BLASTX nr result

ID: Scutellaria24_contig00018571 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00018571
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21472.3| unnamed protein product [Vitis vinifera]               89   4e-16
ref|XP_003525067.1| PREDICTED: probable ribosome biogenesis prot...    87   1e-15
ref|XP_004163491.1| PREDICTED: ribosome biogenesis protein TSR3 ...    86   2e-15
ref|XP_002276760.2| PREDICTED: probable ribosome biogenesis prot...    86   4e-15
ref|XP_004149142.1| PREDICTED: ribosome biogenesis protein TSR3 ...    84   9e-15

>emb|CBI21472.3| unnamed protein product [Vitis vinifera]
          Length = 326

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 50/80 (62%), Positives = 56/80 (70%), Gaps = 1/80 (1%)
 Frame = -1

Query: 237 MGHNNNQKQRRFK-KDNHRHVPAQQLHRDEDGGSLPTDPAANEEEEQRVPSIQLAMWDFG 61
           MGHN   K RRFK   +HR   ++      +  SLPTD A  EEEE  VP +QLAMWDFG
Sbjct: 1   MGHN---KARRFKGHQSHRGQSSRFQEPLREYDSLPTDQA--EEEELSVPKVQLAMWDFG 55

Query: 60  QCDAKRCTGRKLARFGLLKE 1
           QCDAKRCTGRKL+RFGLLKE
Sbjct: 56  QCDAKRCTGRKLSRFGLLKE 75


>ref|XP_003525067.1| PREDICTED: probable ribosome biogenesis protein C16orf42 homolog
           [Glycine max]
          Length = 271

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 42/81 (51%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
 Frame = -1

Query: 237 MGHNNNQKQRRFKKDNHRHVPAQQLHRDEDGGSLPTDPAANEEEEQRV--PSIQLAMWDF 64
           MG+N  ++ R  +  + RH   Q L  D+   SLP +    EEEE+ +  P I+LAMWDF
Sbjct: 1   MGNNRQRRFRAHRAQSSRHHQQQLLLEDDSQSSLPAENVEGEEEEEELTEPKIKLAMWDF 60

Query: 63  GQCDAKRCTGRKLARFGLLKE 1
           GQCDAKRCTGRKL+R G+LKE
Sbjct: 61  GQCDAKRCTGRKLSRLGMLKE 81


>ref|XP_004163491.1| PREDICTED: ribosome biogenesis protein TSR3 homolog [Cucumis
           sativus]
          Length = 265

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 52/81 (64%), Positives = 57/81 (70%), Gaps = 2/81 (2%)
 Frame = -1

Query: 237 MGHNNNQKQRRFKKDNHRHVPAQQLHR--DEDGGSLPTDPAANEEEEQRVPSIQLAMWDF 64
           M HN   K RRFK  + R   + + H+   ED   LP DPA NEEE  R P+IQLAMWDF
Sbjct: 1   MSHN---KTRRFKNHHPRRGQSTRGHKFIGEDE-CLPVDPA-NEEEPTR-PNIQLAMWDF 54

Query: 63  GQCDAKRCTGRKLARFGLLKE 1
           GQCDAKRCTGRKLARFGLLKE
Sbjct: 55  GQCDAKRCTGRKLARFGLLKE 75


>ref|XP_002276760.2| PREDICTED: probable ribosome biogenesis protein C16orf42 homolog
           [Vitis vinifera]
          Length = 302

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 50/89 (56%), Positives = 56/89 (62%), Gaps = 10/89 (11%)
 Frame = -1

Query: 237 MGHNNNQKQRRFK-KDNHRHVPAQQLHRDEDGGSLPTDPAAN---------EEEEQRVPS 88
           MGHN   K RRFK   +HR   ++      +  SLPTD  A          EEEE  VP 
Sbjct: 1   MGHN---KARRFKGHQSHRGQSSRFQEPLREYDSLPTDQVAMGFNFCAVAAEEEELSVPK 57

Query: 87  IQLAMWDFGQCDAKRCTGRKLARFGLLKE 1
           +QLAMWDFGQCDAKRCTGRKL+RFGLLKE
Sbjct: 58  VQLAMWDFGQCDAKRCTGRKLSRFGLLKE 86


>ref|XP_004149142.1| PREDICTED: ribosome biogenesis protein TSR3 homolog [Cucumis
           sativus]
          Length = 265

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 51/81 (62%), Positives = 56/81 (69%), Gaps = 2/81 (2%)
 Frame = -1

Query: 237 MGHNNNQKQRRFKKDNHRHVPAQQLHR--DEDGGSLPTDPAANEEEEQRVPSIQLAMWDF 64
           M HN   K RRFK  + R   + + H+   ED   LP DPA NEEE  R P+I LAMWDF
Sbjct: 1   MSHN---KTRRFKNHHPRRGQSTRGHKFIGEDE-CLPVDPA-NEEEPTR-PNIHLAMWDF 54

Query: 63  GQCDAKRCTGRKLARFGLLKE 1
           GQCDAKRCTGRKLARFGLLKE
Sbjct: 55  GQCDAKRCTGRKLARFGLLKE 75


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