BLASTX nr result

ID: Scutellaria24_contig00018864 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00018864
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537709.1| PREDICTED: upstream activation factor subuni...   125   3e-27
ref|XP_003517103.1| PREDICTED: upstream activation factor subuni...   124   8e-27
ref|XP_002270166.1| PREDICTED: upstream activation factor subuni...   121   7e-26
ref|NP_566210.1| SWIB/MDM2 domain-containing protein [Arabidopsi...   115   4e-24
gb|AAM65610.1| unknown [Arabidopsis thaliana]                         115   4e-24

>ref|XP_003537709.1| PREDICTED: upstream activation factor subunit UAF30-like [Glycine
           max]
          Length = 132

 Score =  125 bits (315), Expect = 3e-27
 Identities = 60/84 (71%), Positives = 71/84 (84%)
 Frame = -2

Query: 408 TNSGITKSIPVSLALQNFVGAPEVSRVEAVKKVWAYIKENDLQNPLDKREIFCDAKLKKI 229
           TNSGI K +PVS  L +F+GAP+VSR +AVKKVWAYIK  +LQNP +K+EIFCD KLK I
Sbjct: 49  TNSGIQKVVPVSSELGDFLGAPQVSRTDAVKKVWAYIKLQNLQNPANKKEIFCDEKLKTI 108

Query: 228 FDGKDKVGFLEIAKLLSPHFIKTG 157
           F+GKDKVGF EIAKLLS HF+K+G
Sbjct: 109 FEGKDKVGFTEIAKLLSSHFVKSG 132


>ref|XP_003517103.1| PREDICTED: upstream activation factor subunit UAF30-like [Glycine
           max]
          Length = 132

 Score =  124 bits (311), Expect = 8e-27
 Identities = 60/83 (72%), Positives = 70/83 (84%)
 Frame = -2

Query: 408 TNSGITKSIPVSLALQNFVGAPEVSRVEAVKKVWAYIKENDLQNPLDKREIFCDAKLKKI 229
           TNSGI K +PVS  L +F+GAP+VSR EAVKKVWAYIK  +LQNP +K+EIFCD KLK I
Sbjct: 49  TNSGIQKVVPVSSELGDFLGAPQVSRTEAVKKVWAYIKLQNLQNPANKKEIFCDEKLKTI 108

Query: 228 FDGKDKVGFLEIAKLLSPHFIKT 160
           F+GKDKVGF EIAKLLS HF+K+
Sbjct: 109 FEGKDKVGFTEIAKLLSNHFVKS 131


>ref|XP_002270166.1| PREDICTED: upstream activation factor subunit spp27 [Vitis
           vinifera] gi|147798865|emb|CAN68050.1| hypothetical
           protein VITISV_015104 [Vitis vinifera]
           gi|296090194|emb|CBI40013.3| unnamed protein product
           [Vitis vinifera]
          Length = 128

 Score =  121 bits (303), Expect = 7e-26
 Identities = 57/82 (69%), Positives = 67/82 (81%)
 Frame = -2

Query: 405 NSGITKSIPVSLALQNFVGAPEVSRVEAVKKVWAYIKENDLQNPLDKREIFCDAKLKKIF 226
           + GITK +PVS AL+ F+G PE SR EAVKK+W +IK N+LQNP +KREI CD KLK +F
Sbjct: 46  SGGITKPVPVSPALRKFLGVPEASRAEAVKKIWEHIKLNNLQNPTNKREILCDEKLKSVF 105

Query: 225 DGKDKVGFLEIAKLLSPHFIKT 160
           +GKDKVGFLEI KLLS HFIKT
Sbjct: 106 EGKDKVGFLEIGKLLSHHFIKT 127


>ref|NP_566210.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
           gi|6091763|gb|AAF03473.1|AC009327_12 hypothetical
           protein [Arabidopsis thaliana]
           gi|26450613|dbj|BAC42418.1| unknown protein [Arabidopsis
           thaliana] gi|28372894|gb|AAO39929.1| At3g03590
           [Arabidopsis thaliana] gi|332640439|gb|AEE73960.1|
           SWIB/MDM2 domain-containing protein [Arabidopsis
           thaliana]
          Length = 143

 Score =  115 bits (288), Expect = 4e-24
 Identities = 54/82 (65%), Positives = 64/82 (78%)
 Frame = -2

Query: 405 NSGITKSIPVSLALQNFVGAPEVSRVEAVKKVWAYIKENDLQNPLDKREIFCDAKLKKIF 226
           ++GI K  PVS  L  F+G  E SR +A+K +W YIK +DLQNP DKREIFCD  LK IF
Sbjct: 61  STGIFKVTPVSPVLAQFLGTGETSRTDAIKGIWTYIKSHDLQNPADKREIFCDETLKLIF 120

Query: 225 DGKDKVGFLEIAKLLSPHFIKT 160
           +GKDKVGFLEI+KLLSPHF+KT
Sbjct: 121 EGKDKVGFLEISKLLSPHFVKT 142


>gb|AAM65610.1| unknown [Arabidopsis thaliana]
          Length = 143

 Score =  115 bits (288), Expect = 4e-24
 Identities = 54/82 (65%), Positives = 64/82 (78%)
 Frame = -2

Query: 405 NSGITKSIPVSLALQNFVGAPEVSRVEAVKKVWAYIKENDLQNPLDKREIFCDAKLKKIF 226
           ++GI K  PVS  L  F+G  E SR +A+K +W YIK +DLQNP DKREIFCD  LK IF
Sbjct: 61  STGIFKVTPVSPVLAQFLGTGETSRTDAIKGIWTYIKSHDLQNPADKREIFCDETLKLIF 120

Query: 225 DGKDKVGFLEIAKLLSPHFIKT 160
           +GKDKVGFLEI+KLLSPHF+KT
Sbjct: 121 EGKDKVGFLEISKLLSPHFVKT 142


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