BLASTX nr result

ID: Scutellaria24_contig00019145 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00019145
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276985.1| PREDICTED: DDB1- and CUL4-associated factor ...   231   3e-59
ref|XP_003519367.1| PREDICTED: DDB1- and CUL4-associated factor ...   227   7e-58
ref|XP_003544166.1| PREDICTED: LOW QUALITY PROTEIN: DDB1- and CU...   226   1e-57
ref|XP_002517863.1| U3 small nucleolar RNA (U3 snorna) associate...   224   4e-57
ref|XP_002327907.1| predicted protein [Populus trichocarpa] gi|2...   223   1e-56

>ref|XP_002276985.1| PREDICTED: DDB1- and CUL4-associated factor 13 [Vitis vinifera]
           gi|302143337|emb|CBI21898.3| unnamed protein product
           [Vitis vinifera]
          Length = 452

 Score =  231 bits (590), Expect = 3e-59
 Identities = 103/138 (74%), Positives = 122/138 (88%)
 Frame = -2

Query: 414 DIRLWDLATRRTVCRFPGHQGAVRGLTVSSDGHVLVSCGTDSTVRLWNIPVSSLMESDDP 235
           DIRLWD+A+RRTVC+FPGHQGAVRGLT S+DG +LVSCGTD TVRLWN+PV+++ +SDD 
Sbjct: 90  DIRLWDIASRRTVCQFPGHQGAVRGLTASTDGRILVSCGTDCTVRLWNVPVATISDSDDS 149

Query: 234 SDNEGKALAVHVWKNAFWAVDHQCNSELFATASAQVDIWNHNRSQPVNSFEWGKDTVLSV 55
           SDN  K LAVHVWKNAFW VDHQ +  LFATA AQVDIW+HNRSQPVN+F+WG D+V++V
Sbjct: 150 SDNSMKPLAVHVWKNAFWGVDHQWDGNLFATAGAQVDIWDHNRSQPVNTFQWGNDSVIAV 209

Query: 54  RFNPAEPNMLATSASDRS 1
           RFNP EP++LA SASDRS
Sbjct: 210 RFNPGEPDILAASASDRS 227


>ref|XP_003519367.1| PREDICTED: DDB1- and CUL4-associated factor 13-like [Glycine max]
          Length = 452

 Score =  227 bits (579), Expect = 7e-58
 Identities = 101/138 (73%), Positives = 120/138 (86%)
 Frame = -2

Query: 414 DIRLWDLATRRTVCRFPGHQGAVRGLTVSSDGHVLVSCGTDSTVRLWNIPVSSLMESDDP 235
           DIRLWDLA RRTVC+FPGH+GAVRGLT S+DG +LVSCGTD T+RLW++P+++LMESDD 
Sbjct: 90  DIRLWDLAARRTVCQFPGHRGAVRGLTASTDGRILVSCGTDCTIRLWSVPITTLMESDDS 149

Query: 234 SDNEGKALAVHVWKNAFWAVDHQCNSELFATASAQVDIWNHNRSQPVNSFEWGKDTVLSV 55
           + +  +  +V+VWKNAFW  DHQ + E FATA AQVDIWNHNRSQP+NSFEWG DTV+SV
Sbjct: 150 TKSTVEPASVYVWKNAFWGADHQWDGEHFATAGAQVDIWNHNRSQPINSFEWGSDTVISV 209

Query: 54  RFNPAEPNMLATSASDRS 1
           RFNP EPN+LATSASDRS
Sbjct: 210 RFNPGEPNLLATSASDRS 227


>ref|XP_003544166.1| PREDICTED: LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor
           13-like [Glycine max]
          Length = 452

 Score =  226 bits (576), Expect = 1e-57
 Identities = 101/138 (73%), Positives = 119/138 (86%)
 Frame = -2

