BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00019128
         (1473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymeras...   499   e-139
sp|Q8L6J2.1|RPO2A_TOBAC RecName: Full=DNA-directed RNA polymeras...   499   e-139
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   498   e-138
sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymeras...   496   e-138
dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymer...   496   e-138

>sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial; AltName: Full=NsRpoT-B;
            AltName: Full=T7 bacteriophage-type single subunit RNA
            polymerase 2; Flags: Precursor
            gi|21425639|emb|CAC82575.2| phage-type RNA polymerase
            [Nicotiana sylvestris]
          Length = 1020

 Score =  499 bits (1286), Expect = e-139
 Identities = 242/297 (81%), Positives = 268/297 (90%)
 Frame = +1

Query: 1    CNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLNIMKEDAQKDPALFPEALHA 180
            CNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVL+IMK DAQ+DPA FP+A+ A
Sbjct: 724  CNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQRDPAEFPDAVRA 783

Query: 181  RRLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDAVGDDAEIFGGACYAAKITL 360
            R L+NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER A+ DD+E+FG ACYAAK+TL
Sbjct: 784  RVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVTL 843

Query: 361  TALGQMFEAARSIMSWLGECAKIIAAENEPVCWTTPLGLPVVQPYRKVGRHLIKTSLQVL 540
            TALG+MFEAARSIM+WLGECAKIIA+ENEPV WTTPLGLPVVQPYRK+GRHLIKTSLQ+L
Sbjct: 844  TALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHLIKTSLQIL 903

Query: 541  TLQRESDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACRKAGLTFAGVHDSYWTHACDVD 720
            TLQRE++KVMVKRQRTAFPPNF+HSLDGSHMMMTA+ACR+AGL FAGVHDSYWTHACDVD
Sbjct: 904  TLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVD 963

Query: 721  ELNWILREKFVELYEAPVLENXXXXXXXXXXXXXXXXXXDRGDFDLKEVLQSPYFFN 891
            +LN ILREKFVELYEAP+LE                   +RGDFD+++VL+SPYFFN
Sbjct: 964  KLNRILREKFVELYEAPILEKLLESFQTSYPTLLFPPLPERGDFDMRDVLESPYFFN 1020


>sp|Q8L6J2.1|RPO2A_TOBAC RecName: Full=DNA-directed RNA polymerase 2A; AltName:
           Full=NictaRpoT2-syl; AltName: Full=T7 bacteriophage-type
           single subunit RNA polymerase 2A
           gi|21425675|emb|CAC95025.1| mitochondrial and plastid
           RNA polymerase [Nicotiana tabacum]
          Length = 332

 Score =  499 bits (1286), Expect = e-139
 Identities = 242/297 (81%), Positives = 268/297 (90%)
 Frame = +1

Query: 1   CNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLNIMKEDAQKDPALFPEALHA 180
           CNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVL+IMK DAQ+DPA FP+A+ A
Sbjct: 36  CNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQRDPAEFPDAVRA 95

Query: 181 RRLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDAVGDDAEIFGGACYAAKITL 360
           R L+NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER A+ DD+E+FG ACYAAK+TL
Sbjct: 96  RVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVTL 155

Query: 361 TALGQMFEAARSIMSWLGECAKIIAAENEPVCWTTPLGLPVVQPYRKVGRHLIKTSLQVL 540
           TALG+MFEAARSIM+WLGECAKIIA+ENEPV WTTPLGLPVVQPYRK+GRHLIKTSLQ+L
Sbjct: 156 TALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHLIKTSLQIL 215

Query: 541 TLQRESDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACRKAGLTFAGVHDSYWTHACDVD 720
           TLQRE++KVMVKRQRTAFPPNF+HSLDGSHMMMTA+ACR+AGL FAGVHDSYWTHACDVD
Sbjct: 216 TLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVD 275

Query: 721 ELNWILREKFVELYEAPVLENXXXXXXXXXXXXXXXXXXDRGDFDLKEVLQSPYFFN 891
           +LN ILREKFVELYEAP+LE                   +RGDFD+++VL+SPYFFN
Sbjct: 276 KLNRILREKFVELYEAPILEKLLESFQTSYPTLLFPPLPERGDFDMRDVLESPYFFN 332


>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            [Vitis vinifera] gi|298204431|emb|CBI16911.3| unnamed
            protein product [Vitis vinifera]
          Length = 1035

 Score =  498 bits (1281), Expect = e-138
 Identities = 242/297 (81%), Positives = 267/297 (89%)
 Frame = +1

Query: 1    CNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLNIMKEDAQKDPALFPEALHA 180
            CNGLQHYAALGRD+LGA AVNLVAGEKPADVYSGIAARVL+IMK DA+KDPA+FP+AL A
Sbjct: 739  CNGLQHYAALGRDQLGATAVNLVAGEKPADVYSGIAARVLDIMKRDAEKDPAIFPDALRA 798

Query: 181  RRLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDAVGDDAEIFGGACYAAKITL 360
            R LINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER+A+ DD E+FG ACYAAKITL
Sbjct: 799  RILINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERNAIADDVELFGAACYAAKITL 858

