BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00018694
         (903 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28010.3| unnamed protein product [Vitis vinifera]              305   7e-81
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme...   305   7e-81
ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polyme...   279   6e-73
ref|XP_002883963.1| RNA-dependent RNA polymerase family protein ...   276   4e-72
ref|NP_179583.3| RNA-dependent RNA polymerase-like protein [Arab...   268   1e-69

>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
          Length = 929

 Score =  305 bits (782), Expect = 7e-81
 Identities = 163/304 (53%), Positives = 212/304 (69%), Gaps = 4/304 (1%)
 Frame = +3

Query: 3    AYEMATGDFDGDNYWVSRNPELLKYFKANEPWKRVYSMPDSKKRNPGEFSDLDLERQLFK 182
            A EMA  DFDGD YWVSRN +LL+YF+A+EPW R  S      + P +FS  +LE +LF+
Sbjct: 626  ADEMANSDFDGDMYWVSRNQQLLQYFRASEPWMRKRSTRHVPSKRPTDFSPDELEHELFQ 685

Query: 183  LFMEAR-SPSSSMGIAADSWLTFMDRLLTLGDDRVMEKDSLKRKMIQLVDIYYDALDAPK 359
            LF+  R   SS++G+AAD+WL FMDRLLTL DD   EK+ LKRKM++L DIYYDALDAPK
Sbjct: 686  LFLTTRFQTSSAIGMAADNWLVFMDRLLTLRDDCSDEKECLKRKMLELTDIYYDALDAPK 745

Query: 360  SGKKVDVHEDLRAEMFPHHMEKGPDLSYHSSSILGQIYDRVLAFKDESVPKIEIWKLPYF 539
            SG KV+V ++L+AE FPH M  G + SYHS+SILGQIYD V +F+ E+    EIW+LP F
Sbjct: 746  SGMKVNVSKELKAEKFPHFM--GRESSYHSTSILGQIYDAVESFQPENQSTKEIWRLPLF 803

Query: 540  D-GSIPEK-YSVWRARYDNYRKDMTRALKSGDESKNEAANEVIQKYKQMLYEAPDMEESA 713
            +  ++P+     W+ RYD YR +M  AL+ G E+K+E A EVI KYKQ+LY A + EES 
Sbjct: 804  NIDAVPQACLRSWKDRYDQYRSEMAAALQHGGETKDEYAAEVINKYKQILYGAAEFEESP 863

Query: 714  KRTERIYEEAIAIYHVTYDYAMSYG-VEKCGFAWRVAGSALCNHYAWRLAGLKERPFLIS 890
            +  E I++EA+AIYHVTY++ ++   V  C F WRVAG ALC  Y  +L    E+  +  
Sbjct: 864  RNLEDIFDEALAIYHVTYEFVINGARVSYCNFPWRVAGRALCKLYTVKLG---EKSMVCV 920

Query: 891  PSVL 902
            PSVL
Sbjct: 921  PSVL 924


>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
            vinifera]
          Length = 943

 Score =  305 bits (782), Expect = 7e-81
 Identities = 163/304 (53%), Positives = 212/304 (69%), Gaps = 4/304 (1%)
 Frame = +3

Query: 3    AYEMATGDFDGDNYWVSRNPELLKYFKANEPWKRVYSMPDSKKRNPGEFSDLDLERQLFK 182
            A EMA  DFDGD YWVSRN +LL+YF+A+EPW R  S      + P +FS  +LE +LF+
Sbjct: 640  ADEMANSDFDGDMYWVSRNQQLLQYFRASEPWMRKRSTRHVPSKRPTDFSPDELEHELFQ 699

Query: 183  LFMEAR-SPSSSMGIAADSWLTFMDRLLTLGDDRVMEKDSLKRKMIQLVDIYYDALDAPK 359
            LF+  R   SS++G+AAD+WL FMDRLLTL DD   EK+ LKRKM++L DIYYDALDAPK
Sbjct: 700  LFLTTRFQTSSAIGMAADNWLVFMDRLLTLRDDCSDEKECLKRKMLELTDIYYDALDAPK 759

Query: 360  SGKKVDVHEDLRAEMFPHHMEKGPDLSYHSSSILGQIYDRVLAFKDESVPKIEIWKLPYF 539
            SG KV+V ++L+AE FPH M  G + SYHS+SILGQIYD V +F+ E+    EIW+LP F
Sbjct: 760  SGMKVNVSKELKAEKFPHFM--GRESSYHSTSILGQIYDAVESFQPENQSTKEIWRLPLF 817