Query: 414 DIRLWDLATRRTVCRFPGHQGAVRGLTVSSDGHVLVSCGTDSTVRLWNIPVSSLMESDDP 235
           DIRLWDLA RR VC+FPGH+GAVRGLT S+DGH+LVSCGTD T+RLW++P ++LMESDD 
Sbjct: 90  DIRLWDLAARRIVCQFPGHRGAVRGLTASTDGHILVSCGTDCTIRLWSVPXTTLMESDDS 149

Query: 234 SDNEGKALAVHVWKNAFWAVDHQCNSELFATASAQVDIWNHNRSQPVNSFEWGKDTVLSV 55
           + +  +  +V+VWKNAFW  DHQ + E FATA AQVDIWNHNRSQP+NSFEWG DTV+SV
Sbjct: 150 TKSTVEPASVYVWKNAFWGADHQWDGEHFATAGAQVDIWNHNRSQPINSFEWGTDTVISV 209

Query: 54  RFNPAEPNMLATSASDRS 1
           RFNP EPN+LATSASDRS
Sbjct: 210 RFNPGEPNLLATSASDRS 227


>ref|XP_002517863.1| U3 small nucleolar RNA (U3 snorna) associated protein, putative
           [Ricinus communis] gi|223542845|gb|EEF44381.1| U3 small
           nucleolar RNA (U3 snorna) associated protein, putative
           [Ricinus communis]
          Length = 452

 Score =  224 bits (572), Expect = 4e-57
 Identities = 101/138 (73%), Positives = 118/138 (85%)
 Frame = -2

Query: 414 DIRLWDLATRRTVCRFPGHQGAVRGLTVSSDGHVLVSCGTDSTVRLWNIPVSSLMESDDP 235
           DIRLWD+A+RRTVC+FPGHQGAVRGLT S+DG +L+SCGTD T RLW +PV+++MESD P
Sbjct: 90  DIRLWDIASRRTVCQFPGHQGAVRGLTASTDGCILISCGTDCTARLWKVPVATMMESDGP 149

Query: 234 SDNEGKALAVHVWKNAFWAVDHQCNSELFATASAQVDIWNHNRSQPVNSFEWGKDTVLSV 55
           S+   +  A++V KNAFW VDHQ + ELFAT  AQVDIWNHNRSQPVNSFEWG DTV+SV
Sbjct: 150 SNRSAEPQAIYVGKNAFWGVDHQWDGELFATGGAQVDIWNHNRSQPVNSFEWGTDTVISV 209

Query: 54  RFNPAEPNMLATSASDRS 1
           RFNP EPN+LA SASDRS
Sbjct: 210 RFNPGEPNLLAASASDRS 227


>ref|XP_002327907.1| predicted protein [Populus trichocarpa] gi|222837316|gb|EEE75695.1|
           predicted protein [Populus trichocarpa]
          Length = 452

 Score =  223 bits (569), Expect = 1e-56
 Identities = 102/138 (73%), Positives = 120/138 (86%)
 Frame = -2

Query: 414 DIRLWDLATRRTVCRFPGHQGAVRGLTVSSDGHVLVSCGTDSTVRLWNIPVSSLMESDDP 235
           DIRLWD+A RRTVC+FPGHQGAVRGLT S+DG  LVSCGTD TVRLWN+PV+++M+SD+ 
Sbjct: 90  DIRLWDIANRRTVCQFPGHQGAVRGLTASTDGSTLVSCGTDCTVRLWNVPVATIMDSDNL 149

Query: 234 SDNEGKALAVHVWKNAFWAVDHQCNSELFATASAQVDIWNHNRSQPVNSFEWGKDTVLSV 55
           SD   +  AV++ +NAFWAVDHQ N +LFATA AQVDIWNHNRSQPVNSF+WG D+V+SV
Sbjct: 150 SDCSSEPRAVYMGENAFWAVDHQWNGDLFATAGAQVDIWNHNRSQPVNSFKWGTDSVISV 209

Query: 54  RFNPAEPNMLATSASDRS 1
           RFNP EPN+L TSASDRS
Sbjct: 210 RFNPGEPNLLVTSASDRS 227


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