Query: 361  TALGQMFEAARSIMSWLGECAKIIAAENEPVCWTTPLGLPVVQPYRKVGRHLIKTSLQVL 540
            TALG+MF+AARSIMSWLG+CAKIIA+EN+PV WTTPLGLPVVQPYRK+GRHLIKTSLQVL
Sbjct: 859  TALGEMFQAARSIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVL 918

Query: 541  TLQRESDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACRKAGLTFAGVHDSYWTHACDVD 720
            TLQRE++ +MVKRQRTAFPPNFVHSLDGSHMMMTAIAC+KAGL FAGVHDSYWTHACDVD
Sbjct: 919  TLQRETETIMVKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGLNFAGVHDSYWTHACDVD 978

Query: 721  ELNWILREKFVELYEAPVLENXXXXXXXXXXXXXXXXXXDRGDFDLKEVLQSPYFFN 891
            E+N +LREKFV+LYE P+LEN                  +RGDFDL+EVL+SPYFFN
Sbjct: 979  EMNRLLREKFVQLYETPILENLLESFQQSFPALEFPPLPERGDFDLREVLESPYFFN 1035


>sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial; AltName:
            Full=NictaRpoT2-tom; AltName: Full=T7 bacteriophage-type
            single subunit RNA polymerase 2B; Flags: Precursor
            gi|21425665|emb|CAC95020.1| mitochondrial and chloroplast
            RNA polymerase [Nicotiana tabacum]
          Length = 1021

 Score =  496 bits (1278), Expect = e-138
 Identities = 240/297 (80%), Positives = 267/297 (89%)
 Frame = +1

Query: 1    CNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLNIMKEDAQKDPALFPEALHA 180
            CNGLQHYAALGRD+LGAAAVNLVAGEKPADVYSGIAARVL+IMK DAQ+DPA FP+A+ A
Sbjct: 725  CNGLQHYAALGRDELGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQRDPAEFPDAVRA 784

Query: 181  RRLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDAVGDDAEIFGGACYAAKITL 360
            R L+NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER A+ DD+E+FG ACYAAK+TL
Sbjct: 785  RALVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVTL 844

Query: 361  TALGQMFEAARSIMSWLGECAKIIAAENEPVCWTTPLGLPVVQPYRKVGRHLIKTSLQVL 540
            TALG+MFEAARSIM+WLGECAKIIA+ENEPV WTTPLGLPVVQPYRK+GRHLIKTSLQ+L
Sbjct: 845  TALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHLIKTSLQIL 904

Query: 541  TLQRESDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACRKAGLTFAGVHDSYWTHACDVD 720
            TLQ+E++KVMVKRQRTAFPPNF+HSLDGSHMMMTA+ACR+AGL FAGVHDSYWTHACDVD
Sbjct: 905  TLQQETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVD 964

Query: 721  ELNWILREKFVELYEAPVLENXXXXXXXXXXXXXXXXXXDRGDFDLKEVLQSPYFFN 891
            +LN ILREKFVELYE P+LE                   +RGDFDL++VL+SPYFFN
Sbjct: 965  KLNRILREKFVELYETPILEKLLESFQTSYPTLLFPPLPERGDFDLRDVLESPYFFN 1021


>dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
            sylvestris] gi|17221595|dbj|BAB78465.1| T7
            bacteriophage-type single subunit RNA polymerase
            [Nicotiana sylvestris]
          Length = 1020

 Score =  496 bits (1278), Expect = e-138
 Identities = 240/297 (80%), Positives = 267/297 (89%)
 Frame = +1

Query: 1    CNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLNIMKEDAQKDPALFPEALHA 180
            CNGLQHYAALGRDKLGAAAVNLVAGEKPA+ YSGIAARVL+IMK DAQ+DPA FP+A+ A
Sbjct: 724  CNGLQHYAALGRDKLGAAAVNLVAGEKPAEAYSGIAARVLDIMKRDAQRDPAEFPDAVRA 783

Query: 181  RRLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERDAVGDDAEIFGGACYAAKITL 360
            R L+NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER A+ DD+E+FG ACYAAK+TL
Sbjct: 784  RVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVTL 843

Query: 361  TALGQMFEAARSIMSWLGECAKIIAAENEPVCWTTPLGLPVVQPYRKVGRHLIKTSLQVL 540
            TALG+MFEAARSIM+WLGECAKIIA+ENEPV WTTPLGLPVVQPYRK+GRHLIKTSLQ+L
Sbjct: 844  TALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHLIKTSLQIL 903

Query: 541  TLQRESDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACRKAGLTFAGVHDSYWTHACDVD 720
            TLQRE++KVMVKRQRTAFPPNF+HSLDGSHMMMTA+ACR+AGL FAGVHDSYWTHACDVD
Sbjct: 904  TLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVD 963

Query: 721  ELNWILREKFVELYEAPVLENXXXXXXXXXXXXXXXXXXDRGDFDLKEVLQSPYFFN 891
            +LN ILREKFVELYEAP+LE                   +RGDFD+++VL+SPYFFN
Sbjct: 964  KLNRILREKFVELYEAPILEKLLESFQTSYPTLLFPPLPERGDFDMRDVLESPYFFN 1020