BLASTX nr result

ID: Scutellaria24_contig00018623 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00018623
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002879480.1| nucleic acid binding protein [Arabidopsis ly...   171   4e-41
ref|NP_565781.1| Alba DNA/RNA-binding protein [Arabidopsis thali...   169   2e-40
ref|XP_002524472.1| conserved hypothetical protein [Ricinus comm...   167   8e-40
ref|NP_564325.1| Alba DNA/RNA-binding protein [Arabidopsis thali...   166   1e-39
ref|NP_001236789.1| uncharacterized protein LOC100305539 [Glycin...   166   1e-39

>ref|XP_002879480.1| nucleic acid binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297325319|gb|EFH55739.1| nucleic acid binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 130

 Score =  171 bits (434), Expect = 4e-41
 Identities = 86/102 (84%), Positives = 97/102 (95%)
 Frame = +3

Query: 87  MQEITDAVSNINIAGDSQKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIST 266
           M+EITD V+N+N+A DSQKKNRIQVSNTKKPLFFYVNLAKRYMQQ+N+VELSALGMAI+T
Sbjct: 1   MEEITDGVNNMNLAVDSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNDVELSALGMAIAT 60

Query: 267 VVSVAEILKNNRFAVEKKITTSTVEIRDDSRGRPISKAKIEI 392
           VV+VAEILKNN FAVEKKI TSTV+I+DDSRGRP+ KAKIEI
Sbjct: 61  VVTVAEILKNNGFAVEKKIMTSTVDIKDDSRGRPVQKAKIEI 102


>ref|NP_565781.1| Alba DNA/RNA-binding protein [Arabidopsis thaliana]
           gi|73921087|sp|O22969.1|Y2416_ARATH RecName:
           Full=Uncharacterized protein At2g34160
           gi|2342735|gb|AAB67633.1| expressed protein [Arabidopsis
           thaliana] gi|21536653|gb|AAM60985.1| unknown
           [Arabidopsis thaliana] gi|26450089|dbj|BAC42164.1|
           unknown protein [Arabidopsis thaliana]
           gi|111074476|gb|ABH04611.1| At2g34160 [Arabidopsis
           thaliana] gi|330253832|gb|AEC08926.1| Alba
           DNA/RNA-binding protein [Arabidopsis thaliana]
          Length = 130

 Score =  169 bits (428), Expect = 2e-40
 Identities = 84/102 (82%), Positives = 96/102 (94%)
 Frame = +3

Query: 87  MQEITDAVSNINIAGDSQKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIST 266
           M+EITD V+N+N+A DSQKKNRIQVSNTKKPLFFYVNLAKRYMQQ+N+VELSALGMAI+T
Sbjct: 1   MEEITDGVNNMNLATDSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNDVELSALGMAIAT 60

Query: 267 VVSVAEILKNNRFAVEKKITTSTVEIRDDSRGRPISKAKIEI 392
           VV+V EILKNN FAVEKKI TSTV+I+DD+RGRP+ KAKIEI
Sbjct: 61  VVTVTEILKNNGFAVEKKIMTSTVDIKDDARGRPVQKAKIEI 102


>ref|XP_002524472.1| conserved hypothetical protein [Ricinus communis]
           gi|223536260|gb|EEF37912.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 130

 Score =  167 bits (423), Expect = 8e-40
 Identities = 82/102 (80%), Positives = 95/102 (93%)
 Frame = +3

Query: 87  MQEITDAVSNINIAGDSQKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIST 266
           M+EIT+ V+NIN+AGD  KKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAI+T
Sbjct: 1   MEEITEGVNNINLAGDLHKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIAT 60

Query: 267 VVSVAEILKNNRFAVEKKITTSTVEIRDDSRGRPISKAKIEI 392
           VV+VAEILKNN  A+E+KI TSTV+++D+SRGRP+ KAKIEI
Sbjct: 61  VVTVAEILKNNGLAIERKIMTSTVDMKDESRGRPVQKAKIEI 102


>ref|NP_564325.1| Alba DNA/RNA-binding protein [Arabidopsis thaliana]
           gi|9502415|gb|AAF88114.1|AC021043_7 Unknown protein
           [Arabidopsis thaliana] gi|15529270|gb|AAK97729.1|
           At1g29250/F28N24_8 [Arabidopsis thaliana]
           gi|16974409|gb|AAL31130.1| At1g29250/F28N24_8
           [Arabidopsis thaliana] gi|21553922|gb|AAM63005.1|
           unknown [Arabidopsis thaliana]
           gi|332192944|gb|AEE31065.1| Alba DNA/RNA-binding protein
           [Arabidopsis thaliana]
          Length = 130

 Score =  166 bits (421), Expect = 1e-39
 Identities = 83/102 (81%), Positives = 96/102 (94%)
 Frame = +3

Query: 87  MQEITDAVSNINIAGDSQKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIST 266
           M+EIT+ V+N+N+A D+QKKNRIQVSNTKKPLFFYVNLAKRYMQQ+ +VELSALGMAI+T
Sbjct: 1   MEEITEGVNNMNLAVDTQKKNRIQVSNTKKPLFFYVNLAKRYMQQYTDVELSALGMAIAT 60

Query: 267 VVSVAEILKNNRFAVEKKITTSTVEIRDDSRGRPISKAKIEI 392
           VV+VAEILKNN FAVEKKI TSTV+I+DDSRGRP+ KAKIEI
Sbjct: 61  VVTVAEILKNNGFAVEKKIMTSTVDIKDDSRGRPVQKAKIEI 102


>ref|NP_001236789.1| uncharacterized protein LOC100305539 [Glycine max]
           gi|255625853|gb|ACU13271.1| unknown [Glycine max]
          Length = 144

 Score =  166 bits (421), Expect = 1e-39
 Identities = 85/102 (83%), Positives = 95/102 (93%)
 Frame = +3

Query: 87  MQEITDAVSNINIAGDSQKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIST 266
           M+ IT+ V+NINI+ DS KKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAI+T
Sbjct: 12  MEAITEGVNNINIS-DSYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIAT 70

Query: 267 VVSVAEILKNNRFAVEKKITTSTVEIRDDSRGRPISKAKIEI 392
           VV+VAEILKNN  A+EKKITTSTV+I+DDSRGRP+ KAKIEI
Sbjct: 71  VVTVAEILKNNELAIEKKITTSTVDIKDDSRGRPVQKAKIEI 112


Top