Query: 540  D-GSIPEK-YSVWRARYDNYRKDMTRALKSGDESKNEAANEVIQKYKQMLYEAPDMEESA 713
            +  ++P+     W+ RYD YR +M  AL+ G E+K+E A EVI KYKQ+LY A + EES 
Sbjct: 818  NIDAVPQACLRSWKDRYDQYRSEMAAALQHGGETKDEYAAEVINKYKQILYGAAEFEESP 877

Query: 714  KRTERIYEEAIAIYHVTYDYAMSYG-VEKCGFAWRVAGSALCNHYAWRLAGLKERPFLIS 890
            +  E I++EA+AIYHVTY++ ++   V  C F WRVAG ALC  Y  +L    E+  +  
Sbjct: 878  RNLEDIFDEALAIYHVTYEFVINGARVSYCNFPWRVAGRALCKLYTVKLG---EKSMVCV 934

Query: 891  PSVL 902
            PSVL
Sbjct: 935  PSVL 938


>ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cucumis
            sativus]
          Length = 1056

 Score =  279 bits (714), Expect = 6e-73
 Identities = 149/303 (49%), Positives = 207/303 (68%), Gaps = 3/303 (0%)
 Frame = +3

Query: 3    AYEMATGDFDGDNYWVSRNPELLKYFKANEPWKRVYSMPDSKKRNPGEFSDLDLERQLFK 182
            A E+A GDFDGD YWVSRN +LL+YF+  EPW+   S      + P EFS  +LE +LFK
Sbjct: 754  ADEIAGGDFDGDMYWVSRNSQLLEYFRPCEPWRPSPSTEVVTNKKPKEFSADELENELFK 813

Query: 183  LFMEAR-SPSSSMGIAADSWLTFMDRLLTLGDDRVMEKDSLKRKMIQLVDIYYDALDAPK 359
            LF+  R  PS +  +AAD+WL  MD+ L LG++R  E++ ++ K++QL++IYYDALDAPK
Sbjct: 814  LFLSTRFQPSYAKSVAADNWLALMDQFLMLGEERKEERNCIRAKILQLINIYYDALDAPK 873

Query: 360  SG-KKVDVHEDLRAEMFPHHMEKGPDLSYHSSSILGQIYDRVLAFKDESVPKIEIWKLPY 536
             G KK++V + L+A   PH ME+G + SY S+SILGQI+D    +++E VP IE+ KLP 
Sbjct: 874  KGGKKIEVPKHLKAGTLPHFMERGKN-SYVSTSILGQIFDTANMYQEE-VPNIEVQKLPC 931

Query: 537  FDGSIPEK-YSVWRARYDNYRKDMTRALKSGDESKNEAANEVIQKYKQMLYEAPDMEESA 713
            F+  +PE  +  W+  Y+ YRKDM  A++   ++KN AA   I+KYK++LY A ++E S 
Sbjct: 932  FEEELPEYIFMKWKFLYELYRKDMVDAMQLDPDAKNIAAEATIKKYKEILYGAEELEGSP 991

Query: 714  KRTERIYEEAIAIYHVTYDYAMSYGVEKCGFAWRVAGSALCNHYAWRLAGLKERPFLISP 893
            +  E +Y+EA+AIY VTYD+AMS  V  CGFAW+VAGSAL   YA + +   ER F   P
Sbjct: 992  RSNEEVYQEALAIYQVTYDHAMSRSVRNCGFAWKVAGSALFKLYAIKHS---ERSFHCLP 1048

Query: 894  SVL 902
            SV+
Sbjct: 1049 SVM 1051


>ref|XP_002883963.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
            subsp. lyrata] gi|297329803|gb|EFH60222.1| RNA-dependent
            RNA polymerase family protein [Arabidopsis lyrata subsp.
            lyrata]
          Length = 981

 Score =  276 bits (707), Expect = 4e-72
 Identities = 149/305 (48%), Positives = 208/305 (68%), Gaps = 7/305 (2%)
 Frame = +3

Query: 9    EMATGDFDGDNYWVSRNPELLKYFKANEPWKRVYSMPDSKK---RNPGEFSDLDLERQLF 179
            E+A GDFDGD Y++SRNPELL++FK +EPW  V   P SK    R P + S  +LE +LF
Sbjct: 681  EIAGGDFDGDMYFISRNPELLEHFKPSEPW--VSLTPPSKSNSGRAPSQLSPEELEEELF 738

Query: 180  KLFMEARSPSSSM-GIAADSWLTFMDRLLTLGDDRVMEKDSLKRKMIQLVDIYYDALDAP 356
            ++F++A   +S++ GIAADSWLT MDRLL LGD+R  EK  +K+KM++L+DIYYDALDAP
Sbjct: 739  EMFLKAGFHASNVIGIAADSWLTIMDRLLILGDERAEEKAEMKKKMLKLIDIYYDALDAP 798

