BLASTX nr result

ID: Scutellaria24_contig00018736 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00018736
         (823 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276972.2| PREDICTED: probable DEAD-box ATP-dependent R...   112   1e-22
ref|XP_002509758.1| dead box ATP-dependent RNA helicase, putativ...   107   2e-21
ref|XP_002304481.1| predicted protein [Populus trichocarpa] gi|2...   103   6e-20
ref|XP_002298050.1| predicted protein [Populus trichocarpa] gi|2...   102   1e-19
ref|XP_004143987.1| PREDICTED: putative DEAD-box ATP-dependent R...   100   4e-19

>ref|XP_002276972.2| PREDICTED: probable DEAD-box ATP-dependent RNA helicase 48-like
           [Vitis vinifera] gi|297742558|emb|CBI34707.3| unnamed
           protein product [Vitis vinifera]
          Length = 754

 Score =  112 bits (279), Expect = 1e-22
 Identities = 65/110 (59%), Positives = 84/110 (76%), Gaps = 2/110 (1%)
 Frame = +2

Query: 113 ELQSKRKI--LNSSAALGKYDVKITKRRVPLEHLEDEIDLSQQIGAIRKEVIQRKSMQDE 286
           EL+ +R +  + SSAALGKYDVKI KRRV  + +++  D S+QI  IR E + RK++ +E
Sbjct: 215 ELRGRRNVQKMMSSAALGKYDVKI-KRRVMPKSIDEGDDFSEQIELIRHE-LSRKNLAEE 272

Query: 287 GKERDEDESILSAKRFDECNVSSLTVRALSEAGYVQLTRVQEATLSACLE 436
            +E+ ++ESILS KRFDEC VS LTV+ALS AGYVQ+TRVQEATL  CLE
Sbjct: 273 -EEKGDEESILSQKRFDECGVSPLTVKALSSAGYVQMTRVQEATLDVCLE 321


>ref|XP_002509758.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223549657|gb|EEF51145.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 771

 Score =  107 bits (268), Expect = 2e-21
 Identities = 61/106 (57%), Positives = 76/106 (71%), Gaps = 3/106 (2%)
 Frame = +2

Query: 128 RKILNSSAALGKYDVKITKRRVPLEHLEDEIDLSQQIGAIRKEVIQRKSMQDEGKER--- 298
           R+I+ S AALGKYDVKI+KR VPL+ LE+E D       IR E+  +  +    +E+   
Sbjct: 238 REIIGSRAALGKYDVKISKR-VPLKELEEETDFE----FIRYELENKMKLDRNDREKSEI 292

Query: 299 DEDESILSAKRFDECNVSSLTVRALSEAGYVQLTRVQEATLSACLE 436
           DE ESIL  +RFDEC +S LTV+AL+ AGYVQ+TRVQEATLSACLE
Sbjct: 293 DEQESILGQRRFDECGISPLTVKALTTAGYVQMTRVQEATLSACLE 338


>ref|XP_002304481.1| predicted protein [Populus trichocarpa] gi|222841913|gb|EEE79460.1|
           predicted protein [Populus trichocarpa]
          Length = 798

 Score =  103 bits (256), Expect = 6e-20
 Identities = 56/100 (56%), Positives = 74/100 (74%)
 Frame = +2

Query: 137 LNSSAALGKYDVKITKRRVPLEHLEDEIDLSQQIGAIRKEVIQRKSMQDEGKERDEDESI 316
           + S AALGKYD+K T RRVPL+ L D+ D + ++  IR E+ ++K       +++E++SI
Sbjct: 267 IGSRAALGKYDMKKT-RRVPLKEL-DKNDFANEVELIRYELGRKKKFAGNEGDKEEEDSI 324

Query: 317 LSAKRFDECNVSSLTVRALSEAGYVQLTRVQEATLSACLE 436
           LS KRFDEC +S LTV+AL  AGYVQ+TRVQEATLS CLE
Sbjct: 325 LSEKRFDECGLSPLTVKALIAAGYVQMTRVQEATLSVCLE 364


>ref|XP_002298050.1| predicted protein [Populus trichocarpa] gi|222845308|gb|EEE82855.1|
           predicted protein [Populus trichocarpa]
          Length = 784

 Score =  102 bits (254), Expect = 1e-19
 Identities = 57/110 (51%), Positives = 75/110 (68%)
 Frame = +2

Query: 107 GEELQSKRKILNSSAALGKYDVKITKRRVPLEHLEDEIDLSQQIGAIRKEVIQRKSMQDE 286
           GE      K + S  ALGKYDVK T RRVP + LE   D + ++  IR E+ ++K +   
Sbjct: 243 GERRGRSAKEIGSRDALGKYDVKKT-RRVPSKELEKN-DFANEVELIRYELGRKKKLAGN 300

Query: 287 GKERDEDESILSAKRFDECNVSSLTVRALSEAGYVQLTRVQEATLSACLE 436
             + ++++SILS KRFDEC +S LTV+AL+ AGYVQ+TRVQEATLS CLE
Sbjct: 301 DGDNEDEDSILSDKRFDECGLSPLTVKALTAAGYVQMTRVQEATLSVCLE 350


>ref|XP_004143987.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 33-like
           [Cucumis sativus] gi|449495891|ref|XP_004159976.1|
           PREDICTED: putative DEAD-box ATP-dependent RNA helicase
           33-like [Cucumis sativus]
          Length = 813

 Score =  100 bits (249), Expect = 4e-19
 Identities = 51/98 (52%), Positives = 77/98 (78%)
 Frame = +2

Query: 143 SSAALGKYDVKITKRRVPLEHLEDEIDLSQQIGAIRKEVIQRKSMQDEGKERDEDESILS 322
           SSA+LGK DV++ K+RVPL+  ++E D ++Q+  +R E+ ++ + ++EG++R+E   I +
Sbjct: 286 SSASLGKCDVRM-KKRVPLKPFDEESDFAEQVELLRYELSKKSAAEEEGEKREE--IIFT 342

Query: 323 AKRFDECNVSSLTVRALSEAGYVQLTRVQEATLSACLE 436
            KRFDEC +S LTV+ALS +GYV++TRVQEATLS CLE
Sbjct: 343 EKRFDECGISPLTVKALSFSGYVRMTRVQEATLSLCLE 380


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