BLASTX nr result

ID: Scutellaria24_contig00018322 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00018322
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282918.2| PREDICTED: CHD3-type chromatin-remodeling fa...   184   5e-45
emb|CBI21082.3| unnamed protein product [Vitis vinifera]              184   5e-45
ref|XP_002309665.1| chromatin remodeling complex subunit [Populu...   172   2e-41
ref|XP_002515445.1| chromodomain helicase DNA binding protein, p...   172   3e-41
ref|XP_002324903.1| chromatin remodeling complex subunit [Populu...   170   1e-40

>ref|XP_002282918.2| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like [Vitis
            vinifera]
          Length = 1472

 Score =  184 bits (468), Expect = 5e-45
 Identities = 89/124 (71%), Positives = 100/124 (80%)
 Frame = +2

Query: 2    IIRYGSKELFADDNDESVKSRQIHYDDAAIDRLLNREHIGXXXXXXXXXXXXGFLKAFKV 181
            IIRYGSKELFAD+NDE+ KSRQIHYDDAAIDRLL+RE +G            GFLKAFKV
Sbjct: 773  IIRYGSKELFADENDEAGKSRQIHYDDAAIDRLLDREQVGDEEATLDDDEDDGFLKAFKV 832

Query: 182  ANFEYVDEAELAAEEETPMPPVENRASANNSERATYWEDLLRDKYEVHKIEEFNAMGKGK 361
            ANFEY+DE E   EEE    PVEN+A+ NNSER +YWE+LLRD+YEVHKIEEFNA+GKGK
Sbjct: 833  ANFEYIDEVEAVVEEEVQKAPVENKAAVNNSERTSYWEELLRDRYEVHKIEEFNALGKGK 892

Query: 362  RSRK 373
            RSRK
Sbjct: 893  RSRK 896


>emb|CBI21082.3| unnamed protein product [Vitis vinifera]
          Length = 1356

 Score =  184 bits (468), Expect = 5e-45
 Identities = 89/124 (71%), Positives = 100/124 (80%)
 Frame = +2

Query: 2    IIRYGSKELFADDNDESVKSRQIHYDDAAIDRLLNREHIGXXXXXXXXXXXXGFLKAFKV 181
            IIRYGSKELFAD+NDE+ KSRQIHYDDAAIDRLL+RE +G            GFLKAFKV
Sbjct: 773  IIRYGSKELFADENDEAGKSRQIHYDDAAIDRLLDREQVGDEEATLDDDEDDGFLKAFKV 832

Query: 182  ANFEYVDEAELAAEEETPMPPVENRASANNSERATYWEDLLRDKYEVHKIEEFNAMGKGK 361
            ANFEY+DE E   EEE    PVEN+A+ NNSER +YWE+LLRD+YEVHKIEEFNA+GKGK
Sbjct: 833  ANFEYIDEVEAVVEEEVQKAPVENKAAVNNSERTSYWEELLRDRYEVHKIEEFNALGKGK 892

Query: 362  RSRK 373
            RSRK
Sbjct: 893  RSRK 896


>ref|XP_002309665.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222855641|gb|EEE93188.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 1340

 Score =  172 bits (437), Expect = 2e-41
 Identities = 86/127 (67%), Positives = 99/127 (77%), Gaps = 3/127 (2%)
 Frame = +2

Query: 2    IIRYGSKELFADDNDESVKSRQIHYDDAAIDRLLNREHIGXXXXXXXXXXXXGFLKAFKV 181
            IIRYGSKELFAD+NDE+ KSRQIHYDDAAIDRLL+RE +G            GFLKAFKV
Sbjct: 778  IIRYGSKELFADENDEAGKSRQIHYDDAAIDRLLDREQVGDEETSLDDEEEDGFLKAFKV 837

Query: 182  ANFEYVDEAELAAEEETPMPPVENRASANNSER---ATYWEDLLRDKYEVHKIEEFNAMG 352
            ANFEY+DEAE AAEEE     +E R++ NNSER     +WE+LL+D YEVHK+EEFNA+G
Sbjct: 838  ANFEYIDEAEAAAEEEAQKAAMETRSTINNSERTEKTNFWEELLKDSYEVHKVEEFNALG 897

Query: 353  KGKRSRK 373
            KGKRSRK
Sbjct: 898  KGKRSRK 904


>ref|XP_002515445.1| chromodomain helicase DNA binding protein, putative [Ricinus
            communis] gi|223545389|gb|EEF46894.1| chromodomain
            helicase DNA binding protein, putative [Ricinus communis]
          Length = 1470

 Score =  172 bits (435), Expect = 3e-41
 Identities = 82/124 (66%), Positives = 97/124 (78%)
 Frame = +2

Query: 2    IIRYGSKELFADDNDESVKSRQIHYDDAAIDRLLNREHIGXXXXXXXXXXXXGFLKAFKV 181
            IIRYGSKELFAD+NDE+ KSRQIHYDD AIDRLL+RE +G            GFLKAFKV
Sbjct: 770  IIRYGSKELFADENDEAGKSRQIHYDDTAIDRLLDREQVGEEEASVDDEEEDGFLKAFKV 829

Query: 182  ANFEYVDEAELAAEEETPMPPVENRASANNSERATYWEDLLRDKYEVHKIEEFNAMGKGK 361
            ANFEY+DE + AAEE       E +++ NNSER+ YWE+LL+D+YEVHK+EEFNA+GKGK
Sbjct: 830  ANFEYIDEVQAAAEEAAQKAAAEAKSTLNNSERSNYWEELLKDRYEVHKVEEFNALGKGK 889

Query: 362  RSRK 373
            RSRK
Sbjct: 890  RSRK 893


>ref|XP_002324903.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222866337|gb|EEF03468.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 1334

 Score =  170 bits (431), Expect = 1e-40
 Identities = 84/124 (67%), Positives = 96/124 (77%)
 Frame = +2

Query: 2    IIRYGSKELFADDNDESVKSRQIHYDDAAIDRLLNREHIGXXXXXXXXXXXXGFLKAFKV 181
            IIRYGSKELFAD+NDE+ KSRQIHYDDAAI RLL+RE IG            GFLKAFKV
Sbjct: 774  IIRYGSKELFADENDEAGKSRQIHYDDAAIQRLLDREQIGDEETSLDDEEEDGFLKAFKV 833

Query: 182  ANFEYVDEAELAAEEETPMPPVENRASANNSERATYWEDLLRDKYEVHKIEEFNAMGKGK 361
            ANFEY+DEAE AAE+E     +E + + +NSE+  YWEDLL+D YEVHKIEE NA+GKGK
Sbjct: 834  ANFEYIDEAEAAAEKEAQKAAMETKTTISNSEKTNYWEDLLKDSYEVHKIEESNALGKGK 893

Query: 362  RSRK 373
            RSRK
Sbjct: 894  RSRK 897


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