Query: 357  KSGKKVDVHEDLRAEMFPHHMEKGPDLSYHSSSILGQIYDRVLA-FKDESVPKIEIWKLP 533
            K G KV +  +LR ++FPH+ME+  +  + S+SILG IYD V +   +E  P  EI KLP
Sbjct: 799  KKGDKVYLPNELRPDIFPHYMER--EKKFKSTSILGLIYDFVKSQTTEEPTPSSEISKLP 856

Query: 534  YFDGSIPEKYSVWRAR--YDNYRKDMTRALKSGDESKNEAANEVIQKYKQMLYEAPDMEE 707
             F+     ++ + + R  YDNYR +MT+A+K+    K+E+ANEVIQ+YKQ  Y A   E+
Sbjct: 857  CFEDEPVSEFHMEKCRRWYDNYRSEMTQAMKT---DKDESANEVIQRYKQEFYGAAGFED 913

Query: 708  SAKRTERIYEEAIAIYHVTYDYAMSYGVEKCGFAWRVAGSALCNHYAWRLAGLKERPFLI 887
            S K  E +Y +A+ +Y + YDYA+  GV KCGF W+VAG  LC  Y   +  ++E+  + 
Sbjct: 914  SKKSLEELYPQALTLYKIVYDYAIHAGVSKCGFVWKVAGPVLCRFYL--MKKMQEKSLVC 971

Query: 888  SPSVL 902
            +PSVL
Sbjct: 972  APSVL 976


>ref|NP_179583.3| RNA-dependent RNA polymerase-like protein [Arabidopsis thaliana]
            gi|322967572|sp|O82188.2|RDR5_ARATH RecName:
            Full=Probable RNA-dependent RNA polymerase 5;
            Short=AtRDRP5; AltName: Full=RNA-directed RNA polymerase
            5 gi|330251850|gb|AEC06944.1| RNA-dependent RNA
            polymerase-like protein [Arabidopsis thaliana]
          Length = 977

 Score =  268 bits (686), Expect = 1e-69
 Identities = 148/305 (48%), Positives = 204/305 (66%), Gaps = 7/305 (2%)
 Frame = +3

Query: 9    EMATGDFDGDNYWVSRNPELLKYFKANEPWKRVYSMPDSKK---RNPGEFSDLDLERQLF 179
            E+A GDFDGD Y++SRNPELL+ FK +EPW  V   P SK    R P + S  +LE +LF
Sbjct: 677  EIAGGDFDGDMYFISRNPELLENFKPSEPW--VSLTPPSKSNSGRAPSQLSPEELEEELF 734

Query: 180  KLFMEARSPSSSM-GIAADSWLTFMDRLLTLGDDRVMEKDSLKRKMIQLVDIYYDALDAP 356
            ++F+ A   +S++ GIAADSWLT MDR L LGDDR  EK  +K+KM++L+DIYYDALDAP
Sbjct: 735  EMFLTAGFHASNVIGIAADSWLTIMDRFLILGDDRAEEKAEMKKKMLELIDIYYDALDAP 794

Query: 357  KSGKKVDVHEDLRAEMFPHHMEKGPDLSYHSSSILGQIYDRVLA-FKDESVPKIEIWKLP 533
            K G KV +   L+ ++FPH+ME+  D  + S+SILG I+D V +   +E  P  EI KLP
Sbjct: 795  KKGDKVYLPNKLKPDIFPHYMER--DKKFQSTSILGLIFDFVKSQTTEEPSPSSEISKLP 852

Query: 534  YFDGSIPEKYSVWRAR--YDNYRKDMTRALKSGDESKNEAANEVIQKYKQMLYEAPDMEE 707
             F+     ++ + + R  YDNYR +MT+A+K+    K+E+ANEVIQ+YKQ  Y A   E+
Sbjct: 853  CFEDEPVSEFHMQKCRLWYDNYRTEMTQAMKT---DKDESANEVIQRYKQEFYGAAGFED 909

Query: 708  SAKRTERIYEEAIAIYHVTYDYAMSYGVEKCGFAWRVAGSALCNHYAWRLAGLKERPFLI 887
            S K  E +Y +A+A+Y + YDYA+  GV KC F W+VAG  LC  Y  +   ++E+  + 
Sbjct: 910  SKKSLEELYPQALALYKIVYDYAIHAGVSKCRFVWKVAGPVLCRFYLNK--KMQEKCLVC 967

Query: 888  SPSVL 902
            +PSVL
Sbjct: 968  APSVL 972