BLASTX nr result

ID: Scutellaria24_contig00018474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00018474
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273082.1| PREDICTED: sorting and assembly machinery co...    65   4e-09
emb|CAN84130.1| hypothetical protein VITISV_041873 [Vitis vinifera]    65   4e-09
ref|XP_004140074.1| PREDICTED: sorting and assembly machinery co...    64   2e-08
ref|XP_002528327.1| sorting and assembly machinery (sam50) prote...    63   3e-08
ref|XP_003600958.1| Sorting and assembly machinery component-lik...    60   1e-07

>ref|XP_002273082.1| PREDICTED: sorting and assembly machinery component 50 homolog
           B-like [Vitis vinifera]
          Length = 534

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 28/50 (56%), Positives = 43/50 (86%)
 Frame = -3

Query: 166 EARMRMERASMESLFNRLSTERVPVHVHDIIIKGNTKTKDSLIESEVEAV 17
           E+R+  + + +ES+F RL++E+V + VHD++IKGNTKTKDSLIE+E+EA+
Sbjct: 58  ESRLAEDGSKLESMFRRLASEKVKLRVHDVLIKGNTKTKDSLIEAELEAI 107


>emb|CAN84130.1| hypothetical protein VITISV_041873 [Vitis vinifera]
          Length = 564

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 28/50 (56%), Positives = 43/50 (86%)
 Frame = -3

Query: 166 EARMRMERASMESLFNRLSTERVPVHVHDIIIKGNTKTKDSLIESEVEAV 17
           E+R+  + + +ES+F RL++E+V + VHD++IKGNTKTKDSLIE+E+EA+
Sbjct: 58  ESRLAEDGSKLESMFRRLASEKVKLRVHDVLIKGNTKTKDSLIEAELEAI 107


>ref|XP_004140074.1| PREDICTED: sorting and assembly machinery component 50 homolog
           [Cucumis sativus] gi|449490420|ref|XP_004158600.1|
           PREDICTED: sorting and assembly machinery component 50
           homolog [Cucumis sativus]
          Length = 536

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 29/53 (54%), Positives = 42/53 (79%)
 Frame = -3

Query: 175 MTPEARMRMERASMESLFNRLSTERVPVHVHDIIIKGNTKTKDSLIESEVEAV 17
           +T  +R+  +R+ +E+L  R+  E+V + VHDI+IKGNTKTKDSLIE+EVEA+
Sbjct: 56  VTDASRLLAQRSKLENLVERMRKEKVRLRVHDILIKGNTKTKDSLIEAEVEAI 108


>ref|XP_002528327.1| sorting and assembly machinery (sam50) protein, putative [Ricinus
           communis] gi|223532282|gb|EEF34085.1| sorting and
           assembly machinery (sam50) protein, putative [Ricinus
           communis]
          Length = 518

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 29/55 (52%), Positives = 43/55 (78%)
 Frame = -3

Query: 166 EARMRMERASMESLFNRLSTERVPVHVHDIIIKGNTKTKDSLIESEVEAVLREAA 2
           E++ R+ER  +E+L  R+ TE VP+ VHD+IIKGN KTKDS++ESE  A+L++ +
Sbjct: 42  ESQARVEREKVENLIRRMQTETVPLRVHDVIIKGNVKTKDSILESET-ALLKDVS 95


>ref|XP_003600958.1| Sorting and assembly machinery component-like protein [Medicago
           truncatula] gi|355490006|gb|AES71209.1| Sorting and
           assembly machinery component-like protein [Medicago
           truncatula]
          Length = 516

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 26/52 (50%), Positives = 42/52 (80%)
 Frame = -3

Query: 172 TPEARMRMERASMESLFNRLSTERVPVHVHDIIIKGNTKTKDSLIESEVEAV 17
           +P +R+R ++  +E+L  RLS+E VP+ VHD+II+GNTKTKD +IE+E++ +
Sbjct: 37  SPLSRLRDQKFKLETLSRRLSSELVPIRVHDVIIRGNTKTKDWVIEAELKGI 88


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