BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00019126
         (575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003578657.1| PREDICTED: splicing factor U2af large subuni...    65   8e-09
emb|CBI14816.3| unnamed protein product [Vitis vinifera]               60   3e-07
gb|ABG22562.1| U2 snRNP auxilliary factor, large subunit, splici...    55   8e-06
ref|NP_001068330.1| Os11g0636900 [Oryza sativa Japonica Group] g...    55   8e-06

>ref|XP_003578657.1| PREDICTED: splicing factor U2af large subunit B-like [Brachypodium
           distachyon]
          Length = 534

 Score = 65.1 bits (157), Expect = 8e-09
 Identities = 37/99 (37%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
 Frame = +3

Query: 231 RDRRSDHHKEKANNSD-DKGFKRKEVNQDREKDRYQKQEEQTNARYHGGRSKNEHYGSRR 407
           R+R  D  +E+A   D + G++  + N+DR++  +Q+  E++  R H GRS +  Y   R
Sbjct: 51  RERDRDRGRERARYGDREMGYEHGDRNRDRDR-HHQEHRERSERREHRGRSDDHDYRRSR 109

Query: 408 SQESSRYYKHSGDREKHYRQKSPGRSDEKSHSKRTSGFD 524
           + ES R  +   DR+ H RQ+S  RS  ++ SKR SGFD
Sbjct: 110 NHESERRER---DRDGHRRQRSRSRSRSRAQSKRVSGFD 145


>emb|CBI14816.3| unnamed protein product [Vitis vinifera]
          Length = 144

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 31/100 (31%), Positives = 59/100 (59%)
 Frame = +3

Query: 216 PYNSSRDRRSDHHKEKANNSDDKGFKRKEVNQDREKDRYQKQEEQTNARYHGGRSKNEHY 395
           PY++  +R S HHK  +   D +  + +E ++DR  +R+ +  +  + R   GR K ++Y
Sbjct: 29  PYDAFEERDS-HHKHNSRELDREKSRTRERDRDRN-NRHHRDYKDRSLRDDRGRGKYDNY 86

Query: 396 GSRRSQESSRYYKHSGDREKHYRQKSPGRSDEKSHSKRTS 515
              RS+++ R++ +S DRE+  RQ+S  RS ++S ++  S
Sbjct: 87  DHHRSRDNDRHHDYSRDRERRQRQRSRSRSKDRSRNRSKS 126


>gb|ABG22562.1| U2 snRNP auxilliary factor, large subunit, splicing factor family
           protein, expressed [Oryza sativa Japonica Group]
          Length = 550

 Score = 55.1 bits (131), Expect = 8e-06
 Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 12/110 (10%)
 Frame = +3

Query: 231 RDRRSDHHKEKANNSDDKGFKRKEVNQDREKDRYQKQEEQTNARYHGGRSKNEHYGSRRS 410
           R+R  D  KE+  + D     R   ++DR++DR+++  +++  R H  R +++    RR 
Sbjct: 71  RERERDKDKERDRDRDRDRRDRDRGDKDRDRDRHREHRDRSERREHHDRERSDDRDRRRG 130

Query: 411 QESSRYYKHSGDREKHYRQKSPGRSDEKSH------------SKRTSGFD 524
            +S R  +   DR+ H R +S  RS  K              SKR SGFD
Sbjct: 131 HDSER--RRDRDRDGHRRHRSRSRSPSKGRDRRSRSRSRSRSSKRVSGFD 178


>ref|NP_001068330.1| Os11g0636900 [Oryza sativa Japonica Group]
           gi|122248736|sp|Q2R0Q1.2|U2A2A_ORYSJ RecName:
           Full=Splicing factor U2af large subunit A; AltName:
           Full=U2 auxiliary factor 65 kDa subunit A; AltName:
           Full=U2 small nuclear ribonucleoprotein auxiliary factor
           large subunit A; Short=U2 snRNP auxiliary factor large
           subunit A gi|108864607|gb|ABA94914.2| U2 snRNP
           auxilliary factor, large subunit, splicing factor family
           protein, expressed [Oryza sativa Japonica Group]
           gi|113645552|dbj|BAF28693.1| Os11g0636900 [Oryza sativa
           Japonica Group] gi|222616290|gb|EEE52422.1| hypothetical
           protein OsJ_34542 [Oryza sativa Japonica Group]
          Length = 574

 Score = 55.1 bits (131), Expect = 8e-06
 Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 12/110 (10%)
 Frame = +3

Query: 231 RDRRSDHHKEKANNSDDKGFKRKEVNQDREKDRYQKQEEQTNARYHGGRSKNEHYGSRRS 410
           R+R  D  KE+  + D     R   ++DR++DR+++  +++  R H  R +++    RR 
Sbjct: 71  RERERDKDKERDRDRDRDRRDRDRGDKDRDRDRHREHRDRSERREHHDRERSDDRDRRRG 130

Query: 411 QESSRYYKHSGDREKHYRQKSPGRSDEKSH------------SKRTSGFD 524
            +S R  +   DR+ H R +S  RS  K              SKR SGFD
Sbjct: 131 HDSER--RRDRDRDGHRRHRSRSRSPSKGRDRRSRSRSRSRSSKRVSGFD 178