonica Group] gi|113537586|dbj|BAF09969.1|
           Os02g0736600 [Oryza sativa Japonica Group]
           gi|215768291|dbj|BAH00520.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 1272

 Score =  171 bits (434), Expect = 4e-41
 Identities = 85/97 (87%), Positives = 93/97 (95%)
 Frame = -3

Query: 348 RGGIIGVTQPRRVAVLATAKRVAFELGLRLGKEVGFQVRHDRRVGENCSIKFMTDGILLR 169
           R GIIG+TQPRRVAVLATA+RV++ELGL+LGKEVGFQVRHD+ VG  CSIKFMTDGILLR
Sbjct: 290 RKGIIGITQPRRVAVLATARRVSYELGLKLGKEVGFQVRHDKMVGSKCSIKFMTDGILLR 349

Query: 168 EVQSDFLLKRYSVLILDEAHERSLNTDILIGMLSRVI 58
           EVQSDFLLKRYSV+ILDEAHERSLNTDILIGMLSR+I
Sbjct: 350 EVQSDFLLKRYSVIILDEAHERSLNTDILIGMLSRII 386


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