BLASTX nr result

ID: Scutellaria24_contig00018499 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00018499
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19025.3| unnamed protein product [Vitis vinifera]               86   4e-15
dbj|BAK07622.1| predicted protein [Hordeum vulgare subsp. vulgare]     69   4e-10
ref|XP_003567314.1| PREDICTED: sister chromatid cohesion protein...    69   5e-10
ref|NP_001185421.1| sister chromatid cohesion protein PDS5 [Arab...    62   4e-08
ref|NP_001185420.1| sister chromatid cohesion protein PDS5 [Arab...    62   4e-08

>emb|CBI19025.3| unnamed protein product [Vitis vinifera]
          Length = 1450

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 41/87 (47%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
 Frame = +1

Query: 1    DQSPDIRRSFTTKIHKLLNNHSVPSRYACVFPFVALDSLEDLRTDALIYLKEFIGEYGKG 180
            D SP IRR F  K HKLL  H++PSRYAC F F   D  +DL+ D+L Y+ EF+ EY K 
Sbjct: 882  DPSPLIRRLFLDKTHKLLKEHAIPSRYACAFAFAGPDCPKDLQEDSLKYMAEFMKEYRKE 941

Query: 181  VQIHEATPME--ETANHPVYLVVFLIH 255
             Q+ + + M+     ++P Y+VVFL+H
Sbjct: 942  AQVRQTSVMQGGTITDYPAYMVVFLVH 968


>dbj|BAK07622.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1300

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
 Frame = +1

Query: 1    DQSPDIRRSFTTKIHKLLNNHSVPSRYACVFPFVALDSLEDLRTDALIYLKEFIGEYGKG 180
            D S  +R+SF  K+  LL  H +P RYAC F   + D   ++RT++L YL E + E  +G
Sbjct: 878  DSSYTVRKSFIHKLFGLLKKHEIPVRYACAFALASTDCAGEVRTESLRYLTEVLKEQ-RG 936

Query: 181  VQIHE-ATPMEETANHPVYLVVFLIH 255
            V +H+  T  +    HP Y V+FLIH
Sbjct: 937  VSVHQNKTSNDSIVEHPSYAVLFLIH 962


>ref|XP_003567314.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog A-like
            [Brachypodium distachyon]
          Length = 1399

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 34/86 (39%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
 Frame = +1

Query: 1    DQSPDIRRSFTTKIHKLLNNHSVPSRYACVFPFVALDSLEDLRTDALIYLKEFIGEYGKG 180
            D S  +R+SF  K+H LL  H++P +YAC F   + D   D+RT++  YL E + E  +G
Sbjct: 880  DSSYIVRKSFICKLHGLLKKHAIPVKYACAFALASTDYSGDVRTESHRYLTEVLKEQ-RG 938

Query: 181  VQIHEATPMEET-ANHPVYLVVFLIH 255
            + +H+ +  +++   HP Y VVFLIH
Sbjct: 939  LSVHQNSANKDSIVGHPSYAVVFLIH 964


>ref|NP_001185421.1| sister chromatid cohesion protein PDS5 [Arabidopsis thaliana]
            gi|332197878|gb|AEE35999.1| sister chromatid cohesion
            protein PDS5 [Arabidopsis thaliana]
          Length = 1424

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
 Frame = +1

Query: 1    DQSPDIRRSFTTKIHKLLNNHSVPSRYACVFPFVALDSLEDLRTDALIYLKEFIGEYGKG 180
            D +  I ++F TK++KLL  H +PSRYAC F F       DL  D+  Y+  FI +  + 
Sbjct: 926  DSNAFITKTFLTKLYKLLTEHMIPSRYACAFSFSLSSPCRDLHDDSFRYINGFINKATRE 985

Query: 181  VQ-IHEATPMEETANHPVYLVVFLIH 255
             +   +    E   + PVY+ VFLIH
Sbjct: 986  SRTCRDLDQGESLTDSPVYMTVFLIH 1011


>ref|NP_001185420.1| sister chromatid cohesion protein PDS5 [Arabidopsis thaliana]
            gi|332197877|gb|AEE35998.1| sister chromatid cohesion
            protein PDS5 [Arabidopsis thaliana]
          Length = 1410

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
 Frame = +1

Query: 1    DQSPDIRRSFTTKIHKLLNNHSVPSRYACVFPFVALDSLEDLRTDALIYLKEFIGEYGKG 180
            D +  I ++F TK++KLL  H +PSRYAC F F       DL  D+  Y+  FI +  + 
Sbjct: 912  DSNAFITKTFLTKLYKLLTEHMIPSRYACAFSFSLSSPCRDLHDDSFRYINGFINKATRE 971

Query: 181  VQ-IHEATPMEETANHPVYLVVFLIH 255
             +   +    E   + PVY+ VFLIH
Sbjct: 972  SRTCRDLDQGESLTDSPVYMTVFLIH 997


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